RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W FEX2Q08991 375 aa5.49□□□□□ -1.53
LDB16YCL005W COX17Q12287 69 aa5.49□□□□□ -1.53
LDB16YCL005W EAF3Q12432 401 aa5.49□□□□□ -1.53
LDB16YCL005W TPI1P00942 248 aaKnown RBP5.48□□□□□ -1.53
LDB16YCL005W SEN2P16658 377 aa5.48□□□□□ -1.53
LDB16YCL005W OLE1P21147 510 aaKnown RBP5.48□□□□□ -1.53
LDB16YCL005W MIR1P23641 311 aaKnown RBP5.48□□□□□ -1.53
LDB16YCL005W MRP20P32387 263 aa5.48□□□□□ -1.53
LDB16YCL005W VMA8P32610 256 aaKnown RBP5.48□□□□□ -1.53
LDB16YCL005W CLB6P32943 380 aa5.48□□□□□ -1.53
LDB16YCL005W FAT1P38225 669 aa5.48□□□□□ -1.53
LDB16YCL005W PIG2P40187 538 aa5.48□□□□□ -1.53
LDB16YCL005W YIR035CP40579 254 aa5.48□□□□□ -1.53
LDB16YCL005W YIP5P53108 310 aa5.48□□□□□ -1.53
LDB16YCL005W DID2P69771 204 aa5.48□□□□□ -1.53
LDB16YCL005W YPL077CQ02831 240 aa5.48□□□□□ -1.53
LDB16YCL005W YDC1Q02896 317 aa5.48□□□□□ -1.53
LDB16YCL005W NOC4Q06512 552 aaPredicted RBP5.48□□□□□ -1.53
LDB16YCL005W AEP3Q12089 606 aa5.48□□□□□ -1.53
LDB16YCL005W NCE102Q12207 173 aaRIP-Chip data5.48□□□□□ -1.53not detected
LDB16YCL005W YBR085C-AO43137 85 aa5.47□□□□□ -1.53
LDB16YCL005W QCR2P07257 368 aa5.47□□□□□ -1.53
LDB16YCL005W OCH1P31755 480 aa5.47□□□□□ -1.53
LDB16YCL005W GLC7P32598 312 aaKnown RBP5.47□□□□□ -1.53
LDB16YCL005W PRS2P38620 318 aaKnown RBP5.47□□□□□ -1.53
LDB16YCL005W SEN34P39707 275 aa5.47□□□□□ -1.53
LDB16YCL005W CCS1P40202 249 aaKnown RBP5.47□□□□□ -1.53
LDB16YCL005W RPL13BP40212 199 aaKnown RBP5.47□□□□□ -1.53
LDB16YCL005W EGT2P42835 1041 aa5.47□□□□□ -1.53
LDB16YCL005W MRX5P47007 382 aa5.47□□□□□ -1.53
LDB16YCL005W TAD2P47058 250 aa5.47□□□□□ -1.53
LDB16YCL005W SOL1P50278 321 aa5.47□□□□□ -1.53
LDB16YCL005W SLX9P53251 210 aaPredicted RBP5.47□□□□□ -1.53
LDB16YCL005W ACS1Q01574 713 aa5.47□□□□□ -1.53
LDB16YCL005W MEH1Q02205 184 aa5.47□□□□□ -1.53
LDB16YCL005W THI74Q04083 370 aa5.47□□□□□ -1.53
LDB16YCL005W YMR254CQ04838 102 aa5.47□□□□□ -1.53
LDB16YCL005W YDR286CQ05530 114 aa5.47□□□□□ -1.53
LDB16YCL005W ANT1Q06497 328 aa5.47□□□□□ -1.53
LDB16YCL005W TFC7Q12415 435 aa5.47□□□□□ -1.53
LDB16YCL005W LAS17Q12446 633 aa5.47□□□□□ -1.53
LDB16YCL005W RPL13AQ12690 199 aaPredicted RBP5.47□□□□□ -1.53
LDB16YCL005W YLR365WQ7LIF2 110 aa5.47□□□□□ -1.53
LDB16YCL005W ATG40Q99325 256 aa5.47□□□□□ -1.53
LDB16YCL005W SEC22P22214 214 aa5.46□□□□□ -1.54
LDB16YCL005W TIP1P27654 210 aaPredicted RBP5.46□□□□□ -1.54
LDB16YCL005W PDC2P32896 925 aa5.46□□□□□ -1.54
LDB16YCL005W SHM2P37291 469 aaKnown RBP5.46□□□□□ -1.54
LDB16YCL005W LNP1P38878 278 aa5.46□□□□□ -1.54
LDB16YCL005W RPA34P47006 233 aaPredicted RBP5.46□□□□□ -1.54
LDB16YCL005W YJR111CP47148 283 aaKnown RBP5.46□□□□□ -1.54
LDB16YCL005W UBC13P52490 153 aa5.46□□□□□ -1.54
LDB16YCL005W ACT1P60010 375 aaKnown RBP5.46□□□□□ -1.54
LDB16YCL005W GRC3Q07845 632 aa5.46□□□□□ -1.54
LDB16YCL005W YCT1Q12235 531 aa5.46□□□□□ -1.54
LDB16YCL005W RNH203Q12338 110 aa5.46□□□□□ -1.54
LDB16YCL005W YJR112W-AQ3E743 109 aa5.46□□□□□ -1.54
LDB16YCL005W ISN1Q99312 450 aa5.46□□□□□ -1.54
LDB16YCL005W PRP8P33334 2413 aaKnown RBP5.45□□□□□ -1.54
LDB16YCL005W MAK32P23060 363 aa5.45□□□□□ -1.54
LDB16YCL005W IMP1P28627 190 aa5.45□□□□□ -1.54
LDB16YCL005W RPB7P34087 171 aa5.45□□□□□ -1.54
LDB16YCL005W SWD2P36104 329 aaPredicted RBP5.45□□□□□ -1.54
LDB16YCL005W SWD3P38123 315 aa5.45□□□□□ -1.54
LDB16YCL005W SSO2P39926 295 aa5.45□□□□□ -1.54
LDB16YCL005W TAF4P50105 388 aa5.45□□□□□ -1.54
LDB16YCL005W UBC12P52491 188 aa5.45□□□□□ -1.54
LDB16YCL005W PNC1P53184 216 aaKnown RBP5.45□□□□□ -1.54
LDB16YCL005W YPL067CQ02754 198 aa5.45□□□□□ -1.54
LDB16YCL005W UPS1Q05776 175 aa5.45□□□□□ -1.54
LDB16YCL005W FRE8Q12209 686 aa5.45□□□□□ -1.54
LDB16YCL005W PRS5Q12265 496 aaKnown RBP5.45□□□□□ -1.54
LDB16YCL005W MPD1Q12404 318 aaKnown RBP5.45□□□□□ -1.54
LDB16YCL005W YLR146W-AQ2V2P1 62 aa5.45□□□□□ -1.54
LDB16YCL005W SSA3P09435 649 aaKnown RBP5.44□□□□□ -1.54
LDB16YCL005W FUS3P16892 353 aaKnown RBP5.44□□□□□ -1.54
LDB16YCL005W YUH1P35127 236 aa5.44□□□□□ -1.54
LDB16YCL005W NTC20P38302 140 aaPredicted RBP5.44□□□□□ -1.54
LDB16YCL005W GPI16P38875 610 aa5.44□□□□□ -1.54
LDB16YCL005W ASP1P38986 381 aaPredicted RBP5.44□□□□□ -1.54
LDB16YCL005W POP2P39008 433 aa5.44□□□□□ -1.54
LDB16YCL005W GCV3P39726 170 aaPredicted RBP5.44□□□□□ -1.54
LDB16YCL005W YHC3P47040 408 aa5.44□□□□□ -1.54
LDB16YCL005W SRB7P47822 140 aa5.44□□□□□ -1.54
LDB16YCL005W PHO23P50947 330 aa5.44□□□□□ -1.54
LDB16YCL005W PKP2P53170 491 aa5.44□□□□□ -1.54
LDB16YCL005W TEX1P53851 422 aaKnown RBP5.44□□□□□ -1.54
LDB16YCL005W TIM44Q01852 431 aa5.44□□□□□ -1.54
LDB16YCL005W VPS28Q02767 242 aa5.44□□□□□ -1.54
LDB16YCL005W RRT7Q07829 113 aa5.44□□□□□ -1.54
LDB16YCL005W FCF2Q12035 217 aaPredicted RBP5.44□□□□□ -1.54
LDB16YCL005W FCY22Q12119 530 aa5.44□□□□□ -1.54
LDB16YCL005W YPR108W-AQ3E7B3 70 aa5.44□□□□□ -1.54
LDB16YCL005W IPP1P00817 287 aaKnown RBP5.43□□□□□ -1.54
LDB16YCL005W ERV15P38312 142 aa5.43□□□□□ -1.54
LDB16YCL005W YBR220CP38318 560 aa5.43□□□□□ -1.54
LDB16YCL005W YHL037CP38733 133 aa5.43□□□□□ -1.54
LDB16YCL005W LSM12P38828 187 aaKnown RBP5.43□□□□□ -1.54
LDB16YCL005W PAC2P39937 518 aa5.43□□□□□ -1.54
LDB16YCL005W GPP2P40106 250 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms