RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeastyeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI6YLR182W YJR149WP47177 404 aa0.9□□□□□ -2.26
SWI6YLR182W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.9□□□□□ -2.26not detected
SWI6YLR182W YPR147CQ06522 304 aaKnown RBP0.9□□□□□ -2.26
SWI6YLR182W YPR172WQ06608 200 aa0.9□□□□□ -2.26
SWI6YLR182W YCT1Q12235 531 aa0.9□□□□□ -2.26
SWI6YLR182W SIR4P11978 1358 aa0.9□□□□□ -2.27
SWI6YLR182W RPO31P04051 1460 aa0.9□□□□□ -2.27
SWI6YLR182W SEI1Q06058 285 aa0.9□□□□□ -2.27
SWI6YLR182W CSM4Q08955 156 aa0.9□□□□□ -2.27
SWI6YLR182W TY3A-GQ12173 290 aa0.9□□□□□ -2.27
SWI6YLR182W TY3A-IQ99219 290 aa0.9□□□□□ -2.27
SWI6YLR182W SSK2P53599 1579 aa0.9□□□□□ -2.27
SWI6YLR182W CYR1P08678 2026 aaKnown RBP0.9□□□□□ -2.27
SWI6YLR182W POL1P13382 1468 aa0.9□□□□□ -2.27
SWI6YLR182W CHD1P32657 1468 aa0.9□□□□□ -2.27
SWI6YLR182W GRX2P17695 143 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W RPO26P20435 155 aa0.89□□□□□ -2.27
SWI6YLR182W ERG24P32462 438 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W DNF1P32660 1571 aa0.89□□□□□ -2.27
SWI6YLR182W DOG1P38774 246 aa0.89□□□□□ -2.27
SWI6YLR182W USE1P53146 245 aa0.89□□□□□ -2.27
SWI6YLR182W YDR124WQ04608 324 aa0.89□□□□□ -2.27
SWI6YLR182W YPK9Q12697 1472 aa0.89□□□□□ -2.27
SWI6YLR182W TOP2P06786 1428 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W TRM732Q03496 1420 aa0.89□□□□□ -2.27
SWI6YLR182W MRP1P10662 321 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W YHB1P39676 399 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W LSM4P40070 187 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W ARC15P40518 154 aaRIP-Chip data0.89□□□□□ -2.27not detected
SWI6YLR182W NIP7Q08962 181 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W BTS1Q12051 335 aa0.89□□□□□ -2.27
SWI6YLR182W YCF1P39109 1515 aaKnown RBP0.89□□□□□ -2.27
SWI6YLR182W ESP1Q03018 1630 aa0.89□□□□□ -2.27
SWI6YLR182W MMS22Q06164 1454 aa0.89□□□□□ -2.27
SWI6YLR182W SIN3P22579 1536 aa0.88□□□□□ -2.27
SWI6YLR182W DSF1P0CX08 502 aa0.88□□□□□ -2.27
SWI6YLR182W YNR073CP0CX09 502 aa0.88□□□□□ -2.27
SWI6YLR182W SCL1P21243 252 aaKnown RBP0.88□□□□□ -2.27
SWI6YLR182W COS8P38723 381 aa0.88□□□□□ -2.27
SWI6YLR182W BFR1P38934 470 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
SWI6YLR182W BNA6P43619 295 aa0.88□□□□□ -2.27
SWI6YLR182W MRPS8Q03799 155 aa0.88□□□□□ -2.27
SWI6YLR182W FAR8Q05040 523 aa0.88□□□□□ -2.27
SWI6YLR182W ATG17Q06410 417 aa0.88□□□□□ -2.27
SWI6YLR182W ARR2Q06597 130 aa0.88□□□□□ -2.27
SWI6YLR182W RRP40Q08285 240 aaKnown RBP0.88□□□□□ -2.27
SWI6YLR182W AKR2Q12013 749 aa0.88□□□□□ -2.27
SWI6YLR182W SNT2P53127 1403 aa0.88□□□□□ -2.27
SWI6YLR182W GDB1Q06625 1536 aa0.88□□□□□ -2.27
SWI6YLR182W VPS21P36017 210 aaKnown RBP0.88□□□□□ -2.27
SWI6YLR182W GTR2P53290 341 aa0.88□□□□□ -2.27
SWI6YLR182W SRL4Q03085 281 aa0.88□□□□□ -2.27
SWI6YLR182W YDR209CQ03480 137 aa0.88□□□□□ -2.27
SWI6YLR182W YLR173WQ06247 608 aa0.88□□□□□ -2.27
SWI6YLR182W RRS1Q08746 203 aaKnown RBP0.88□□□□□ -2.27
SWI6YLR182W YOR1P53049 1477 aa0.88□□□□□ -2.27
SWI6YLR182W IKI3Q06706 1349 aaKnown RBP0.88□□□□□ -2.27
SWI6YLR182W SPP41P38904 1435 aa0.87□□□□□ -2.27
SWI6YLR182W TY3B-GQ99315 1547 aa0.87□□□□□ -2.27
SWI6YLR182W CDC7P06243 507 aa0.87□□□□□ -2.27
SWI6YLR182W RNA15P25299 296 aaPredicted RBP0.87□□□□□ -2.27
SWI6YLR182W NTF2P33331 125 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W SRY1P36007 326 aa0.87□□□□□ -2.27
SWI6YLR182W YPT52P36018 234 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W GOT1Q03554 138 aa0.87□□□□□ -2.27
SWI6YLR182W INM2Q05533 292 aa0.87□□□□□ -2.27
SWI6YLR182W PAM18Q07914 168 aa0.87□□□□□ -2.27
SWI6YLR182W YLR126CQ12288 251 aa0.87□□□□□ -2.27
SWI6YLR182W THO2P53552 1597 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W RKR1Q04781 1562 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-LR1P0C2J3 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-FP0CX63 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-GR2P0CX64 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-CP25384 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-DR2Q03494 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY1B-DR1Q03855 1755 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-DR3Q07791 1770 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W TY2B-OR1Q12113 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-DR1Q12472 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY2B-OR2Q12501 1770 aa0.87□□□□□ -2.27
SWI6YLR182W TY1B-DR3Q99231 1755 aa0.87□□□□□ -2.27
SWI6YLR182W SNQ2P32568 1501 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W TSC11P40061 1430 aa0.87□□□□□ -2.27
SWI6YLR182W PDR11P40550 1411 aa0.87□□□□□ -2.27
SWI6YLR182W TOM1Q03280 3268 aa0.87□□□□□ -2.27
SWI6YLR182W VPS15P22219 1454 aa0.87□□□□□ -2.27
SWI6YLR182W MATALPHA1P0CY06 175 aa0.87□□□□□ -2.27
SWI6YLR182W HMLALPHA1P0CY07 175 aa0.87□□□□□ -2.27
SWI6YLR182W SNA3P14359 133 aa0.87□□□□□ -2.27
SWI6YLR182W SSH1P38353 490 aaKnown RBP0.87□□□□□ -2.27
SWI6YLR182W YHR180WP38868 163 aa0.87□□□□□ -2.27
SWI6YLR182W AYR1P40471 297 aa0.87□□□□□ -2.27
SWI6YLR182W PRM10P42946 383 aa0.87□□□□□ -2.27
SWI6YLR182W SPG3Q04398 127 aaPredicted RBP0.87□□□□□ -2.27
SWI6YLR182W MHT1Q12525 324 aa0.87□□□□□ -2.27
SWI6YLR182W BUD3P25558 1636 aa0.87□□□□□ -2.27
SWI6YLR182W GEA1P47102 1408 aaPredicted RBP0.87□□□□□ -2.27
SWI6YLR182W SMC4Q12267 1418 aa0.87□□□□□ -2.27
SWI6YLR182W TY1B-BRQ12193 1756 aa0.86□□□□□ -2.27
SWI6YLR182W TY1B-GR3Q12316 1755 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms