Protein–RNA interactions for Protein: P53071

YGL235W, Uncharacterized protein YGL235W, yeastyeast

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGL235WP53071 YML009W-BYML009W-B 477 nt18.5■□□□□ 0.55
YGL235WP53071 NSR1YGR159C 1245 nt18.49■□□□□ 0.55
YGL235WP53071 NOP1YDL014W 984 nt17.89■□□□□ 0.45
YGL235WP53071 MDJ1YFL016C 1536 nt16.62■□□□□ 0.25
YGL235WP53071 YKL036CYKL036C 393 nt16.33■□□□□ 0.2
YGL235WP53071 SRX1YKL086W 384 nt15.6■□□□□ 0.09
YGL235WP53071 Q0297Q0297 156 nt15.56■□□□□ 0.08
YGL235WP53071 YJL027CYJL027C 417 nt15.33■□□□□ 0.04
YGL235WP53071 YCR051WYCR051W 669 nt14.86□□□□□ -0.03
YGL235WP53071 SCS3YGL126W 1143 nt14.75□□□□□ -0.05
YGL235WP53071 DBP2YNL112W 1641 nt14.58□□□□□ -0.08
YGL235WP53071 TRN1tP(UGG)A 72 nt14.19□□□□□ -0.14
YGL235WP53071 SUF9tP(UGG)F 72 nt14.19□□□□□ -0.14
YGL235WP53071 SUF8tP(UGG)H 72 nt14.19□□□□□ -0.14
YGL235WP53071 tP(UGG)LtP(UGG)L 72 nt14.19□□□□□ -0.14
YGL235WP53071 SUF7tP(UGG)M 72 nt14.19□□□□□ -0.14
YGL235WP53071 tP(UGG)N1tP(UGG)N1 72 nt14.19□□□□□ -0.14
YGL235WP53071 tP(UGG)N2tP(UGG)N2 72 nt14.19□□□□□ -0.14
YGL235WP53071 tP(UGG)O1tP(UGG)O1 72 nt14.19□□□□□ -0.14
YGL235WP53071 SUF11tP(UGG)O2 72 nt14.19□□□□□ -0.14
YGL235WP53071 YBR190WYBR190W 312 nt14.19□□□□□ -0.14
YGL235WP53071 CCC1YLR220W 969 nt14.16□□□□□ -0.14
YGL235WP53071 YOL085CYOL085C 342 nt14.14□□□□□ -0.15
YGL235WP53071 PKP1YIL042C 1185 nt14□□□□□ -0.17
YGL235WP53071 RPP1BYDL130W 321 nt13.98□□□□□ -0.17
YGL235WP53071 RTC3YHR087W 336 nt13.94□□□□□ -0.18
YGL235WP53071 RVS167YDR388W 1449 nt13.72□□□□□ -0.21
YGL235WP53071 SCJ1YMR214W 1134 nt13.57□□□□□ -0.24
YGL235WP53071 tP(UGG)O3tP(UGG)O3 72 nt13.4□□□□□ -0.26
YGL235WP53071 PET122YER153C 765 nt13.39□□□□□ -0.27
YGL235WP53071 SCR1SCR1 522 nt13.22□□□□□ -0.29
YGL235WP53071 SHR5YOL110W 714 nt13.17□□□□□ -0.3
YGL235WP53071 ATS1YAL020C 1002 nt13.15□□□□□ -0.3
YGL235WP53071 RRN5YLR141W 1092 nt13.01□□□□□ -0.33
YGL235WP53071 PUT4YOR348C 1884 nt12.99□□□□□ -0.33
YGL235WP53071 URN1YPR152C 1398 nt12.94□□□□□ -0.34
YGL235WP53071 DEP1YAL013W 1218 nt12.93□□□□□ -0.34
YGL235WP53071 YDJ1YNL064C 1230 nt12.93□□□□□ -0.34
YGL235WP53071 SAH1YER043C 1350 nt12.77□□□□□ -0.37
YGL235WP53071 OPI9YLR338W 858 nt12.76□□□□□ -0.37
YGL235WP53071 GAR1YHR089C 618 nt12.74□□□□□ -0.37
YGL235WP53071 YER088W-BYER088W-B 147 nt12.73□□□□□ -0.37
YGL235WP53071 ARE1YCR048W 1833 nt12.72□□□□□ -0.37
YGL235WP53071 RPN10YHR200W 807 nt12.7□□□□□ -0.38
YGL235WP53071 RSB1YOR049C 1065 nt12.7□□□□□ -0.38
YGL235WP53071 YNL208WYNL208W 600 nt12.66□□□□□ -0.38
YGL235WP53071 POA1YBR022W 534 nt12.65□□□□□ -0.38
YGL235WP53071 YHR049C-AYHR049C-A 297 nt12.58□□□□□ -0.4
YGL235WP53071 SSA3YBL075C 1950 nt12.51□□□□□ -0.41
YGL235WP53071 PUN1YLR414C 792 nt12.4□□□□□ -0.42
YGL235WP53071 BSC6YOL137W 1494 nt12.37□□□□□ -0.43
YGL235WP53071 BUD23YCR047C 828 nt12.34□□□□□ -0.43
YGL235WP53071 YJR018WYJR018W 363 nt12.34□□□□□ -0.43
YGL235WP53071 PTC2YER089C 1395 nt12.3□□□□□ -0.44
YGL235WP53071 TIR1YER011W 765 nt12.3□□□□□ -0.44
YGL235WP53071 PST2YDR032C 597 nt12.19□□□□□ -0.46
YGL235WP53071 SSA1YAL005C 1929 nt12.17□□□□□ -0.46
YGL235WP53071 NAB2YGL122C 1578 nt12.15□□□□□ -0.46
YGL235WP53071 RPP2BYDR382W 333 nt12.05□□□□□ -0.48
YGL235WP53071 YJR120WYJR120W 351 nt12.05□□□□□ -0.48
YGL235WP53071 FPR4YLR449W 1179 nt12□□□□□ -0.49
YGL235WP53071 DAL1YIR027C 1383 nt11.95□□□□□ -0.5
YGL235WP53071 SRB2YHR041C 633 nt11.92□□□□□ -0.5
YGL235WP53071 INM2YDR287W 879 nt11.91□□□□□ -0.5
YGL235WP53071 FIS1YIL065C 468 nt11.91□□□□□ -0.5
YGL235WP53071 PHO4YFR034C 939 nt11.84□□□□□ -0.51
YGL235WP53071 SPT5YML010W 3192 nt11.8□□□□□ -0.52
YGL235WP53071 YBL100CYBL100C 315 nt11.78□□□□□ -0.52
YGL235WP53071 SHU1YHL006C 453 nt11.76□□□□□ -0.53
YGL235WP53071 BDH2YAL061W 1254 nt11.75□□□□□ -0.53
YGL235WP53071 WWM1YFL010C 636 nt11.74□□□□□ -0.53
YGL235WP53071 YAL037C-BYAL037C-B 975 nt11.7□□□□□ -0.54
YGL235WP53071 YPS1YLR120C 1710 nt11.65□□□□□ -0.54
YGL235WP53071 YKL097CYKL097C 411 nt11.64□□□□□ -0.55
YGL235WP53071 FUN26YAL022C 1554 nt11.62□□□□□ -0.55
YGL235WP53071 MEP2YNL142W 1500 nt11.61□□□□□ -0.55
YGL235WP53071 YHR165W-AYHR165W-A 312 nt11.6□□□□□ -0.55
YGL235WP53071 TRM9YML014W 840 nt11.6□□□□□ -0.55
YGL235WP53071 YGR021WYGR021W 873 nt11.58□□□□□ -0.56
YGL235WP53071 LSM3YLR438C-A 270 nt11.55□□□□□ -0.56
YGL235WP53071 SSA4YER103W 1929 nt11.53□□□□□ -0.56
YGL235WP53071 YDR095CYDR095C 411 nt11.53□□□□□ -0.56
YGL235WP53071 ALF1YNL148C 765 nt11.53□□□□□ -0.56
YGL235WP53071 YFL021C-AYFL021C-A 855 nt11.52□□□□□ -0.57
YGL235WP53071 HOM6YJR139C 1080 nt11.52□□□□□ -0.57
YGL235WP53071 MNP1YGL068W 585 nt11.47□□□□□ -0.57
YGL235WP53071 DCW1YKL046C 1350 nt11.45□□□□□ -0.58
YGL235WP53071 CCT6YDR188W 1641 nt11.42□□□□□ -0.58
YGL235WP53071 SUF2tP(AGG)C 72 nt11.38□□□□□ -0.59
YGL235WP53071 SUF10tP(AGG)N 72 nt11.38□□□□□ -0.59
YGL235WP53071 RKM5YLR137W 1104 nt11.36□□□□□ -0.59
YGL235WP53071 RPP2AYOL039W 321 nt11.36□□□□□ -0.59
YGL235WP53071 EMI2YDR516C 1503 nt11.3□□□□□ -0.6
YGL235WP53071 SIS1YNL007C 1059 nt11.3□□□□□ -0.6
YGL235WP53071 PTP1YDL230W 1008 nt11.29□□□□□ -0.6
YGL235WP53071 CAC2YML102W 1407 nt11.26□□□□□ -0.61
YGL235WP53071 YMR090WYMR090W 684 nt11.26□□□□□ -0.61
YGL235WP53071 YDL221WYDL221W 552 nt11.19□□□□□ -0.62
YGL235WP53071 YOR139CYOR139C 393 nt11.18□□□□□ -0.62
YGL235WP53071 NPL3YDR432W 1245 nt11.17□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms