RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	ATG7	P38862	630 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	VPS52	P39904	641 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	YEL073C	P39974	107 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	PDS1	P40316	373 aa	Predicted RBP	3.88	□□□□□ -1.79
RCM1	YNL022C	GAB1	P41733	394 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	YJR030C	P47101	745 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	YDL186W	P48568	277 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	DIA1	P54005	336 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	HXT11	P54862	567 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	SPR6	Q01684	191 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	VHS1	Q03785	461 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	BNA5	Q05979	453 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	ATG17	Q06410	417 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	GPI11	Q06636	219 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	YOL131W	Q08270	108 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	GEP3	Q08622	556 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	YDL009C	Q12210	107 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	RPN6	Q12377	434 aa		3.88	□□□□□ -1.79
RCM1	YNL022C	RHO1	P06780	209 aa	Known RBP	3.87	□□□□□ -1.79
RCM1	YNL022C	MRPS28	P21771	286 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	TRX3	P25372	127 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	PEX3	P28795	441 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	VMA5	P31412	392 aa	Known RBP	3.87	□□□□□ -1.79
RCM1	YNL022C	SEC17	P32602	292 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	SPC34	P36131	295 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	YBR241C	P38142	488 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	TDA11	P38854	504 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	FET3	P38993	636 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	GIM4	P40005	111 aa	Known RBP	3.87	□□□□□ -1.79
RCM1	YNL022C	AZF1	P41696	914 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	AGP3	P43548	558 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	SSN8	P47821	323 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	ZRG17	P53735	605 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	YNR048W	P53740	393 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	YNL095C	P53932	642 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	ODC1	Q03028	310 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	SDO1	Q07953	250 aa	Known RBP	3.87	□□□□□ -1.79
RCM1	YNL022C	TIM18	Q08749	192 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	RAX1	Q08760	435 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	YOP1	Q12402	180 aa		3.87	□□□□□ -1.79
RCM1	YNL022C	BEM2	P39960	2167 aa	Known RBP	3.87	□□□□□ -1.79
RCM1	YNL022C	TIM9	O74700	87 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	YKR104W	P0CE69	306 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	GPI12	P23797	304 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	CBT1	P36038	271 aa	Predicted RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	YPT35	P38815	214 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	AGE2	P40529	298 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	GWT1	P47026	490 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	VMA10	P48836	114 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	YNL140C	P53910	189 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	PEX12	Q04370	399 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	YMR034C	Q05131	434 aa	Predicted RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	YLR283W	Q05867	314 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	DTD1	Q07648	150 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	GRE1	Q08969	168 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	SAM4	Q08985	325 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	VPS68	Q12016	184 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	SRL2	Q12020	392 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	UBA3	Q99344	299 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	RPL42A	P0CX27	106 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	RPL42B	P0CX28	106 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	FBA1	P14540	359 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	STE18	P18852	110 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	SNF6	P18888	332 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	MXR2	P25566	168 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	TIP1	P27654	210 aa	Predicted RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	UBC8	P28263	218 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	BIG1	P38813	335 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	GGC1	P38988	300 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	RBG1	P39729	369 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	PMT4	P46971	762 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	BIR1	P47134	954 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	YGL159W	P53110	370 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	LSG1	P53145	640 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	POP6	P53218	158 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	RVB1	Q03940	463 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	NAT4	Q04751	285 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	MFG1	Q07684	458 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	WTM1	Q12363	437 aa	Known RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	PRP46	Q12417	451 aa	Predicted RBP	3.86	□□□□□ -1.79
RCM1	YNL022C	NAG1	Q8TGN9	163 aa		3.86	□□□□□ -1.79
RCM1	YNL022C	YPR117W	Q06116	2489 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	GDH1	P07262	454 aa	Known RBP	3.85	□□□□□ -1.79
RCM1	YNL022C	SPT15	P13393	240 aa	Known RBP	3.85	□□□□□ -1.79
RCM1	YNL022C	CAT2	P32796	670 aa	Known RBP	3.85	□□□□□ -1.79
RCM1	YNL022C	SPO23	P33757	523 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	RIB1	P38066	345 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	YBR285W	P38354	144 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	RCK1	P38622	512 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	PFS1	P38872	237 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	SHO1	P40073	367 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	CDC40	P40968	455 aa	Predicted RBP	3.85	□□□□□ -1.79
RCM1	YNL022C	MRX5	P47007	382 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	YMR254C	Q04838	102 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	PLB3	Q08108	686 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	YPL199C	Q08954	240 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	TPT1	Q12272	230 aa	Known RBP	3.85	□□□□□ -1.79
RCM1	YNL022C	MHF2	Q3E829	80 aa		3.85	□□□□□ -1.79
RCM1	YNL022C	YPR096C	O13587	100 aa		3.84	□□□□□ -1.8
RCM1	YNL022C	FAR1	P21268	830 aa		3.84	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms