RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C MTC1P47018 478 aaKnown RBP17.38■□□□□ 0.37
SPC24YMR117C DRS1P32892 752 aaKnown RBP17.34■□□□□ 0.37
SPC24YMR117C BFR2Q06631 534 aaKnown RBP14.95□□□□□ -0.02
SPC24YMR117C DIP2Q12220 943 aaPredicted RBP14.78□□□□□ -0.04
SPC24YMR117C AVT3P36062 692 aa14.54□□□□□ -0.08
SPC24YMR117C FAP1P53971 965 aa14.41□□□□□ -0.1
SPC24YMR117C ISW2Q08773 1120 aa14.2□□□□□ -0.14
SPC24YMR117C RSE1Q04693 1361 aaKnown RBP14.01□□□□□ -0.17
SPC24YMR117C PRI1P10363 409 aa14.01□□□□□ -0.17
SPC24YMR117C TFA1P36100 482 aa13.96□□□□□ -0.17
SPC24YMR117C RPG1P38249 964 aaKnown RBP13.96□□□□□ -0.17
SPC24YMR117C AAD16Q02895 342 aa13.8□□□□□ -0.2
SPC24YMR117C RPL17AP05740 184 aaKnown RBP13.48□□□□□ -0.25
SPC24YMR117C RPL17BP46990 184 aaKnown RBP13.48□□□□□ -0.25
SPC24YMR117C PRY3P47033 881 aa13.47□□□□□ -0.25
SPC24YMR117C REB1P21538 810 aa13.35□□□□□ -0.27
SPC24YMR117C TSR3Q12094 313 aaKnown RBP13.29□□□□□ -0.28
SPC24YMR117C SPT21P35209 758 aa12.96□□□□□ -0.33
SPC24YMR117C MRPL32P25348 183 aa12.81□□□□□ -0.36
SPC24YMR117C RIM101P33400 625 aa12.75□□□□□ -0.37
SPC24YMR117C HAA1Q12753 694 aaKnown RBP12.73□□□□□ -0.37
SPC24YMR117C YCK3P39962 524 aa12.66□□□□□ -0.38
SPC24YMR117C YKR023WP36119 530 aaKnown RBP12.54□□□□□ -0.4
SPC24YMR117C OXP1P28273 1286 aa12.33□□□□□ -0.44
SPC24YMR117C TFC8Q12308 588 aa12.32□□□□□ -0.44
SPC24YMR117C CDC27P38042 758 aa12.31□□□□□ -0.44
SPC24YMR117C HOP09932 586 aa12.29□□□□□ -0.44
SPC24YMR117C PTP3P40048 928 aa12.25□□□□□ -0.45
SPC24YMR117C YIL055CP40523 627 aaKnown RBP12.22□□□□□ -0.45
SPC24YMR117C DCD1P06773 312 aa12.19□□□□□ -0.46
SPC24YMR117C YAH1Q12184 172 aaKnown RBP12.16□□□□□ -0.46
SPC24YMR117C SSP1P38871 571 aa12.15□□□□□ -0.46
SPC24YMR117C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.02□□□□□ -0.49not detected
SPC24YMR117C RSM7P47150 247 aa12.01□□□□□ -0.49
SPC24YMR117C YLR271WQ06152 274 aa11.98□□□□□ -0.49
SPC24YMR117C YGL015CP33199 130 aa11.97□□□□□ -0.49
SPC24YMR117C BCH2P36122 765 aa11.94□□□□□ -0.5
SPC24YMR117C UBP10P53874 792 aaPredicted RBP11.9□□□□□ -0.5
SPC24YMR117C MAP2P38174 421 aaKnown RBP11.82□□□□□ -0.52
SPC24YMR117C AI2P03876 854 aa11.8□□□□□ -0.52
SPC24YMR117C RQC2Q12532 1038 aaKnown RBP11.8□□□□□ -0.52
SPC24YMR117C BBC1P47068 1157 aa11.79□□□□□ -0.52
SPC24YMR117C SCY1P53009 804 aa11.79□□□□□ -0.52
SPC24YMR117C EPS1P40557 701 aa11.75□□□□□ -0.53
SPC24YMR117C MGA2P40578 1113 aa11.75□□□□□ -0.53
SPC24YMR117C PSD2P53037 1138 aaKnown RBP11.7□□□□□ -0.54
SPC24YMR117C BDF1P35817 686 aa11.66□□□□□ -0.54
SPC24YMR117C SLX5P32828 619 aaKnown RBP11.61□□□□□ -0.55
SPC24YMR117C CST9Q06032 482 aa11.61□□□□□ -0.55
SPC24YMR117C MRM1P25270 412 aa11.44□□□□□ -0.58
SPC24YMR117C DMA1P38823 416 aa11.43□□□□□ -0.58
SPC24YMR117C TIF4632P39936 914 aaKnown RBP11.42□□□□□ -0.58
SPC24YMR117C TGL3P40308 642 aa11.3□□□□□ -0.6
SPC24YMR117C RTG3P38165 486 aa11.29□□□□□ -0.6
SPC24YMR117C RCR1P38212 213 aa11.22□□□□□ -0.61
SPC24YMR117C RAM2P29703 316 aa11.18□□□□□ -0.62
SPC24YMR117C NSR1P27476 414 aaKnown RBP RIP-Chip data11.17□□□□□ -0.62not detected
SPC24YMR117C VPS29P38759 282 aa11.13□□□□□ -0.63
SPC24YMR117C YMR1P47147 688 aaKnown RBP RIP-Chip data11.11□□□□□ -0.63not detected
SPC24YMR117C YAP5P40574 245 aa11.1□□□□□ -0.63
SPC24YMR117C MAK11P20484 414 aaKnown RBP11.07□□□□□ -0.64
SPC24YMR117C YOR238WQ08634 303 aa11.06□□□□□ -0.64
SPC24YMR117C DBP1P24784 617 aaKnown RBP11.01□□□□□ -0.65
SPC24YMR117C STS1P38637 319 aa11□□□□□ -0.65
SPC24YMR117C YFR006WP43590 535 aa10.97□□□□□ -0.65
SPC24YMR117C SET1P38827 1080 aaKnown RBP10.94□□□□□ -0.66
SPC24YMR117C MST1P07236 462 aa10.93□□□□□ -0.66
SPC24YMR117C PIB1Q06651 286 aa10.93□□□□□ -0.66
SPC24YMR117C COQ8P27697 501 aa10.89□□□□□ -0.67
SPC24YMR117C SAS10Q12136 610 aaPredicted RBP10.88□□□□□ -0.67
SPC24YMR117C MIF2P35201 549 aa10.87□□□□□ -0.67
SPC24YMR117C GTT3P39996 337 aa10.84□□□□□ -0.67
SPC24YMR117C IFH1P39520 1085 aa10.83□□□□□ -0.68
SPC24YMR117C VMA1P17255 1071 aaKnown RBP10.82□□□□□ -0.68
SPC24YMR117C NOP53Q12080 455 aaKnown RBP10.81□□□□□ -0.68
SPC24YMR117C EDS1P38073 919 aa10.79□□□□□ -0.68
SPC24YMR117C YPR148CQ06523 435 aa10.76□□□□□ -0.69
SPC24YMR117C PTC3P34221 468 aaKnown RBP10.73□□□□□ -0.69
SPC24YMR117C SAM3Q08986 587 aa10.72□□□□□ -0.69
SPC24YMR117C VPS70P47161 811 aa10.69□□□□□ -0.7
SPC24YMR117C UBP9P39967 754 aa10.66□□□□□ -0.7
SPC24YMR117C GRE2Q12068 342 aaKnown RBP10.66□□□□□ -0.7
SPC24YMR117C CKB1P43639 278 aa10.65□□□□□ -0.7
SPC24YMR117C YOL036WQ08206 761 aa10.64□□□□□ -0.71
SPC24YMR117C ATH1P48016 1211 aa10.63□□□□□ -0.71
SPC24YMR117C WSC3Q12215 556 aa10.63□□□□□ -0.71
SPC24YMR117C GYP5Q12344 894 aa10.63□□□□□ -0.71
SPC24YMR117C MSB4Q12317 492 aa10.62□□□□□ -0.71
SPC24YMR117C ABP1P15891 592 aaKnown RBP10.6□□□□□ -0.71
SPC24YMR117C GUT1P32190 709 aa10.6□□□□□ -0.71
SPC24YMR117C SET4P42948 560 aa10.59□□□□□ -0.71
SPC24YMR117C YBL029C-AQ3E756 94 aa10.59□□□□□ -0.71
SPC24YMR117C VNX1P42839 908 aa10.54□□□□□ -0.72
SPC24YMR117C EAP1P36041 632 aaKnown RBP10.51□□□□□ -0.73
SPC24YMR117C DCW1P36091 449 aa10.51□□□□□ -0.73
SPC24YMR117C HTA1P04911 132 aaKnown RBP10.5□□□□□ -0.73
SPC24YMR117C HTA2P04912 132 aa10.5□□□□□ -0.73
SPC24YMR117C SPB4P25808 606 aaPredicted RBP10.49□□□□□ -0.73
SPC24YMR117C REF2P42073 533 aaPredicted RBP10.49□□□□□ -0.73
SPC24YMR117C LEU3P08638 886 aa10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms