RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C SNA4Q07549 140 aa8.63□□□□□ -1.03
YSR3YKR053C RTR2Q12378 196 aa8.63□□□□□ -1.03
YSR3YKR053C MRP1P10662 321 aaKnown RBP8.62□□□□□ -1.03
YSR3YKR053C RPL30P14120 105 aaKnown RBP8.62□□□□□ -1.03
YSR3YKR053C REC114P32841 428 aa8.62□□□□□ -1.03
YSR3YKR053C PAU24P38155 120 aa8.62□□□□□ -1.03
YSR3YKR053C GOS1P38736 223 aa8.62□□□□□ -1.03
YSR3YKR053C MSS11Q03825 758 aa8.62□□□□□ -1.03
YSR3YKR053C RFU1Q08003 200 aa8.62□□□□□ -1.03
YSR3YKR053C RDL1Q12305 139 aaKnown RBP8.62□□□□□ -1.03
YSR3YKR053C YPR1Q12458 312 aa8.62□□□□□ -1.03
YSR3YKR053C MSI1P13712 422 aa8.61□□□□□ -1.03
YSR3YKR053C FUN26P31381 517 aa8.61□□□□□ -1.03
YSR3YKR053C ABM1P47146 123 aa8.61□□□□□ -1.03
YSR3YKR053C YGL204CP53089 101 aa8.61□□□□□ -1.03
YSR3YKR053C FRE5Q08908 694 aa8.61□□□□□ -1.03
YSR3YKR053C MET17P06106 444 aa8.6□□□□□ -1.03
YSR3YKR053C PRE7P23724 241 aaKnown RBP8.6□□□□□ -1.03
YSR3YKR053C AFG1P32317 509 aa8.6□□□□□ -1.03
YSR3YKR053C DOA4P32571 926 aa8.6□□□□□ -1.03
YSR3YKR053C SDS24P38314 527 aa8.6□□□□□ -1.03
YSR3YKR053C NVJ1P38881 321 aa8.6□□□□□ -1.03
YSR3YKR053C ATF1P40353 525 aa8.6□□□□□ -1.03
YSR3YKR053C ERJ5P43613 295 aaPredicted RBP8.6□□□□□ -1.03
YSR3YKR053C CIN2P46670 268 aa8.6□□□□□ -1.03
YSR3YKR053C NEJ1Q06148 342 aa8.6□□□□□ -1.03
YSR3YKR053C RRP15Q06511 250 aaPredicted RBP8.6□□□□□ -1.03
YSR3YKR053C ERP4Q12450 207 aa8.6□□□□□ -1.03
YSR3YKR053C VMA6P32366 345 aaKnown RBP8.59□□□□□ -1.03
YSR3YKR053C AVT6P40074 448 aa8.59□□□□□ -1.03
YSR3YKR053C HLR1Q04429 423 aa8.59□□□□□ -1.03
YSR3YKR053C TY1A-NL1Q12391 440 aaKnown RBP8.59□□□□□ -1.03
YSR3YKR053C RPL15AP05748 204 aaKnown RBP8.58□□□□□ -1.04
YSR3YKR053C APA2P22108 325 aa8.58□□□□□ -1.04
YSR3YKR053C AHC2P25649 128 aa8.58□□□□□ -1.04
YSR3YKR053C YOX1P34161 385 aa8.58□□□□□ -1.04
YSR3YKR053C SSH1P38353 490 aaKnown RBP8.58□□□□□ -1.04
YSR3YKR053C SGN1P40561 250 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
YSR3YKR053C YGL159WP53110 370 aa8.58□□□□□ -1.04
YSR3YKR053C RPL15BP54780 204 aaPredicted RBP8.58□□□□□ -1.04
YSR3YKR053C YMR252CQ04814 134 aa8.58□□□□□ -1.04
YSR3YKR053C FRE8Q12209 686 aa8.58□□□□□ -1.04
YSR3YKR053C RBD2Q12270 262 aa8.58□□□□□ -1.04
YSR3YKR053C RPL39P04650 51 aa8.57□□□□□ -1.04
YSR3YKR053C SGA1P08019 549 aa8.57□□□□□ -1.04
YSR3YKR053C MATALPHA1P0CY06 175 aa8.57□□□□□ -1.04
YSR3YKR053C HMLALPHA1P0CY07 175 aa8.57□□□□□ -1.04
YSR3YKR053C SAG1P20840 650 aa8.57□□□□□ -1.04
YSR3YKR053C HXT2P23585 541 aa8.57□□□□□ -1.04
YSR3YKR053C MKS1P34072 584 aa8.57□□□□□ -1.04
YSR3YKR053C MTH1P35198 433 aa8.57□□□□□ -1.04
YSR3YKR053C TCM62P38228 572 aaKnown RBP8.57□□□□□ -1.04
YSR3YKR053C MSS4P38994 779 aa8.57□□□□□ -1.04
YSR3YKR053C DDI1P40087 428 aa8.57□□□□□ -1.04
YSR3YKR053C BNA2P47125 453 aa8.57□□□□□ -1.04
YSR3YKR053C LYS20P48570 428 aaKnown RBP8.57□□□□□ -1.04
YSR3YKR053C MOT3P54785 490 aaKnown RBP8.57□□□□□ -1.04
YSR3YKR053C YKR005CQ02203 525 aa8.57□□□□□ -1.04
YSR3YKR053C TPO3Q06451 622 aa8.57□□□□□ -1.04
YSR3YKR053C SSK1Q07084 712 aa8.57□□□□□ -1.04
YSR3YKR053C LYS21Q12122 440 aaKnown RBP8.57□□□□□ -1.04
YSR3YKR053C YLR108CQ12259 485 aa8.57□□□□□ -1.04
YSR3YKR053C QCR7P00128 127 aa8.56□□□□□ -1.04
YSR3YKR053C PPZ2P33329 710 aa8.56□□□□□ -1.04
YSR3YKR053C ZRT3P34240 503 aa8.56□□□□□ -1.04
YSR3YKR053C MED8P38304 223 aa8.56□□□□□ -1.04
YSR3YKR053C PHB2P50085 310 aa8.56□□□□□ -1.04
YSR3YKR053C YIP4P53093 235 aa8.56□□□□□ -1.04
YSR3YKR053C GEP7P53171 287 aa8.56□□□□□ -1.04
YSR3YKR053C POP6P53218 158 aa8.56□□□□□ -1.04
YSR3YKR053C SMM1P53720 384 aaKnown RBP8.56□□□□□ -1.04
YSR3YKR053C YDR248CQ03786 193 aa8.56□□□□□ -1.04
YSR3YKR053C SPR28Q04921 423 aa8.56□□□□□ -1.04
YSR3YKR053C PEX30Q06169 523 aa8.56□□□□□ -1.04
YSR3YKR053C YCL048W-AQ2V2Q2 79 aa8.56□□□□□ -1.04
YSR3YKR053C YBL113CQ7M4S9 792 aa8.56□□□□□ -1.04
YSR3YKR053C TDH2P00358 332 aaKnown RBP8.55□□□□□ -1.04
YSR3YKR053C PAU2P32612 120 aa8.55□□□□□ -1.04
YSR3YKR053C RIO2P40160 425 aaKnown RBP8.55□□□□□ -1.04
YSR3YKR053C AVT4P50944 713 aa8.55□□□□□ -1.04
YSR3YKR053C PMT5P52867 743 aa8.55□□□□□ -1.04
YSR3YKR053C TMA20P89886 181 aaPredicted RBP8.55□□□□□ -1.04
YSR3YKR053C MAK3Q03503 176 aa8.55□□□□□ -1.04
YSR3YKR053C MRX10Q05648 414 aa8.55□□□□□ -1.04
YSR3YKR053C CSI2Q08054 341 aa8.55□□□□□ -1.04
YSR3YKR053C CDC31P06704 161 aaKnown RBP8.54□□□□□ -1.04
YSR3YKR053C SPS4P09937 338 aa8.54□□□□□ -1.04
YSR3YKR053C RPB9P27999 122 aa8.54□□□□□ -1.04
YSR3YKR053C SFK1P35735 353 aa8.54□□□□□ -1.04
YSR3YKR053C RCN1P36054 211 aa8.54□□□□□ -1.04
YSR3YKR053C CTR2P38865 189 aa8.54□□□□□ -1.04
YSR3YKR053C PAM16P42949 149 aa8.54□□□□□ -1.04
YSR3YKR053C YHC3P47040 408 aa8.54□□□□□ -1.04
YSR3YKR053C YAE1P47118 141 aaPredicted RBP8.54□□□□□ -1.04
YSR3YKR053C TAF4P50105 388 aa8.54□□□□□ -1.04
YSR3YKR053C NSA1P53136 463 aaPredicted RBP8.54□□□□□ -1.04
YSR3YKR053C YNR064CP53750 290 aa8.54□□□□□ -1.04
YSR3YKR053C GRX3Q03835 250 aa8.54□□□□□ -1.04
YSR3YKR053C PIN3Q06449 215 aa8.54□□□□□ -1.04
YSR3YKR053C YLR099W-AQ3E798 87 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms