RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SSQ1Q05931 657 aaPredicted RBP1.56□□□□□ -2.16
LOC1YFR001W CUE1P38428 203 aa1.55□□□□□ -2.16
LOC1YFR001W VTC1P40046 129 aaRIP-Chip data1.55□□□□□ -2.16not detected
LOC1YFR001W PEX17P40155 199 aa1.55□□□□□ -2.16
LOC1YFR001W TRM9P49957 279 aa1.55□□□□□ -2.16
LOC1YFR001W NUP84P52891 726 aa1.55□□□□□ -2.16
LOC1YFR001W TOS8P53147 276 aa1.55□□□□□ -2.16
LOC1YFR001W ABF2Q02486 183 aa1.55□□□□□ -2.16
LOC1YFR001W CDC8P00572 216 aa1.54□□□□□ -2.16
LOC1YFR001W PET9P18239 318 aaKnown RBP1.54□□□□□ -2.16
LOC1YFR001W SRB4P32569 687 aa1.54□□□□□ -2.16
LOC1YFR001W NTF2P33331 125 aaKnown RBP1.54□□□□□ -2.16
LOC1YFR001W SVP26P38869 228 aa1.54□□□□□ -2.16
LOC1YFR001W AGE2P40529 298 aa1.54□□□□□ -2.16
LOC1YFR001W ERV29P53337 310 aa1.54□□□□□ -2.16
LOC1YFR001W PET117Q02771 107 aa1.54□□□□□ -2.16
LOC1YFR001W YLR283WQ05867 314 aa1.54□□□□□ -2.16
LOC1YFR001W BCY1P07278 416 aaKnown RBP1.53□□□□□ -2.16
LOC1YFR001W YOL162WP0CF19 215 aa1.53□□□□□ -2.16
LOC1YFR001W YCR016WP25617 290 aaKnown RBP1.53□□□□□ -2.16
LOC1YFR001W AVT2P39981 480 aa1.53□□□□□ -2.16
LOC1YFR001W YNL010WP53981 241 aaKnown RBP1.53□□□□□ -2.16
LOC1YFR001W BUD25P85052 153 aa1.53□□□□□ -2.16
LOC1YFR001W MATALPHA1P0CY06 175 aa1.52□□□□□ -2.17
LOC1YFR001W HMLALPHA1P0CY07 175 aa1.52□□□□□ -2.17
LOC1YFR001W CDC10P25342 322 aaKnown RBP1.52□□□□□ -2.17
LOC1YFR001W MEI4P29467 408 aa1.52□□□□□ -2.17
LOC1YFR001W YBR219CP38317 127 aa1.52□□□□□ -2.17
LOC1YFR001W RPL33BP41056 107 aaKnown RBP1.52□□□□□ -2.17
LOC1YFR001W RPC17P47076 161 aa1.52□□□□□ -2.17
LOC1YFR001W NSA1P53136 463 aaPredicted RBP1.52□□□□□ -2.17
LOC1YFR001W DID2P69771 204 aa1.52□□□□□ -2.17
LOC1YFR001W TRM12Q04235 462 aa1.52□□□□□ -2.17
LOC1YFR001W PSF1Q12488 208 aa1.52□□□□□ -2.17
LOC1YFR001W CFT1Q06632 1357 aaKnown RBP1.51□□□□□ -2.17
LOC1YFR001W SPT3P06844 337 aa1.51□□□□□ -2.17
LOC1YFR001W VPS21P36017 210 aaKnown RBP1.51□□□□□ -2.17
LOC1YFR001W YKR045CP36138 183 aa1.51□□□□□ -2.17
LOC1YFR001W IRC22P40006 225 aa1.51□□□□□ -2.17
LOC1YFR001W ICE2P40499 491 aa1.51□□□□□ -2.17
LOC1YFR001W YMD8Q03697 442 aa1.51□□□□□ -2.17
LOC1YFR001W YML108WQ03759 105 aa1.51□□□□□ -2.17
LOC1YFR001W SML1Q04964 104 aa1.51□□□□□ -2.17
LOC1YFR001W UBR2Q07963 1872 aa1.51□□□□□ -2.17
LOC1YFR001W CYR1P08678 2026 aaKnown RBP1.5□□□□□ -2.17
LOC1YFR001W YPR170W-BP0C5R9 85 aa1.5□□□□□ -2.17
LOC1YFR001W PGD1P40356 397 aa1.5□□□□□ -2.17
LOC1YFR001W TIR3P40552 269 aa1.5□□□□□ -2.17
LOC1YFR001W SPG3Q04398 127 aaPredicted RBP1.5□□□□□ -2.17
LOC1YFR001W YGL010WP25338 174 aa1.49□□□□□ -2.17
LOC1YFR001W MSN4P33749 630 aa1.49□□□□□ -2.17
LOC1YFR001W SRY1P36007 326 aa1.49□□□□□ -2.17
LOC1YFR001W URA8P38627 578 aaPredicted RBP1.49□□□□□ -2.17
LOC1YFR001W DOG2P38773 246 aa1.49□□□□□ -2.17
LOC1YFR001W GLE2P40066 365 aa1.49□□□□□ -2.17
LOC1YFR001W NOP13P53883 403 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
LOC1YFR001W CSI2Q08054 341 aa1.49□□□□□ -2.17
LOC1YFR001W LSO2Q3E772 92 aaKnown RBP1.49□□□□□ -2.17
LOC1YFR001W REP2P03872 296 aa1.48□□□□□ -2.17
LOC1YFR001W URA6P15700 204 aa1.48□□□□□ -2.17
LOC1YFR001W PRE6P40303 254 aaKnown RBP1.48□□□□□ -2.17
LOC1YFR001W LIA1P47120 325 aaKnown RBP1.48□□□□□ -2.17
LOC1YFR001W BOL2P53082 120 aa1.48□□□□□ -2.17
LOC1YFR001W LPP1Q04396 274 aa1.48□□□□□ -2.17
LOC1YFR001W YLR162WQ06235 118 aa1.48□□□□□ -2.17
LOC1YFR001W FLO9P39712 1322 aa1.47□□□□□ -2.17
LOC1YFR001W RPL27BP0C2H7 136 aaKnown RBP1.47□□□□□ -2.17
LOC1YFR001W YBR220CP38318 560 aa1.47□□□□□ -2.17
LOC1YFR001W YER085CP40058 173 aa1.47□□□□□ -2.17
LOC1YFR001W YRB2P40517 327 aa1.47□□□□□ -2.17
LOC1YFR001W MIC26P50087 233 aa1.47□□□□□ -2.17
LOC1YFR001W AIF1P52923 378 aa1.47□□□□□ -2.17
LOC1YFR001W FYV6P53913 173 aa1.47□□□□□ -2.17
LOC1YFR001W YLR156WP0CE96 114 aa1.46□□□□□ -2.18
LOC1YFR001W YLR159WP0CE97 114 aa1.46□□□□□ -2.18
LOC1YFR001W YLR161WP0CE98 114 aa1.46□□□□□ -2.18
LOC1YFR001W ATG22P25568 528 aa1.46□□□□□ -2.18
LOC1YFR001W POP4P38336 279 aa1.46□□□□□ -2.18
LOC1YFR001W YNL217WP40152 326 aa1.46□□□□□ -2.18
LOC1YFR001W NUP49Q02199 472 aa1.46□□□□□ -2.18
LOC1YFR001W CDC123Q05791 360 aa1.46□□□□□ -2.18
LOC1YFR001W CDC28P00546 298 aaKnown RBP1.45□□□□□ -2.18
LOC1YFR001W RHO1P06780 209 aaKnown RBP1.45□□□□□ -2.18
LOC1YFR001W RPL2AP0CX45 254 aaKnown RBP1.45□□□□□ -2.18
LOC1YFR001W RPL2BP0CX46 254 aaKnown RBP1.45□□□□□ -2.18
LOC1YFR001W MRPS28P21771 286 aa1.45□□□□□ -2.18
LOC1YFR001W FZF1P32805 299 aa1.45□□□□□ -2.18
LOC1YFR001W SSO1P32867 290 aa1.45□□□□□ -2.18
LOC1YFR001W COX15P40086 486 aa1.45□□□□□ -2.18
LOC1YFR001W DOC1P53068 250 aa1.45□□□□□ -2.18
LOC1YFR001W SNZ1Q03148 297 aa1.45□□□□□ -2.18
LOC1YFR001W MZM1Q03429 123 aaPredicted RBP1.45□□□□□ -2.18
LOC1YFR001W DRS2P39524 1355 aa1.45□□□□□ -2.18
LOC1YFR001W FPR1P20081 114 aaKnown RBP1.44□□□□□ -2.18
LOC1YFR001W UPS2P35200 230 aa1.44□□□□□ -2.18
LOC1YFR001W RPL13BP40212 199 aaKnown RBP1.44□□□□□ -2.18
LOC1YFR001W BRR6P53062 197 aa1.44□□□□□ -2.18
LOC1YFR001W ALG13P53178 202 aa1.44□□□□□ -2.18
LOC1YFR001W RPL13AQ12690 199 aaPredicted RBP1.44□□□□□ -2.18
LOC1YFR001W TDA8Q6B2U8 126 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 95 ms