RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C MATALPHA1P0CY06 175 aa2.64□□□□□ -1.99
SPC24YMR117C HMLALPHA1P0CY07 175 aa2.64□□□□□ -1.99
SPC24YMR117C VPS21P36017 210 aaKnown RBP2.64□□□□□ -1.99
SPC24YMR117C YHR180WP38868 163 aa2.64□□□□□ -1.99
SPC24YMR117C BMT5P40493 336 aa2.64□□□□□ -1.99
SPC24YMR117C YKE4P40544 346 aa2.64□□□□□ -1.99
SPC24YMR117C RPC17P47076 161 aa2.64□□□□□ -1.99
SPC24YMR117C ERV29P53337 310 aa2.64□□□□□ -1.99
SPC24YMR117C CDC10P25342 322 aaKnown RBP2.63□□□□□ -1.99
SPC24YMR117C NTF2P33331 125 aaKnown RBP2.63□□□□□ -1.99
SPC24YMR117C VTC1P40046 129 aaRIP-Chip data2.63□□□□□ -1.99not detected
SPC24YMR117C COX15P40086 486 aa2.63□□□□□ -1.99
SPC24YMR117C CYT2Q00873 224 aa2.63□□□□□ -1.99
SPC24YMR117C TPO4Q12256 659 aa2.63□□□□□ -1.99
SPC24YMR117C SPT3P06844 337 aa2.62□□□□□ -1.99
SPC24YMR117C YHR022CP38763 256 aa2.62□□□□□ -1.99
SPC24YMR117C NOP13P53883 403 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SPC24YMR117C YMD8Q03697 442 aa2.62□□□□□ -1.99
SPC24YMR117C YHR139C-AO13536 103 aa2.61□□□□□ -1.99
SPC24YMR117C DSE2P38844 325 aa2.61□□□□□ -1.99
SPC24YMR117C TOS8P53147 276 aa2.61□□□□□ -1.99
SPC24YMR117C LSO2Q3E772 92 aaKnown RBP2.61□□□□□ -1.99
SPC24YMR117C CDC8P00572 216 aa2.6□□□□□ -1.99
SPC24YMR117C MDH2P22133 377 aa2.6□□□□□ -1.99
SPC24YMR117C YER085CP40058 173 aa2.6□□□□□ -1.99
SPC24YMR117C PRE6P40303 254 aaKnown RBP2.6□□□□□ -1.99
SPC24YMR117C PRM10P42946 383 aa2.6□□□□□ -1.99
SPC24YMR117C DID2P69771 204 aa2.6□□□□□ -1.99
SPC24YMR117C CDC7P06243 507 aa2.59□□□□□ -1.99
SPC24YMR117C YPR170W-BP0C5R9 85 aa2.59□□□□□ -1.99
SPC24YMR117C DDI2P0CH63 225 aa2.59□□□□□ -1.99
SPC24YMR117C DDI3P0CH64 225 aa2.59□□□□□ -1.99
SPC24YMR117C SSO1P32867 290 aa2.58□□□□□ -2
SPC24YMR117C DRS2P39524 1355 aa2.58□□□□□ -2
SPC24YMR117C RHO1P06780 209 aaKnown RBP2.57□□□□□ -2
SPC24YMR117C PET9P18239 318 aaKnown RBP2.57□□□□□ -2
SPC24YMR117C RPL24BP24000 155 aaKnown RBP2.57□□□□□ -2
SPC24YMR117C VMA6P32366 345 aaKnown RBP2.57□□□□□ -2
SPC24YMR117C DOG2P38773 246 aa2.57□□□□□ -2
SPC24YMR117C RPL33BP41056 107 aaKnown RBP2.57□□□□□ -2
SPC24YMR117C PSF1Q12488 208 aa2.57□□□□□ -2
SPC24YMR117C URA6P15700 204 aa2.56□□□□□ -2
SPC24YMR117C SVP26P38869 228 aa2.56□□□□□ -2
SPC24YMR117C MIC26P50087 233 aa2.56□□□□□ -2
SPC24YMR117C FYV6P53913 173 aa2.56□□□□□ -2
SPC24YMR117C YNL010WP53981 241 aaKnown RBP2.56□□□□□ -2
SPC24YMR117C CDC123Q05791 360 aa2.56□□□□□ -2
SPC24YMR117C DCN1Q12395 269 aa2.56□□□□□ -2
SPC24YMR117C MEI4P29467 408 aa2.55□□□□□ -2
SPC24YMR117C IRC22P40006 225 aa2.55□□□□□ -2
SPC24YMR117C AGE2P40529 298 aa2.55□□□□□ -2
SPC24YMR117C YNR062CP53748 327 aa2.55□□□□□ -2
SPC24YMR117C TRM12Q04235 462 aa2.55□□□□□ -2
SPC24YMR117C LPP1Q04396 274 aa2.55□□□□□ -2
SPC24YMR117C BMH2P34730 273 aaKnown RBP2.54□□□□□ -2
SPC24YMR117C AVT2P39981 480 aa2.54□□□□□ -2
SPC24YMR117C PGD1P40356 397 aa2.54□□□□□ -2
SPC24YMR117C AIF1P52923 378 aa2.54□□□□□ -2
SPC24YMR117C PRM8P53174 237 aa2.54□□□□□ -2
SPC24YMR117C THP2O13539 261 aaKnown RBP2.53□□□□□ -2
SPC24YMR117C ATG22P25568 528 aa2.53□□□□□ -2
SPC24YMR117C PPA2P28239 310 aa2.53□□□□□ -2
SPC24YMR117C SRY1P36007 326 aa2.53□□□□□ -2
SPC24YMR117C MIC12P38341 106 aa2.53□□□□□ -2
SPC24YMR117C YER135CP40082 130 aa2.53□□□□□ -2
SPC24YMR117C RTR1P40084 226 aaPredicted RBP2.53□□□□□ -2
SPC24YMR117C ICE2P40499 491 aa2.53□□□□□ -2
SPC24YMR117C BUD25P85052 153 aa2.53□□□□□ -2
SPC24YMR117C YMR31P19955 123 aa2.52□□□□□ -2.01
SPC24YMR117C BRR6P53062 197 aa2.52□□□□□ -2.01
SPC24YMR117C REP2P03872 296 aa2.51□□□□□ -2.01
SPC24YMR117C TIR3P40552 269 aa2.51□□□□□ -2.01
SPC24YMR117C SPG3Q04398 127 aaPredicted RBP2.51□□□□□ -2.01
SPC24YMR117C CDC28P00546 298 aaKnown RBP2.5□□□□□ -2.01
SPC24YMR117C YOL162WP0CF19 215 aa2.5□□□□□ -2.01
SPC24YMR117C POP4P38336 279 aa2.5□□□□□ -2.01
SPC24YMR117C URA8P38627 578 aaPredicted RBP2.5□□□□□ -2.01
SPC24YMR117C OTU1P43558 301 aa2.5□□□□□ -2.01
SPC24YMR117C SNZ1Q03148 297 aa2.5□□□□□ -2.01
SPC24YMR117C YDR248CQ03786 193 aa2.5□□□□□ -2.01
SPC24YMR117C SML1Q04964 104 aa2.5□□□□□ -2.01
SPC24YMR117C SEY1Q99287 776 aa2.5□□□□□ -2.01
SPC24YMR117C MRPS28P21771 286 aa2.49□□□□□ -2.01
SPC24YMR117C YBR219CP38317 127 aa2.49□□□□□ -2.01
SPC24YMR117C YRB1P41920 201 aaKnown RBP2.49□□□□□ -2.01
SPC24YMR117C BXI1P48558 297 aa2.49□□□□□ -2.01
SPC24YMR117C ALG13P53178 202 aa2.49□□□□□ -2.01
SPC24YMR117C RPL28P02406 149 aaKnown RBP2.48□□□□□ -2.01
SPC24YMR117C APS1P35181 156 aa2.48□□□□□ -2.01
SPC24YMR117C TCD1P38756 429 aa2.48□□□□□ -2.01
SPC24YMR117C RTC3P38804 111 aaPredicted RBP2.48□□□□□ -2.01
SPC24YMR117C FAR7P43592 221 aa2.48□□□□□ -2.01
SPC24YMR117C BOL2P53082 120 aa2.48□□□□□ -2.01
SPC24YMR117C YLR156WP0CE96 114 aa2.47□□□□□ -2.01
SPC24YMR117C YLR159WP0CE97 114 aa2.47□□□□□ -2.01
SPC24YMR117C YLR161WP0CE98 114 aa2.47□□□□□ -2.01
SPC24YMR117C YKR045CP36138 183 aa2.47□□□□□ -2.01
SPC24YMR117C NUP57P48837 541 aa2.47□□□□□ -2.01
SPC24YMR117C RPL27BP0C2H7 136 aaKnown RBP2.46□□□□□ -2.02
SPC24YMR117C YBR121C-AP0C5L4 52 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms