RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C YBR096WP38256 230 aa8.7□□□□□ -1.02
ARP6YLR085C GEP4P38812 185 aa8.7□□□□□ -1.02
ARP6YLR085C AIM46P38885 310 aa8.7□□□□□ -1.02
ARP6YLR085C BFR1P38934 470 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
ARP6YLR085C PTI1P39927 425 aaPredicted RBP8.7□□□□□ -1.02
ARP6YLR085C YND1P40009 630 aa8.7□□□□□ -1.02
ARP6YLR085C PHB1P40961 287 aa8.7□□□□□ -1.02
ARP6YLR085C GNA1P43577 159 aaPredicted RBP8.7□□□□□ -1.02
ARP6YLR085C YNR040WP53736 256 aa8.7□□□□□ -1.02
ARP6YLR085C ALG9P53868 555 aaKnown RBP8.7□□□□□ -1.02
ARP6YLR085C YAP6Q03935 383 aa8.7□□□□□ -1.02
ARP6YLR085C CAB5Q03941 241 aa8.7□□□□□ -1.02
ARP6YLR085C CPR4P25334 318 aa8.69□□□□□ -1.02
ARP6YLR085C MRP20P32387 263 aa8.69□□□□□ -1.02
ARP6YLR085C FIG1P38224 298 aa8.69□□□□□ -1.02
ARP6YLR085C SEC24P40482 926 aaKnown RBP8.69□□□□□ -1.02
ARP6YLR085C UBP8P50102 471 aa8.69□□□□□ -1.02
ARP6YLR085C UFD1P53044 361 aa8.69□□□□□ -1.02
ARP6YLR085C TNA1P53322 534 aa8.69□□□□□ -1.02
ARP6YLR085C MRX9Q07349 420 aaKnown RBP8.69□□□□□ -1.02
ARP6YLR085C YJR112W-AQ3E743 109 aa8.69□□□□□ -1.02
ARP6YLR085C SEC16P48415 2195 aaKnown RBP8.68□□□□□ -1.02
ARP6YLR085C REP2P03872 296 aa8.68□□□□□ -1.02
ARP6YLR085C PUT1P09368 476 aa8.68□□□□□ -1.02
ARP6YLR085C RPL40AP0CH08 128 aaKnown RBP8.68□□□□□ -1.02
ARP6YLR085C RPL40BP0CH09 128 aaKnown RBP8.68□□□□□ -1.02
ARP6YLR085C MGE1P38523 228 aa8.68□□□□□ -1.02
ARP6YLR085C MOB2P43563 287 aa8.68□□□□□ -1.02
ARP6YLR085C YJR011CP47086 261 aaPredicted RBP8.68□□□□□ -1.02
ARP6YLR085C SKP1P52286 194 aa8.68□□□□□ -1.02
ARP6YLR085C DLT1Q04216 342 aa8.68□□□□□ -1.02
ARP6YLR085C HRI1Q05905 244 aaKnown RBP8.68□□□□□ -1.02
ARP6YLR085C SYM1Q06563 197 aa8.68□□□□□ -1.02
ARP6YLR085C USB1Q12208 290 aaKnown RBP8.68□□□□□ -1.02
ARP6YLR085C IZH2Q12442 317 aa8.68□□□□□ -1.02
ARP6YLR085C YLL053CP0CD98 152 aa8.67□□□□□ -1.02
ARP6YLR085C ARO3P14843 370 aaKnown RBP8.67□□□□□ -1.02
ARP6YLR085C TIP1P27654 210 aaPredicted RBP8.67□□□□□ -1.02
ARP6YLR085C MRPL39P36533 70 aa8.67□□□□□ -1.02
ARP6YLR085C YMR144WP40214 342 aaKnown RBP8.67□□□□□ -1.02
ARP6YLR085C NSA1P53136 463 aaPredicted RBP8.67□□□□□ -1.02
ARP6YLR085C MRPL19P53875 158 aa8.67□□□□□ -1.02
ARP6YLR085C SCP1Q08873 200 aa8.67□□□□□ -1.02
ARP6YLR085C UBA3Q99344 299 aa8.67□□□□□ -1.02
ARP6YLR085C AGA2P32781 87 aa8.66□□□□□ -1.02
ARP6YLR085C MOH1P38191 138 aa8.66□□□□□ -1.02
ARP6YLR085C YEL057CP39983 233 aa8.66□□□□□ -1.02
ARP6YLR085C BMT5P40493 336 aa8.66□□□□□ -1.02
ARP6YLR085C YIR035CP40579 254 aa8.66□□□□□ -1.02
ARP6YLR085C TAD2P47058 250 aa8.66□□□□□ -1.02
ARP6YLR085C YJR111CP47148 283 aaKnown RBP8.66□□□□□ -1.02
ARP6YLR085C HHT1P61830 136 aa8.66□□□□□ -1.02
ARP6YLR085C HUT1Q12520 339 aa8.66□□□□□ -1.02
ARP6YLR085C YPR053CQ6Q5F3 151 aa8.66□□□□□ -1.02
ARP6YLR085C SEN1Q00416 2231 aaKnown RBP8.65□□□□□ -1.02
ARP6YLR085C YBR085C-AO43137 85 aa8.65□□□□□ -1.02
ARP6YLR085C TPI1P00942 248 aaKnown RBP8.65□□□□□ -1.02
ARP6YLR085C OLE1P21147 510 aaKnown RBP8.65□□□□□ -1.02
ARP6YLR085C DBP2P24783 546 aaKnown RBP8.65□□□□□ -1.02
ARP6YLR085C IFM1P25038 676 aa8.65□□□□□ -1.02
ARP6YLR085C FLO10P36170 1169 aa8.65□□□□□ -1.02
ARP6YLR085C MTC6P38849 526 aa8.65□□□□□ -1.02
ARP6YLR085C NIF3P53081 288 aa8.65□□□□□ -1.02
ARP6YLR085C SOK2P53438 785 aaPredicted RBP8.65□□□□□ -1.02
ARP6YLR085C SMX3P54999 86 aaPredicted RBP8.65□□□□□ -1.02
ARP6YLR085C RCE1Q03530 315 aa8.65□□□□□ -1.02
ARP6YLR085C RTT103Q05543 409 aa8.65□□□□□ -1.02
ARP6YLR085C VAM3Q12241 283 aa8.65□□□□□ -1.02
ARP6YLR085C MED4Q12343 284 aa8.65□□□□□ -1.02
ARP6YLR085C CDC28P00546 298 aaKnown RBP8.64□□□□□ -1.03
ARP6YLR085C RPL25P04456 142 aaKnown RBP8.64□□□□□ -1.03
ARP6YLR085C DEG1P31115 442 aaKnown RBP8.64□□□□□ -1.03
ARP6YLR085C MRPS5P33759 307 aa8.64□□□□□ -1.03
ARP6YLR085C SRY1P36007 326 aa8.64□□□□□ -1.03
ARP6YLR085C MCH2P36032 473 aa8.64□□□□□ -1.03
ARP6YLR085C SRP1Q02821 542 aaKnown RBP8.64□□□□□ -1.03
ARP6YLR085C NRG1Q03125 231 aa8.64□□□□□ -1.03
ARP6YLR085C SPR28Q04921 423 aa8.64□□□□□ -1.03
ARP6YLR085C ANT1Q06497 328 aa8.64□□□□□ -1.03
ARP6YLR085C RFU1Q08003 200 aa8.64□□□□□ -1.03
ARP6YLR085C YOL024WQ08172 172 aa8.64□□□□□ -1.03
ARP6YLR085C MSL5Q12186 476 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
ARP6YLR085C TFC7Q12415 435 aa8.64□□□□□ -1.03
ARP6YLR085C CDC39P25655 2108 aaKnown RBP8.64□□□□□ -1.03
ARP6YLR085C RPL7AP05737 244 aaKnown RBP8.63□□□□□ -1.03
ARP6YLR085C RPL35AP0CX84 120 aaKnown RBP8.63□□□□□ -1.03
ARP6YLR085C RPL35BP0CX85 120 aaKnown RBP8.63□□□□□ -1.03
ARP6YLR085C SEC22P22214 214 aa8.63□□□□□ -1.03
ARP6YLR085C NAT2P37293 288 aa8.63□□□□□ -1.03
ARP6YLR085C SSO2P39926 295 aa8.63□□□□□ -1.03
ARP6YLR085C YER158CP40095 573 aa8.63□□□□□ -1.03
ARP6YLR085C YHC3P47040 408 aa8.63□□□□□ -1.03
ARP6YLR085C SSN8P47821 323 aa8.63□□□□□ -1.03
ARP6YLR085C NOC4Q06512 552 aaPredicted RBP8.63□□□□□ -1.03
ARP6YLR085C RAF1Q06891 181 aa8.63□□□□□ -1.03
ARP6YLR085C YOR186WQ08560 144 aa8.63□□□□□ -1.03
ARP6YLR085C AEP3Q12089 606 aa8.63□□□□□ -1.03
ARP6YLR085C NCE102Q12207 173 aaRIP-Chip data8.63□□□□□ -1.03not detected
ARP6YLR085C RPL7BQ12213 244 aaKnown RBP8.63□□□□□ -1.03
ARP6YLR085C EAF3Q12432 401 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms