RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	YHL044W	P38727	235 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	LSM12	P38828	187 aa	Known RBP	5.29	□□□□□ -1.56
TIF1	YKR059W	PRM5	P40476	318 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	FSH2	Q05015	223 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	NIP7	Q08962	181 aa	Known RBP	5.29	□□□□□ -1.56
TIF1	YKR059W	SNU23	Q12368	194 aa	Predicted RBP	5.29	□□□□□ -1.56
TIF1	YKR059W	MIR1	P23641	311 aa	Known RBP	5.28	□□□□□ -1.56
TIF1	YKR059W	PTC1	P35182	281 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	ECM4	P36156	370 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	MRPL17	P36528	281 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	YBR220C	P38318	560 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	YJL213W	P40896	331 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	WSC2	P53832	503 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	CWC25	P53854	179 aa	Known RBP	5.28	□□□□□ -1.56
TIF1	YKR059W	MHR1	Q06630	226 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	IRC19	Q07843	230 aa		5.28	□□□□□ -1.56
TIF1	YKR059W	TMC1	Q08422	150 aa	Predicted RBP	5.28	□□□□□ -1.56
TIF1	YKR059W	HHF1	P02309	103 aa	Known RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	YMR31	P19955	123 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	RNA14	P25298	677 aa	Known RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
TIF1	YKR059W	YPC1	P38298	316 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	YHR180W	P38868	163 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	RGI1	P40043	161 aa	Predicted RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	YFR057W	P43625	151 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	SBH2	P52871	88 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	USE1	P53146	245 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	MSO1	P53604	210 aa	Known RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	IGO1	P53897	168 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	ASI3	P53983	676 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	PET191	Q02772	108 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	BRX1	Q08235	291 aa	Known RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	SME1	Q12330	94 aa	Predicted RBP	5.27	□□□□□ -1.57
TIF1	YKR059W	CMC2	Q3E7A4	109 aa		5.27	□□□□□ -1.57
TIF1	YKR059W	CYC3	P06182	269 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	MSI1	P13712	422 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	PEX22	P39718	180 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	VHT1	P53241	593 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	GMC1	Q04399	608 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	NSL1	Q12143	216 aa		5.26	□□□□□ -1.57
TIF1	YKR059W	YAL064W-B	O13512	126 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	CCW14	O13547	238 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	CPR4	P25334	318 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	YCR043C	P25361	127 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	RPB9	P27999	122 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	GPX1	P36014	167 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	RCK1	P38622	512 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	ERG28	P40030	148 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	SNM1	P40993	198 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	SIP18	P50263	79 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	YNL095C	P53932	642 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	SCS7	Q03529	384 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	RCE1	Q03530	315 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	DPP1	Q05521	289 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	GGA1	Q06336	557 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	MFG1	Q07684	458 aa		5.25	□□□□□ -1.57
TIF1	YKR059W	SAL1	D6W196	494 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	MRPL20	P22354	195 aa	Predicted RBP	5.24	□□□□□ -1.57
TIF1	YKR059W	FZO1	P38297	855 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	YND1	P40009	630 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	YGR201C	P42936	225 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	COS10	P52924	374 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	MTM1	P53320	366 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	PEX30	Q06169	523 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	COQ10	Q08058	207 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	RRS1	Q08746	203 aa	Known RBP	5.24	□□□□□ -1.57
TIF1	YKR059W	SFM1	Q12314	213 aa		5.24	□□□□□ -1.57
TIF1	YKR059W	CMK2	P22517	447 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	QRI5	P32344	111 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	YNL194C	P40169	301 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	YIR020C	P40575	100 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	COS6	P53344	381 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	SEC13	Q04491	297 aa	Known RBP	5.23	□□□□□ -1.57
TIF1	YKR059W	TAZ1	Q06510	381 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	YCT1	Q12235	531 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	JID1	Q12350	301 aa		5.23	□□□□□ -1.57
TIF1	YKR059W	ERD2	P18414	219 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	RPC19	P28000	142 aa	Known RBP	5.22	□□□□□ -1.57
TIF1	YKR059W	ANR2	P36090	516 aa	Predicted RBP	5.22	□□□□□ -1.57
TIF1	YKR059W	ECM34	P38728	170 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	RTC3	P38804	111 aa	Predicted RBP	5.22	□□□□□ -1.57
TIF1	YKR059W	YER084W	P40057	128 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	YER188W	P40103	239 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	YGL235W	P53071	178 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	MPC1	P53157	130 aa	Known RBP	5.22	□□□□□ -1.57
TIF1	YKR059W	GET1	P53192	235 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	CRZ1	P53968	678 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	FMN1	Q03778	218 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	YPR127W	Q06494	345 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	SRL1	Q08673	210 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	VIK1	Q12045	647 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	ATP16	Q12165	160 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	YOR343C	Q12484	108 aa		5.22	□□□□□ -1.57
TIF1	YKR059W	HTB1	P02293	131 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	HTB2	P02294	131 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	RPL35A	P0CX84	120 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	RPL35B	P0CX85	120 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	PEX3	P28795	441 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	CAM1	P29547	415 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	ATP7	P30902	174 aa		5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms