RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	MATALPHA1	P0CY06	175 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	HMLALPHA1	P0CY07	175 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	ZRC1	P20107	442 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	PCL1	P24867	279 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	LDS1	P31379	325 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	ARO4	P32449	370 aa	Known RBP	4.8	□□□□□ -1.64
HFI1	YPL254W	ECM25	P32525	599 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	YBL010C	P32788	280 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	GPX1	P36014	167 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	BAT1	P38891	393 aa	Known RBP	4.8	□□□□□ -1.64
HFI1	YPL254W	ELO1	P39540	310 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	YIL152W	P40455	235 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	YJR141W	P47172	347 aa	Predicted RBP	4.8	□□□□□ -1.64
HFI1	YPL254W	NIF3	P53081	288 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	SCW4	P53334	386 aa	Known RBP	4.8	□□□□□ -1.64
HFI1	YPL254W	YML018C	Q03730	393 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	BNA7	Q04066	261 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	PRP46	Q12417	451 aa	Predicted RBP	4.8	□□□□□ -1.64
HFI1	YPL254W	ERP4	Q12450	207 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	YOR343C	Q12484	108 aa		4.8	□□□□□ -1.64
HFI1	YPL254W	YSF3	P0C074	85 aa	Predicted RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	UBI4	P0CG63	381 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	RPL40A	P0CH08	128 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	RPL40B	P0CH09	128 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	MRS4	P23500	304 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	CPR4	P25334	318 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	KRR1	P25586	316 aa	Predicted RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	STP22	P25604	385 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	VMA5	P31412	392 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	HSP150	P32478	413 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	SNC2	P33328	115 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	MSN4	P33749	630 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	YKL162C	P36052	402 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	DLS1	P40366	167 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	EMC5	P40540	141 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	CTK2	P46962	323 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	SSN8	P47821	323 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	PNC1	P53184	216 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	YGR066C	P53242	292 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	HHO1	P53551	258 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	SWS2	P53937	143 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	YDR248C	Q03786	193 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	MRPL1	Q04599	285 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	PAL1	Q05518	499 aa	Known RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	SEI1	Q06058	285 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	BSC6	Q08280	497 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	FCF2	Q12035	217 aa	Predicted RBP	4.79	□□□□□ -1.64
HFI1	YPL254W	ATX2	Q12067	313 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	MCP1	Q12106	302 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	RLM1	Q12224	676 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	SET6	Q12529	373 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	YPR145C-A	Q2V2P0	78 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	YLR146W-A	Q2V2P1	62 aa		4.79	□□□□□ -1.64
HFI1	YPL254W	TDH1	P00360	332 aa	Known RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	ARF1	P11076	181 aa	Known RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	CTA1	P15202	515 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	MEK1	P24719	497 aa	Predicted RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	SRP102	P36057	244 aa	Predicted RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	SRX1	P36077	127 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	FIG1	P38224	298 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	UMP1	P38293	148 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	PRS3	P38689	320 aa	Known RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	MRX5	P47007	382 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	SEH1	P53011	349 aa	Known RBP	4.78	□□□□□ -1.64
HFI1	YPL254W	MTM1	P53320	366 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	CAB5	Q03941	241 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	HMS1	Q12398	434 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	FAB1	P34756	2278 aa		4.78	□□□□□ -1.64
HFI1	YPL254W	NAM2	P11325	894 aa		4.77	□□□□□ -1.65
HFI1	YPL254W	AIM17	P23180	465 aa	Known RBP	4.77	□□□□□ -1.65
HFI1	YPL254W	MSK1	P32048	576 aa		4.77	□□□□□ -1.65
HFI1	YPL254W	IKI1	P38874	309 aa		4.77	□□□□□ -1.65
HFI1	YPL254W	SEC24	P40482	926 aa	Known RBP	4.77	□□□□□ -1.65
HFI1	YPL254W	ERJ5	P43613	295 aa	Predicted RBP	4.77	□□□□□ -1.65
HFI1	YPL254W	MOG1	P47123	218 aa		4.77	□□□□□ -1.65
HFI1	YPL254W	SRB7	P47822	140 aa		4.77	□□□□□ -1.65
HFI1	YPL254W	ACT1	P60010	375 aa	Known RBP	4.77	□□□□□ -1.65
HFI1	YPL254W	HNT1	Q04344	158 aa	Known RBP	4.77	□□□□□ -1.65
HFI1	YPL254W	YFR010W-A	P0C5N0	62 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	APA2	P22108	325 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	ERG3	P32353	365 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	YPC1	P38298	316 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	ARC40	P38328	384 aa	Known RBP	4.76	□□□□□ -1.65
HFI1	YPL254W	RFC2	P40348	353 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	PGD1	P40356	397 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	SPG5	P42933	373 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	YJR056C	P47115	236 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	TRM9	P49957	279 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	PKP2	P53170	491 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	ALG9	P53868	555 aa	Known RBP	4.76	□□□□□ -1.65
HFI1	YPL254W	RNH201	P53942	307 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	SAM50	P53969	484 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	RTT103	Q05543	409 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	NNT1	Q05874	261 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	YLR112W	Q12130	139 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	YRA1	Q12159	226 aa	Known RBP	4.76	□□□□□ -1.65
HFI1	YPL254W	DGK1	Q12382	290 aa		4.76	□□□□□ -1.65
HFI1	YPL254W	YLL053C	P0CD98	152 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	MCM10	P32354	571 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	FRM2	P37261	193 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms