Protein–RNA interactions for Protein: Q6B2U8

TDA8, Topoisomerase I damage affected protein 8, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA8Q6B2U8 NSR1YGR159C 1245 nt12.8□□□□□ -0.36
TDA8Q6B2U8 YML009W-BYML009W-B 477 nt12.52□□□□□ -0.41
TDA8Q6B2U8 NOP1YDL014W 984 nt12.03□□□□□ -0.48
TDA8Q6B2U8 MDJ1YFL016C 1536 nt11.72□□□□□ -0.53
TDA8Q6B2U8 SSA3YBL075C 1950 nt10.96□□□□□ -0.66
TDA8Q6B2U8 YJL027CYJL027C 417 nt10.83□□□□□ -0.68
TDA8Q6B2U8 YKL036CYKL036C 393 nt10.68□□□□□ -0.7
TDA8Q6B2U8 SRX1YKL086W 384 nt10.47□□□□□ -0.73
TDA8Q6B2U8 Q0297Q0297 156 nt10.34□□□□□ -0.75
TDA8Q6B2U8 DBP2YNL112W 1641 nt10.17□□□□□ -0.78
TDA8Q6B2U8 YBR190WYBR190W 312 nt10.14□□□□□ -0.79
TDA8Q6B2U8 YCR051WYCR051W 669 nt9.93□□□□□ -0.82
TDA8Q6B2U8 RTC3YHR087W 336 nt9.92□□□□□ -0.82
TDA8Q6B2U8 TRN1tP(UGG)A 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 SUF9tP(UGG)F 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 SUF8tP(UGG)H 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 tP(UGG)LtP(UGG)L 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 SUF7tP(UGG)M 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 tP(UGG)N1tP(UGG)N1 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 tP(UGG)N2tP(UGG)N2 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 tP(UGG)O1tP(UGG)O1 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 SUF11tP(UGG)O2 72 nt9.7□□□□□ -0.86
TDA8Q6B2U8 CCC1YLR220W 969 nt9.62□□□□□ -0.87
TDA8Q6B2U8 RVS167YDR388W 1449 nt9.58□□□□□ -0.88
TDA8Q6B2U8 PUT4YOR348C 1884 nt9.49□□□□□ -0.89
TDA8Q6B2U8 SCS3YGL126W 1143 nt9.47□□□□□ -0.89
TDA8Q6B2U8 Q0182Q0182 405 nt9.46□□□□□ -0.9
TDA8Q6B2U8 SCJ1YMR214W 1134 nt9.34□□□□□ -0.91
TDA8Q6B2U8 PAC11YDR488C 1602 nt9.33□□□□□ -0.92
TDA8Q6B2U8 RPP1BYDL130W 321 nt9.29□□□□□ -0.92
TDA8Q6B2U8 NVJ2YPR091C 2313 nt9.25□□□□□ -0.93
TDA8Q6B2U8 SSA4YER103W 1929 nt9.25□□□□□ -0.93
TDA8Q6B2U8 YOL085CYOL085C 342 nt9.23□□□□□ -0.93
TDA8Q6B2U8 ARE1YCR048W 1833 nt9.19□□□□□ -0.94
TDA8Q6B2U8 POA1YBR022W 534 nt9.17□□□□□ -0.94
TDA8Q6B2U8 SSA1YAL005C 1929 nt9.14□□□□□ -0.95
TDA8Q6B2U8 PKP1YIL042C 1185 nt9.14□□□□□ -0.95
TDA8Q6B2U8 URN1YPR152C 1398 nt9.11□□□□□ -0.95
TDA8Q6B2U8 FPS1YLL043W 2010 nt9.1□□□□□ -0.95
TDA8Q6B2U8 YHR049C-AYHR049C-A 297 nt9.1□□□□□ -0.95
TDA8Q6B2U8 SHR5YOL110W 714 nt9.1□□□□□ -0.95
TDA8Q6B2U8 SPT5YML010W 3192 nt9.09□□□□□ -0.95
TDA8Q6B2U8 SAH1YER043C 1350 nt9.08□□□□□ -0.96
TDA8Q6B2U8 BSC6YOL137W 1494 nt9.05□□□□□ -0.96
TDA8Q6B2U8 tP(UGG)O3tP(UGG)O3 72 nt9.05□□□□□ -0.96
TDA8Q6B2U8 OPI9YLR338W 858 nt9.04□□□□□ -0.96
TDA8Q6B2U8 BDF1YLR399C 2061 nt9.03□□□□□ -0.96
TDA8Q6B2U8 DEP1YAL013W 1218 nt8.97□□□□□ -0.97
TDA8Q6B2U8 RPN10YHR200W 807 nt8.93□□□□□ -0.98
TDA8Q6B2U8 PET122YER153C 765 nt8.91□□□□□ -0.98
TDA8Q6B2U8 BUD23YCR047C 828 nt8.88□□□□□ -0.99
TDA8Q6B2U8 TAT1YBR069C 1860 nt8.87□□□□□ -0.99
TDA8Q6B2U8 PUN1YLR414C 792 nt8.81□□□□□ -1
TDA8Q6B2U8 YNL208WYNL208W 600 nt8.81□□□□□ -1
TDA8Q6B2U8 SCR1SCR1 522 nt8.77□□□□□ -1.01
TDA8Q6B2U8 PTC2YER089C 1395 nt8.75□□□□□ -1.01
TDA8Q6B2U8 YDJ1YNL064C 1230 nt8.75□□□□□ -1.01
TDA8Q6B2U8 MOT3YMR070W 1473 nt8.73□□□□□ -1.01
TDA8Q6B2U8 NAB2YGL122C 1578 nt8.72□□□□□ -1.01
TDA8Q6B2U8 YJR018WYJR018W 363 nt8.66□□□□□ -1.02
TDA8Q6B2U8 GAR1YHR089C 618 nt8.63□□□□□ -1.03
TDA8Q6B2U8 RRN5YLR141W 1092 nt8.61□□□□□ -1.03
TDA8Q6B2U8 UME6YDR207C 2511 nt8.55□□□□□ -1.04
TDA8Q6B2U8 MEP2YNL142W 1500 nt8.54□□□□□ -1.04
TDA8Q6B2U8 DAL1YIR027C 1383 nt8.51□□□□□ -1.05
TDA8Q6B2U8 FPR4YLR449W 1179 nt8.51□□□□□ -1.05
TDA8Q6B2U8 FIS1YIL065C 468 nt8.49□□□□□ -1.05
TDA8Q6B2U8 RPP2BYDR382W 333 nt8.43□□□□□ -1.06
TDA8Q6B2U8 INM2YDR287W 879 nt8.42□□□□□ -1.06
TDA8Q6B2U8 YER088W-BYER088W-B 147 nt8.42□□□□□ -1.06
TDA8Q6B2U8 PHO4YFR034C 939 nt8.42□□□□□ -1.06
TDA8Q6B2U8 YPS1YLR120C 1710 nt8.4□□□□□ -1.07
TDA8Q6B2U8 TIR1YER011W 765 nt8.37□□□□□ -1.07
TDA8Q6B2U8 YHR165W-AYHR165W-A 312 nt8.37□□□□□ -1.07
TDA8Q6B2U8 DCW1YKL046C 1350 nt8.36□□□□□ -1.07
TDA8Q6B2U8 ATS1YAL020C 1002 nt8.35□□□□□ -1.07
TDA8Q6B2U8 YJR120WYJR120W 351 nt8.34□□□□□ -1.07
TDA8Q6B2U8 RSB1YOR049C 1065 nt8.34□□□□□ -1.07
TDA8Q6B2U8 YMR090WYMR090W 684 nt8.33□□□□□ -1.08
TDA8Q6B2U8 EMI2YDR516C 1503 nt8.28□□□□□ -1.08
TDA8Q6B2U8 YDR095CYDR095C 411 nt8.27□□□□□ -1.09
TDA8Q6B2U8 YBL100CYBL100C 315 nt8.27□□□□□ -1.09
TDA8Q6B2U8 YBR220CYBR220C 1683 nt8.24□□□□□ -1.09
TDA8Q6B2U8 RPM1RPM1 483 nt8.23□□□□□ -1.09
TDA8Q6B2U8 GUT2YIL155C 1950 nt8.22□□□□□ -1.09
TDA8Q6B2U8 YDL221WYDL221W 552 nt8.18□□□□□ -1.1
TDA8Q6B2U8 SDH1YKL148C 1923 nt8.16□□□□□ -1.1
TDA8Q6B2U8 ALF1YNL148C 765 nt8.16□□□□□ -1.1
TDA8Q6B2U8 PCH2YBR186W 1695 nt8.16□□□□□ -1.1
TDA8Q6B2U8 FUN26YAL022C 1554 nt8.14□□□□□ -1.11
TDA8Q6B2U8 BDH2YAL061W 1254 nt8.14□□□□□ -1.11
TDA8Q6B2U8 RPP2AYOL039W 321 nt8.14□□□□□ -1.11
TDA8Q6B2U8 MCH5YOR306C 1566 nt8.13□□□□□ -1.11
TDA8Q6B2U8 BOR1YNL275W 1731 nt8.12□□□□□ -1.11
TDA8Q6B2U8 CAC2YML102W 1407 nt8.11□□□□□ -1.11
TDA8Q6B2U8 PTP1YDL230W 1008 nt8.08□□□□□ -1.12
TDA8Q6B2U8 TRM9YML014W 840 nt8.08□□□□□ -1.12
TDA8Q6B2U8 SEC11YIR022W 504 nt8.06□□□□□ -1.12
TDA8Q6B2U8 SCC4YER147C 1875 nt8.06□□□□□ -1.12
TDA8Q6B2U8 PIB2YGL023C 1908 nt8.03□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms