RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C RIO2P40160 425 aaKnown RBP2.86□□□□□ -1.95
SHQ1YIL104C YMR144WP40214 342 aaKnown RBP2.86□□□□□ -1.95
SHQ1YIL104C FLX1P40464 311 aa2.86□□□□□ -1.95
SHQ1YIL104C YIL012WP40551 113 aa2.86□□□□□ -1.95
SHQ1YIL104C DOC1P53068 250 aa2.86□□□□□ -1.95
SHQ1YIL104C YGL159WP53110 370 aa2.86□□□□□ -1.95
SHQ1YIL104C CPR8P53728 308 aa2.86□□□□□ -1.95
SHQ1YIL104C YLR152CP54072 576 aa2.86□□□□□ -1.95
SHQ1YIL104C ACS1Q01574 713 aa2.86□□□□□ -1.95
SHQ1YIL104C RSM28Q03430 361 aa2.86□□□□□ -1.95
SHQ1YIL104C RRP17Q04031 235 aaPredicted RBP2.86□□□□□ -1.95
SHQ1YIL104C DLT1Q04216 342 aa2.86□□□□□ -1.95
SHQ1YIL104C GAL83Q04739 417 aa2.86□□□□□ -1.95
SHQ1YIL104C SNA4Q07549 140 aa2.86□□□□□ -1.95
SHQ1YIL104C TMC1Q08422 150 aaPredicted RBP2.86□□□□□ -1.95
SHQ1YIL104C RRS1Q08746 203 aaKnown RBP2.86□□□□□ -1.95
SHQ1YIL104C FRE3Q08905 711 aa2.86□□□□□ -1.95
SHQ1YIL104C Q0297Q9ZZV8 51 aa2.86□□□□□ -1.95
SHQ1YIL104C SEC16P48415 2195 aaKnown RBP2.86□□□□□ -1.95
SHQ1YIL104C MSW1P04803 379 aa2.85□□□□□ -1.95
SHQ1YIL104C ADK1P07170 222 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C MATALPHA1P0CY06 175 aa2.85□□□□□ -1.95
SHQ1YIL104C HMLALPHA1P0CY07 175 aa2.85□□□□□ -1.95
SHQ1YIL104C HXT2P23585 541 aa2.85□□□□□ -1.95
SHQ1YIL104C ARO4P32449 370 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C PAU2P32612 120 aa2.85□□□□□ -1.95
SHQ1YIL104C REC114P32841 428 aa2.85□□□□□ -1.95
SHQ1YIL104C CLB6P32943 380 aa2.85□□□□□ -1.95
SHQ1YIL104C YOX1P34161 385 aa2.85□□□□□ -1.95
SHQ1YIL104C APL3P38065 1025 aa2.85□□□□□ -1.95
SHQ1YIL104C TCM62P38228 572 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C YBR137WP38276 179 aa2.85□□□□□ -1.95
SHQ1YIL104C YHK8P38776 514 aa2.85□□□□□ -1.95
SHQ1YIL104C CTR2P38865 189 aa2.85□□□□□ -1.95
SHQ1YIL104C LSM4P40070 187 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C DDI1P40087 428 aa2.85□□□□□ -1.95
SHQ1YIL104C PIG2P40187 538 aa2.85□□□□□ -1.95
SHQ1YIL104C PMT5P52867 743 aa2.85□□□□□ -1.95
SHQ1YIL104C MRH4P53166 561 aa2.85□□□□□ -1.95
SHQ1YIL104C POP6P53218 158 aa2.85□□□□□ -1.95
SHQ1YIL104C RNH201P53942 307 aa2.85□□□□□ -1.95
SHQ1YIL104C SAM50P53969 484 aa2.85□□□□□ -1.95
SHQ1YIL104C CIK1Q01649 594 aa2.85□□□□□ -1.95
SHQ1YIL104C YMR279CQ03263 540 aa2.85□□□□□ -1.95
SHQ1YIL104C RVB1Q03940 463 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C NEJ1Q06148 342 aa2.85□□□□□ -1.95
SHQ1YIL104C ATG17Q06410 417 aa2.85□□□□□ -1.95
SHQ1YIL104C TSR2Q06672 205 aaKnown RBP2.85□□□□□ -1.95
SHQ1YIL104C ATG41Q12048 136 aa2.85□□□□□ -1.95
SHQ1YIL104C YOR029WQ12243 111 aa2.85□□□□□ -1.95
SHQ1YIL104C ORT1Q12375 292 aa2.85□□□□□ -1.95
SHQ1YIL104C TDH3P00359 332 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SHQ1YIL104C PET18P25362 215 aa2.84□□□□□ -1.95
SHQ1YIL104C PPZ2P33329 710 aa2.84□□□□□ -1.95
SHQ1YIL104C SFK1P35735 353 aa2.84□□□□□ -1.95
SHQ1YIL104C SSH1P38353 490 aaKnown RBP2.84□□□□□ -1.95
SHQ1YIL104C ECM14P38836 430 aa2.84□□□□□ -1.95
SHQ1YIL104C YND1P40009 630 aa2.84□□□□□ -1.95
SHQ1YIL104C INN1P53901 409 aa2.84□□□□□ -1.95
SHQ1YIL104C AAH1P53909 347 aa2.84□□□□□ -1.95
SHQ1YIL104C CRZ1P53968 678 aa2.84□□□□□ -1.95
SHQ1YIL104C GPI17Q04080 534 aa2.84□□□□□ -1.95
SHQ1YIL104C TPO3Q06451 622 aa2.84□□□□□ -1.95
SHQ1YIL104C MCM21Q06675 368 aa2.84□□□□□ -1.95
SHQ1YIL104C PEX27Q08580 376 aa2.84□□□□□ -1.95
SHQ1YIL104C YLR108CQ12259 485 aa2.84□□□□□ -1.95
SHQ1YIL104C MPD1Q12404 318 aaKnown RBP2.84□□□□□ -1.95
SHQ1YIL104C RRI1Q12468 440 aa2.84□□□□□ -1.95
SHQ1YIL104C DCP1Q12517 231 aaPredicted RBP2.84□□□□□ -1.95
SHQ1YIL104C BLM10P43583 2143 aa2.84□□□□□ -1.95
SHQ1YIL104C CDC28P00546 298 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C GCN4P03069 281 aa2.83□□□□□ -1.96
SHQ1YIL104C RPL39P04650 51 aa2.83□□□□□ -1.96
SHQ1YIL104C DSF1P0CX08 502 aa2.83□□□□□ -1.96
SHQ1YIL104C YNR073CP0CX09 502 aa2.83□□□□□ -1.96
SHQ1YIL104C RPL35AP0CX84 120 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C RPL35BP0CX85 120 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C RPL30P14120 105 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C SAG1P20840 650 aa2.83□□□□□ -1.96
SHQ1YIL104C MRPS28P21771 286 aa2.83□□□□□ -1.96
SHQ1YIL104C AHC2P25649 128 aa2.83□□□□□ -1.96
SHQ1YIL104C RPL5P26321 297 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C VAM7P32912 316 aa2.83□□□□□ -1.96
SHQ1YIL104C UTP11P34247 250 aaPredicted RBP2.83□□□□□ -1.96
SHQ1YIL104C MCH2P36032 473 aa2.83□□□□□ -1.96
SHQ1YIL104C RTT105P40063 208 aa2.83□□□□□ -1.96
SHQ1YIL104C GLR1P41921 483 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C EGT2P42835 1041 aa2.83□□□□□ -1.96
SHQ1YIL104C ERJ5P43613 295 aaPredicted RBP2.83□□□□□ -1.96
SHQ1YIL104C GWT1P47026 490 aa2.83□□□□□ -1.96
SHQ1YIL104C UBC13P52490 153 aa2.83□□□□□ -1.96
SHQ1YIL104C RAI1P53063 387 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C NSA1P53136 463 aaPredicted RBP2.83□□□□□ -1.96
SHQ1YIL104C YGR054WP53235 642 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C PXR1P53335 271 aaPredicted RBP2.83□□□□□ -1.96
SHQ1YIL104C ERV29P53337 310 aa2.83□□□□□ -1.96
SHQ1YIL104C TEX1P53851 422 aaKnown RBP2.83□□□□□ -1.96
SHQ1YIL104C RSM23Q01163 450 aa2.83□□□□□ -1.96
SHQ1YIL104C RCF1Q03713 159 aa2.83□□□□□ -1.96
SHQ1YIL104C GRX3Q03835 250 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms