Protein–RNA interactions for Protein: P47172

YJR141W, Uncharacterized protein YJR141W, yeastyeast

Predicted RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR141WP47172 YML009W-BYML009W-B 477 nt18.92■□□□□ 0.62
YJR141WP47172 NSR1YGR159C 1245 nt18.78■□□□□ 0.6
YJR141WP47172 NOP1YDL014W 984 nt18.47■□□□□ 0.55
YJR141WP47172 YKL036CYKL036C 393 nt17.08■□□□□ 0.32
YJR141WP47172 MDJ1YFL016C 1536 nt16.55■□□□□ 0.24
YJR141WP47172 Q0297Q0297 156 nt16.18■□□□□ 0.18
YJR141WP47172 SRX1YKL086W 384 nt16.13■□□□□ 0.17
YJR141WP47172 YJL027CYJL027C 417 nt15.94■□□□□ 0.14
YJR141WP47172 SCS3YGL126W 1143 nt15.56■□□□□ 0.08
YJR141WP47172 YCR051WYCR051W 669 nt15.25■□□□□ 0.03
YJR141WP47172 YOL085CYOL085C 342 nt14.76□□□□□ -0.05
YJR141WP47172 DBP2YNL112W 1641 nt14.69□□□□□ -0.06
YJR141WP47172 TRN1tP(UGG)A 72 nt14.55□□□□□ -0.08
YJR141WP47172 SUF9tP(UGG)F 72 nt14.55□□□□□ -0.08
YJR141WP47172 SUF8tP(UGG)H 72 nt14.55□□□□□ -0.08
YJR141WP47172 tP(UGG)LtP(UGG)L 72 nt14.55□□□□□ -0.08
YJR141WP47172 SUF7tP(UGG)M 72 nt14.55□□□□□ -0.08
YJR141WP47172 tP(UGG)N1tP(UGG)N1 72 nt14.55□□□□□ -0.08
YJR141WP47172 tP(UGG)N2tP(UGG)N2 72 nt14.55□□□□□ -0.08
YJR141WP47172 tP(UGG)O1tP(UGG)O1 72 nt14.55□□□□□ -0.08
YJR141WP47172 SUF11tP(UGG)O2 72 nt14.55□□□□□ -0.08
YJR141WP47172 RPP1BYDL130W 321 nt14.51□□□□□ -0.09
YJR141WP47172 PKP1YIL042C 1185 nt14.48□□□□□ -0.09
YJR141WP47172 CCC1YLR220W 969 nt14.31□□□□□ -0.12
YJR141WP47172 YBR190WYBR190W 312 nt14.16□□□□□ -0.14
YJR141WP47172 SCJ1YMR214W 1134 nt13.94□□□□□ -0.18
YJR141WP47172 ATS1YAL020C 1002 nt13.92□□□□□ -0.18
YJR141WP47172 RVS167YDR388W 1449 nt13.9□□□□□ -0.19
YJR141WP47172 SSA3YBL075C 1950 nt13.87□□□□□ -0.19
YJR141WP47172 PET122YER153C 765 nt13.82□□□□□ -0.2
YJR141WP47172 RTC3YHR087W 336 nt13.79□□□□□ -0.2
YJR141WP47172 tP(UGG)O3tP(UGG)O3 72 nt13.77□□□□□ -0.21
YJR141WP47172 SCR1SCR1 522 nt13.75□□□□□ -0.21
YJR141WP47172 SHR5YOL110W 714 nt13.42□□□□□ -0.26
YJR141WP47172 RRN5YLR141W 1092 nt13.41□□□□□ -0.26
YJR141WP47172 YDJ1YNL064C 1230 nt13.34□□□□□ -0.27
YJR141WP47172 RSB1YOR049C 1065 nt13.17□□□□□ -0.3
YJR141WP47172 YER088W-BYER088W-B 147 nt13.16□□□□□ -0.3
YJR141WP47172 GAR1YHR089C 618 nt12.97□□□□□ -0.33
YJR141WP47172 URN1YPR152C 1398 nt12.95□□□□□ -0.34
YJR141WP47172 DEP1YAL013W 1218 nt12.91□□□□□ -0.34
YJR141WP47172 PST2YDR032C 597 nt12.88□□□□□ -0.35
YJR141WP47172 RPN10YHR200W 807 nt12.85□□□□□ -0.35
YJR141WP47172 YNL208WYNL208W 600 nt12.81□□□□□ -0.36
YJR141WP47172 OPI9YLR338W 858 nt12.78□□□□□ -0.36
YJR141WP47172 PUT4YOR348C 1884 nt12.78□□□□□ -0.36
YJR141WP47172 SAH1YER043C 1350 nt12.63□□□□□ -0.39
YJR141WP47172 ARE1YCR048W 1833 nt12.56□□□□□ -0.4
YJR141WP47172 TIR1YER011W 765 nt12.56□□□□□ -0.4
YJR141WP47172 PUN1YLR414C 792 nt12.44□□□□□ -0.42
YJR141WP47172 YKL097CYKL097C 411 nt12.43□□□□□ -0.42
YJR141WP47172 YHR049C-AYHR049C-A 297 nt12.41□□□□□ -0.42
YJR141WP47172 SSA1YAL005C 1929 nt12.37□□□□□ -0.43
YJR141WP47172 YJR018WYJR018W 363 nt12.37□□□□□ -0.43
YJR141WP47172 POA1YBR022W 534 nt12.34□□□□□ -0.43
YJR141WP47172 SHU1YHL006C 453 nt12.33□□□□□ -0.44
YJR141WP47172 PTC2YER089C 1395 nt12.2□□□□□ -0.46
YJR141WP47172 RPP2BYDR382W 333 nt12.19□□□□□ -0.46
YJR141WP47172 YJR120WYJR120W 351 nt12.18□□□□□ -0.46
YJR141WP47172 SRB2YHR041C 633 nt12.12□□□□□ -0.47
YJR141WP47172 BSC6YOL137W 1494 nt12.09□□□□□ -0.47
YJR141WP47172 BUD23YCR047C 828 nt12.09□□□□□ -0.47
YJR141WP47172 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
YJR141WP47172 YAL037C-BYAL037C-B 975 nt12.06□□□□□ -0.48
YJR141WP47172 YGR021WYGR021W 873 nt12.04□□□□□ -0.48
YJR141WP47172 WWM1YFL010C 636 nt11.98□□□□□ -0.49
YJR141WP47172 HOM6YJR139C 1080 nt11.95□□□□□ -0.5
YJR141WP47172 DAL1YIR027C 1383 nt11.94□□□□□ -0.5
YJR141WP47172 INM2YDR287W 879 nt11.94□□□□□ -0.5
YJR141WP47172 BDH2YAL061W 1254 nt11.94□□□□□ -0.5
YJR141WP47172 FIS1YIL065C 468 nt11.93□□□□□ -0.5
YJR141WP47172 YOR139CYOR139C 393 nt11.88□□□□□ -0.51
YJR141WP47172 YFL021C-AYFL021C-A 855 nt11.87□□□□□ -0.51
YJR141WP47172 MNP1YGL068W 585 nt11.86□□□□□ -0.51
YJR141WP47172 FPR4YLR449W 1179 nt11.85□□□□□ -0.51
YJR141WP47172 YBL100CYBL100C 315 nt11.84□□□□□ -0.51
YJR141WP47172 PHO4YFR034C 939 nt11.82□□□□□ -0.52
YJR141WP47172 NPL3YDR432W 1245 nt11.81□□□□□ -0.52
YJR141WP47172 LSM3YLR438C-A 270 nt11.81□□□□□ -0.52
YJR141WP47172 YOL037CYOL037C 354 nt11.79□□□□□ -0.52
YJR141WP47172 PAC11YDR488C 1602 nt11.78□□□□□ -0.52
YJR141WP47172 RKM5YLR137W 1104 nt11.77□□□□□ -0.53
YJR141WP47172 NVJ2YPR091C 2313 nt11.72□□□□□ -0.53
YJR141WP47172 SSA4YER103W 1929 nt11.72□□□□□ -0.53
YJR141WP47172 FUN26YAL022C 1554 nt11.68□□□□□ -0.54
YJR141WP47172 TRM9YML014W 840 nt11.67□□□□□ -0.54
YJR141WP47172 CCT6YDR188W 1641 nt11.6□□□□□ -0.55
YJR141WP47172 YPS1YLR120C 1710 nt11.57□□□□□ -0.56
YJR141WP47172 SPT5YML010W 3192 nt11.55□□□□□ -0.56
YJR141WP47172 YDR095CYDR095C 411 nt11.52□□□□□ -0.57
YJR141WP47172 SUF2tP(AGG)C 72 nt11.51□□□□□ -0.57
YJR141WP47172 SUF10tP(AGG)N 72 nt11.51□□□□□ -0.57
YJR141WP47172 ALF1YNL148C 765 nt11.51□□□□□ -0.57
YJR141WP47172 FPS1YLL043W 2010 nt11.48□□□□□ -0.57
YJR141WP47172 BDF1YLR399C 2061 nt11.45□□□□□ -0.58
YJR141WP47172 YLR281CYLR281C 468 nt11.44□□□□□ -0.58
YJR141WP47172 YHR165W-AYHR165W-A 312 nt11.42□□□□□ -0.58
YJR141WP47172 tM(CAU)CtM(CAU)C 72 nt11.41□□□□□ -0.58
YJR141WP47172 IMT4tM(CAU)E 72 nt11.41□□□□□ -0.58
YJR141WP47172 IMT3tM(CAU)J3 72 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms