RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J YKR005CQ02203 525 aa4.68□□□□□ -1.66
HSX1tR(CCU)J ASR1Q06834 288 aa4.68□□□□□ -1.66
HSX1tR(CCU)J MRX9Q07349 420 aaKnown RBP4.68□□□□□ -1.66
HSX1tR(CCU)J ATG41Q12048 136 aa4.68□□□□□ -1.66
HSX1tR(CCU)J TIR4Q12218 487 aaPredicted RBP4.68□□□□□ -1.66
HSX1tR(CCU)J SUS1Q6WNK7 96 aa4.68□□□□□ -1.66
HSX1tR(CCU)J FSH3Q99369 266 aa4.68□□□□□ -1.66
HSX1tR(CCU)J Q0297Q9ZZV8 51 aa4.68□□□□□ -1.66
HSX1tR(CCU)J BPH1P25356 2167 aa4.67□□□□□ -1.66
HSX1tR(CCU)J CDC28P00546 298 aaKnown RBP4.67□□□□□ -1.66
HSX1tR(CCU)J YML003WP0CF16 290 aa4.67□□□□□ -1.66
HSX1tR(CCU)J RPS18AP0CX55 146 aaKnown RBP4.67□□□□□ -1.66
HSX1tR(CCU)J RPS18BP0CX56 146 aaPredicted RBP4.67□□□□□ -1.66
HSX1tR(CCU)J PET18P25362 215 aa4.67□□□□□ -1.66
HSX1tR(CCU)J CNE1P27825 502 aa4.67□□□□□ -1.66
HSX1tR(CCU)J NAB2P32505 525 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
HSX1tR(CCU)J SPC29P33419 253 aa4.67□□□□□ -1.66
HSX1tR(CCU)J MIA40P36046 403 aa4.67□□□□□ -1.66
HSX1tR(CCU)J MBA1P38300 278 aa4.67□□□□□ -1.66
HSX1tR(CCU)J YND1P40009 630 aa4.67□□□□□ -1.66
HSX1tR(CCU)J YIL012WP40551 113 aa4.67□□□□□ -1.66
HSX1tR(CCU)J SYS1P41544 203 aa4.67□□□□□ -1.66
HSX1tR(CCU)J ATG18P43601 500 aa4.67□□□□□ -1.66
HSX1tR(CCU)J SBH2P52871 88 aa4.67□□□□□ -1.66
HSX1tR(CCU)J DMA2P53924 522 aa4.67□□□□□ -1.66
HSX1tR(CCU)J YMR130WQ04223 302 aa4.67□□□□□ -1.66
HSX1tR(CCU)J SSK1Q07084 712 aa4.67□□□□□ -1.66
HSX1tR(CCU)J TMC1Q08422 150 aaPredicted RBP4.67□□□□□ -1.66
HSX1tR(CCU)J DCP1Q12517 231 aaPredicted RBP4.67□□□□□ -1.66
HSX1tR(CCU)J SPO24Q3E752 67 aa4.67□□□□□ -1.66
HSX1tR(CCU)J FUR4P05316 633 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J SPS4P09937 338 aa4.66□□□□□ -1.66
HSX1tR(CCU)J HOM6P31116 359 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J MRPL36P36531 177 aa4.66□□□□□ -1.66
HSX1tR(CCU)J MSS4P38994 779 aa4.66□□□□□ -1.66
HSX1tR(CCU)J YCK3P39962 524 aa4.66□□□□□ -1.66
HSX1tR(CCU)J GLR1P41921 483 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J RPS0BP46654 252 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J YGR054WP53235 642 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J TEX1P53851 422 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J INN1P53901 409 aa4.66□□□□□ -1.66
HSX1tR(CCU)J GMC1Q04399 608 aa4.66□□□□□ -1.66
HSX1tR(CCU)J PIN3Q06449 215 aa4.66□□□□□ -1.66
HSX1tR(CCU)J SNA4Q07549 140 aa4.66□□□□□ -1.66
HSX1tR(CCU)J NGL1Q08213 363 aaKnown RBP4.66□□□□□ -1.66
HSX1tR(CCU)J IES3Q12345 250 aa4.66□□□□□ -1.66
HSX1tR(CCU)J CHO1P08456 276 aa4.65□□□□□ -1.67
HSX1tR(CCU)J ARO4P32449 370 aaKnown RBP4.65□□□□□ -1.67
HSX1tR(CCU)J UMP1P38293 148 aa4.65□□□□□ -1.67
HSX1tR(CCU)J FCY21P40039 528 aa4.65□□□□□ -1.67
HSX1tR(CCU)J YER079WP40052 210 aaKnown RBP4.65□□□□□ -1.67
HSX1tR(CCU)J TAF4P50105 388 aa4.65□□□□□ -1.67
HSX1tR(CCU)J YDR248CQ03786 193 aa4.65□□□□□ -1.67
HSX1tR(CCU)J PEX27Q08580 376 aa4.65□□□□□ -1.67
HSX1tR(CCU)J HUT1Q12520 339 aa4.65□□□□□ -1.67
HSX1tR(CCU)J TDH2P00358 332 aaKnown RBP4.64□□□□□ -1.67
HSX1tR(CCU)J PEX4P29340 183 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YHL044WP38727 235 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YHK8P38776 514 aa4.64□□□□□ -1.67
HSX1tR(CCU)J LNP1P38878 278 aa4.64□□□□□ -1.67
HSX1tR(CCU)J RMD6P39975 231 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YER121WP40076 114 aa4.64□□□□□ -1.67
HSX1tR(CCU)J NCA3P46955 337 aa4.64□□□□□ -1.67
HSX1tR(CCU)J GPI14P47088 403 aaKnown RBP4.64□□□□□ -1.67
HSX1tR(CCU)J SSN8P47821 323 aa4.64□□□□□ -1.67
HSX1tR(CCU)J MRH4P53166 561 aa4.64□□□□□ -1.67
HSX1tR(CCU)J VHT1P53241 593 aa4.64□□□□□ -1.67
HSX1tR(CCU)J ERV29P53337 310 aa4.64□□□□□ -1.67
HSX1tR(CCU)J BUD25P85052 153 aa4.64□□□□□ -1.67
HSX1tR(CCU)J CTF19Q02732 369 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YMR254CQ04838 102 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YLR283WQ05867 314 aa4.64□□□□□ -1.67
HSX1tR(CCU)J KEI1Q06346 221 aa4.64□□□□□ -1.67
HSX1tR(CCU)J TPO3Q06451 622 aa4.64□□□□□ -1.67
HSX1tR(CCU)J GRC3Q07845 632 aa4.64□□□□□ -1.67
HSX1tR(CCU)J SOG2Q08817 791 aa4.64□□□□□ -1.67
HSX1tR(CCU)J YOR283WQ12040 230 aaKnown RBP4.64□□□□□ -1.67
HSX1tR(CCU)J INP53Q12271 1107 aa4.64□□□□□ -1.67
HSX1tR(CCU)J ERP4Q12450 207 aa4.64□□□□□ -1.67
HSX1tR(CCU)J UTP20P35194 2493 aaKnown RBP4.63□□□□□ -1.67
HSX1tR(CCU)J RPL39P04650 51 aa4.63□□□□□ -1.67
HSX1tR(CCU)J RPS31P05759 152 aaKnown RBP4.63□□□□□ -1.67
HSX1tR(CCU)J APA2P22108 325 aa4.63□□□□□ -1.67
HSX1tR(CCU)J VMA3P25515 160 aa4.63□□□□□ -1.67
HSX1tR(CCU)J RFA3P26755 122 aaKnown RBP4.63□□□□□ -1.67
HSX1tR(CCU)J PRE4P30657 266 aa4.63□□□□□ -1.67
HSX1tR(CCU)J HTD2P38790 280 aaKnown RBP4.63□□□□□ -1.67
HSX1tR(CCU)J YIL060WP40519 144 aa4.63□□□□□ -1.67
HSX1tR(CCU)J SGN1P40561 250 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
HSX1tR(CCU)J YIR020CP40575 100 aa4.63□□□□□ -1.67
HSX1tR(CCU)J MID1P41821 548 aa4.63□□□□□ -1.67
HSX1tR(CCU)J SER2P42941 309 aa4.63□□□□□ -1.67
HSX1tR(CCU)J GON7P46984 123 aa4.63□□□□□ -1.67
HSX1tR(CCU)J GWT1P47026 490 aa4.63□□□□□ -1.67
HSX1tR(CCU)J IRC18P47056 224 aa4.63□□□□□ -1.67
HSX1tR(CCU)J BXI1P48558 297 aa4.63□□□□□ -1.67
HSX1tR(CCU)J SKP1P52286 194 aa4.63□□□□□ -1.67
HSX1tR(CCU)J RAI1P53063 387 aaKnown RBP4.63□□□□□ -1.67
HSX1tR(CCU)J FMP48P53233 369 aa4.63□□□□□ -1.67
HSX1tR(CCU)J YPL067CQ02754 198 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms