Protein–RNA interactions for Protein: P47148

YJR111C, Uncharacterized protein YJR111C, yeastyeast

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR111CP47148 NSR1YGR159C 1245 nt16.89■□□□□ 0.29
YJR111CP47148 YML009W-BYML009W-B 477 nt16.45■□□□□ 0.22
YJR111CP47148 NOP1YDL014W 984 nt15.72■□□□□ 0.11
YJR111CP47148 MDJ1YFL016C 1536 nt15.57■□□□□ 0.08
YJR111CP47148 YJL027CYJL027C 417 nt14.27□□□□□ -0.13
YJR111CP47148 YKL036CYKL036C 393 nt13.98□□□□□ -0.17
YJR111CP47148 SRX1YKL086W 384 nt13.79□□□□□ -0.2
YJR111CP47148 Q0297Q0297 156 nt13.63□□□□□ -0.23
YJR111CP47148 DBP2YNL112W 1641 nt13.61□□□□□ -0.23
YJR111CP47148 YBR190WYBR190W 312 nt13.42□□□□□ -0.26
YJR111CP47148 SSA3YBL075C 1950 nt13.36□□□□□ -0.27
YJR111CP47148 RTC3YHR087W 336 nt13.03□□□□□ -0.32
YJR111CP47148 YCR051WYCR051W 669 nt12.99□□□□□ -0.33
YJR111CP47148 TRN1tP(UGG)A 72 nt12.84□□□□□ -0.35
YJR111CP47148 SUF9tP(UGG)F 72 nt12.84□□□□□ -0.35
YJR111CP47148 SUF8tP(UGG)H 72 nt12.84□□□□□ -0.35
YJR111CP47148 tP(UGG)LtP(UGG)L 72 nt12.84□□□□□ -0.35
YJR111CP47148 SUF7tP(UGG)M 72 nt12.84□□□□□ -0.35
YJR111CP47148 tP(UGG)N1tP(UGG)N1 72 nt12.84□□□□□ -0.35
YJR111CP47148 tP(UGG)N2tP(UGG)N2 72 nt12.84□□□□□ -0.35
YJR111CP47148 tP(UGG)O1tP(UGG)O1 72 nt12.84□□□□□ -0.35
YJR111CP47148 SUF11tP(UGG)O2 72 nt12.84□□□□□ -0.35
YJR111CP47148 PUT4YOR348C 1884 nt12.71□□□□□ -0.37
YJR111CP47148 CCC1YLR220W 969 nt12.64□□□□□ -0.39
YJR111CP47148 RVS167YDR388W 1449 nt12.52□□□□□ -0.41
YJR111CP47148 SCS3YGL126W 1143 nt12.45□□□□□ -0.42
YJR111CP47148 SCJ1YMR214W 1134 nt12.44□□□□□ -0.42
YJR111CP47148 ARE1YCR048W 1833 nt12.29□□□□□ -0.44
YJR111CP47148 RPP1BYDL130W 321 nt12.22□□□□□ -0.45
YJR111CP47148 POA1YBR022W 534 nt12.21□□□□□ -0.45
YJR111CP47148 YOL085CYOL085C 342 nt12.16□□□□□ -0.46
YJR111CP47148 SPT5YML010W 3192 nt12.1□□□□□ -0.47
YJR111CP47148 YHR049C-AYHR049C-A 297 nt12.08□□□□□ -0.48
YJR111CP47148 BSC6YOL137W 1494 nt12.08□□□□□ -0.48
YJR111CP47148 SAH1YER043C 1350 nt12.06□□□□□ -0.48
YJR111CP47148 PKP1YIL042C 1185 nt12.03□□□□□ -0.48
YJR111CP47148 URN1YPR152C 1398 nt12.03□□□□□ -0.48
YJR111CP47148 OPI9YLR338W 858 nt12□□□□□ -0.49
YJR111CP47148 SHR5YOL110W 714 nt11.99□□□□□ -0.49
YJR111CP47148 tP(UGG)O3tP(UGG)O3 72 nt11.94□□□□□ -0.5
YJR111CP47148 SSA4YER103W 1929 nt11.87□□□□□ -0.51
YJR111CP47148 DEP1YAL013W 1218 nt11.84□□□□□ -0.51
YJR111CP47148 PET122YER153C 765 nt11.76□□□□□ -0.53
YJR111CP47148 BUD23YCR047C 828 nt11.71□□□□□ -0.53
YJR111CP47148 RPN10YHR200W 807 nt11.66□□□□□ -0.54
YJR111CP47148 PUN1YLR414C 792 nt11.61□□□□□ -0.55
YJR111CP47148 YNL208WYNL208W 600 nt11.59□□□□□ -0.55
YJR111CP47148 PTC2YER089C 1395 nt11.58□□□□□ -0.56
YJR111CP47148 YDJ1YNL064C 1230 nt11.55□□□□□ -0.56
YJR111CP47148 BDF1YLR399C 2061 nt11.53□□□□□ -0.56
YJR111CP47148 NAB2YGL122C 1578 nt11.52□□□□□ -0.57
YJR111CP47148 YJR018WYJR018W 363 nt11.43□□□□□ -0.58
YJR111CP47148 MEP2YNL142W 1500 nt11.4□□□□□ -0.58
YJR111CP47148 SCR1SCR1 522 nt11.4□□□□□ -0.58
YJR111CP47148 GAR1YHR089C 618 nt11.37□□□□□ -0.59
YJR111CP47148 RRN5YLR141W 1092 nt11.35□□□□□ -0.59
YJR111CP47148 TAT1YBR069C 1860 nt11.35□□□□□ -0.59
YJR111CP47148 FIS1YIL065C 468 nt11.33□□□□□ -0.6
YJR111CP47148 DAL1YIR027C 1383 nt11.25□□□□□ -0.61
YJR111CP47148 YJR120WYJR120W 351 nt11.23□□□□□ -0.61
YJR111CP47148 DCW1YKL046C 1350 nt11.22□□□□□ -0.61
YJR111CP47148 FPS1YLL043W 2010 nt11.2□□□□□ -0.62
YJR111CP47148 YPS1YLR120C 1710 nt11.18□□□□□ -0.62
YJR111CP47148 SSA1YAL005C 1929 nt11.16□□□□□ -0.62
YJR111CP47148 PHO4YFR034C 939 nt11.16□□□□□ -0.62
YJR111CP47148 FPR4YLR449W 1179 nt11.15□□□□□ -0.62
YJR111CP47148 NVJ2YPR091C 2313 nt11.13□□□□□ -0.63
YJR111CP47148 YER088W-BYER088W-B 147 nt11.13□□□□□ -0.63
YJR111CP47148 INM2YDR287W 879 nt11.09□□□□□ -0.63
YJR111CP47148 YBR220CYBR220C 1683 nt11.08□□□□□ -0.64
YJR111CP47148 EMI2YDR516C 1503 nt11.04□□□□□ -0.64
YJR111CP47148 YHR165W-AYHR165W-A 312 nt11.03□□□□□ -0.64
YJR111CP47148 PAC11YDR488C 1602 nt11.02□□□□□ -0.64
YJR111CP47148 TIR1YER011W 765 nt11.02□□□□□ -0.65
YJR111CP47148 YDR095CYDR095C 411 nt11.01□□□□□ -0.65
YJR111CP47148 RPP2BYDR382W 333 nt10.99□□□□□ -0.65
YJR111CP47148 ATS1YAL020C 1002 nt10.97□□□□□ -0.65
YJR111CP47148 YMR090WYMR090W 684 nt10.94□□□□□ -0.66
YJR111CP47148 YDL221WYDL221W 552 nt10.91□□□□□ -0.66
YJR111CP47148 SDH1YKL148C 1923 nt10.9□□□□□ -0.66
YJR111CP47148 RSB1YOR049C 1065 nt10.9□□□□□ -0.66
YJR111CP47148 YBL100CYBL100C 315 nt10.89□□□□□ -0.67
YJR111CP47148 CAC2YML102W 1407 nt10.88□□□□□ -0.67
YJR111CP47148 PTP1YDL230W 1008 nt10.87□□□□□ -0.67
YJR111CP47148 SRB2YHR041C 633 nt10.82□□□□□ -0.68
YJR111CP47148 PCH2YBR186W 1695 nt10.79□□□□□ -0.68
YJR111CP47148 RPP2AYOL039W 321 nt10.78□□□□□ -0.68
YJR111CP47148 GUT2YIL155C 1950 nt10.77□□□□□ -0.69
YJR111CP47148 FUN26YAL022C 1554 nt10.76□□□□□ -0.69
YJR111CP47148 SCC4YER147C 1875 nt10.73□□□□□ -0.69
YJR111CP47148 BDH2YAL061W 1254 nt10.73□□□□□ -0.69
YJR111CP47148 IRC15YPL017C 1500 nt10.72□□□□□ -0.69
YJR111CP47148 SEC11YIR022W 504 nt10.71□□□□□ -0.69
YJR111CP47148 ALF1YNL148C 765 nt10.67□□□□□ -0.7
YJR111CP47148 PIB2YGL023C 1908 nt10.66□□□□□ -0.7
YJR111CP47148 GIS3YLR094C 1509 nt10.64□□□□□ -0.71
YJR111CP47148 SIS1YNL007C 1059 nt10.61□□□□□ -0.71
YJR111CP47148 TRM9YML014W 840 nt10.6□□□□□ -0.71
YJR111CP47148 CCT6YDR188W 1641 nt10.57□□□□□ -0.72
YJR111CP47148 YSC84YHR016C 1407 nt10.56□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms