RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W YHR214C-DP0CX93 97 aa5.28□□□□□ -1.56
RPN7YPR108W NHP6BP11633 99 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W IFM1P25038 676 aa5.28□□□□□ -1.56
RPN7YPR108W SBA1P28707 216 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W MRP17P28778 131 aa5.28□□□□□ -1.56
RPN7YPR108W ATS1P31386 333 aa5.28□□□□□ -1.56
RPN7YPR108W SUA5P32579 426 aa5.28□□□□□ -1.56
RPN7YPR108W RPS27AP35997 82 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W SHG1P38337 142 aa5.28□□□□□ -1.56
RPN7YPR108W RPS27BP38711 82 aa5.28□□□□□ -1.56
RPN7YPR108W ANS1P38832 159 aa5.28□□□□□ -1.56
RPN7YPR108W PTI1P39927 425 aaPredicted RBP5.28□□□□□ -1.56
RPN7YPR108W PHM8P40025 321 aa5.28□□□□□ -1.56
RPN7YPR108W YER137CP40083 148 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W AVT7P40501 490 aa5.28□□□□□ -1.56
RPN7YPR108W BAP3P41815 604 aa5.28□□□□□ -1.56
RPN7YPR108W GNA1P43577 159 aaPredicted RBP5.28□□□□□ -1.56
RPN7YPR108W PMT3P47190 753 aa5.28□□□□□ -1.56
RPN7YPR108W ALG12P53730 551 aa5.28□□□□□ -1.56
RPN7YPR108W DID2P69771 204 aa5.28□□□□□ -1.56
RPN7YPR108W RPL6AQ02326 176 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W YML108WQ03759 105 aa5.28□□□□□ -1.56
RPN7YPR108W ORM2Q06144 216 aa5.28□□□□□ -1.56
RPN7YPR108W TAZ1Q06510 381 aa5.28□□□□□ -1.56
RPN7YPR108W RSC58Q07979 502 aa5.28□□□□□ -1.56
RPN7YPR108W RDR1Q08904 546 aa5.28□□□□□ -1.56
RPN7YPR108W NIP7Q08962 181 aaKnown RBP5.28□□□□□ -1.56
RPN7YPR108W TAD3Q9URQ3 322 aa5.28□□□□□ -1.56
RPN7YPR108W SOD2P00447 233 aa5.27□□□□□ -1.57
RPN7YPR108W KIN28P06242 306 aa5.27□□□□□ -1.57
RPN7YPR108W ARG80P07249 177 aa5.27□□□□□ -1.57
RPN7YPR108W CHO1P08456 276 aa5.27□□□□□ -1.57
RPN7YPR108W SSA3P09435 649 aaKnown RBP5.27□□□□□ -1.57
RPN7YPR108W HXT2P23585 541 aa5.27□□□□□ -1.57
RPN7YPR108W DBP2P24783 546 aaKnown RBP5.27□□□□□ -1.57
RPN7YPR108W RNQ1P25367 405 aa5.27□□□□□ -1.57
RPN7YPR108W ADH7P25377 361 aa5.27□□□□□ -1.57
RPN7YPR108W VMA3P25515 160 aa5.27□□□□□ -1.57
RPN7YPR108W PRE4P30657 266 aa5.27□□□□□ -1.57
RPN7YPR108W ACB1P31787 87 aa5.27□□□□□ -1.57
RPN7YPR108W ACH1P32316 526 aa5.27□□□□□ -1.57
RPN7YPR108W RNP1P32385 249 aa5.27□□□□□ -1.57
RPN7YPR108W PPQ1P32945 549 aa5.27□□□□□ -1.57
RPN7YPR108W HTD2P38790 280 aaKnown RBP5.27□□□□□ -1.57
RPN7YPR108W VMA7P39111 118 aa5.27□□□□□ -1.57
RPN7YPR108W CUP9P41817 306 aa5.27□□□□□ -1.57
RPN7YPR108W SLS1P42900 643 aa5.27□□□□□ -1.57
RPN7YPR108W SKP1P52286 194 aa5.27□□□□□ -1.57
RPN7YPR108W VHT1P53241 593 aa5.27□□□□□ -1.57
RPN7YPR108W PEX25Q02969 394 aa5.27□□□□□ -1.57
RPN7YPR108W HAS1Q03532 505 aaKnown RBP5.27□□□□□ -1.57
RPN7YPR108W INP1Q03694 420 aa5.27□□□□□ -1.57
RPN7YPR108W BNA7Q04066 261 aa5.27□□□□□ -1.57
RPN7YPR108W RBS1Q05672 457 aaKnown RBP5.27□□□□□ -1.57
RPN7YPR108W YLR031WQ07978 186 aa5.27□□□□□ -1.57
RPN7YPR108W YOL073CQ08232 322 aa5.27□□□□□ -1.57
RPN7YPR108W TDH2P00358 332 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W BAR1P12630 587 aa5.26□□□□□ -1.57
RPN7YPR108W URA6P15700 204 aa5.26□□□□□ -1.57
RPN7YPR108W SNF5P18480 905 aa5.26□□□□□ -1.57
RPN7YPR108W GAS1P22146 559 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W ERG8P24521 451 aa5.26□□□□□ -1.57
RPN7YPR108W MEK1P24719 497 aaPredicted RBP5.26□□□□□ -1.57
RPN7YPR108W CNE1P27825 502 aa5.26□□□□□ -1.57
RPN7YPR108W CAM1P29547 415 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W MRPL36P36531 177 aa5.26□□□□□ -1.57
RPN7YPR108W PEX32P38292 413 aa5.26□□□□□ -1.57
RPN7YPR108W SDS24P38314 527 aa5.26□□□□□ -1.57
RPN7YPR108W SSH1P38353 490 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W RRP4P38792 359 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W AIM46P38885 310 aa5.26□□□□□ -1.57
RPN7YPR108W VRG4P40107 337 aa5.26□□□□□ -1.57
RPN7YPR108W POP6P53218 158 aa5.26□□□□□ -1.57
RPN7YPR108W YGR266WP53326 701 aa5.26□□□□□ -1.57
RPN7YPR108W SAM50P53969 484 aa5.26□□□□□ -1.57
RPN7YPR108W SMX3P54999 86 aaPredicted RBP5.26□□□□□ -1.57
RPN7YPR108W RSM23Q01163 450 aa5.26□□□□□ -1.57
RPN7YPR108W CGI121Q03705 181 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W MSS11Q03825 758 aa5.26□□□□□ -1.57
RPN7YPR108W BER1Q06688 274 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W MIM1Q08176 113 aa5.26□□□□□ -1.57
RPN7YPR108W RAX1Q08760 435 aa5.26□□□□□ -1.57
RPN7YPR108W ATG41Q12048 136 aa5.26□□□□□ -1.57
RPN7YPR108W USB1Q12208 290 aaKnown RBP5.26□□□□□ -1.57
RPN7YPR108W TIR4Q12218 487 aaPredicted RBP5.26□□□□□ -1.57
RPN7YPR108W ISN1Q99312 450 aa5.26□□□□□ -1.57
RPN7YPR108W RPS13P05756 151 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W RPL1AP0CX43 217 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W RPL1BP0CX44 217 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W CTA1P15202 515 aa5.25□□□□□ -1.57
RPN7YPR108W UTR1P21373 530 aa5.25□□□□□ -1.57
RPN7YPR108W PTR2P32901 601 aa5.25□□□□□ -1.57
RPN7YPR108W PAD1P33751 242 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
RPN7YPR108W SEF1P34228 1148 aa5.25□□□□□ -1.57
RPN7YPR108W UBS1P38290 277 aa5.25□□□□□ -1.57
RPN7YPR108W ARO9P38840 513 aaPredicted RBP5.25□□□□□ -1.57
RPN7YPR108W BMT5P40493 336 aa5.25□□□□□ -1.57
RPN7YPR108W SPG5P42933 373 aa5.25□□□□□ -1.57
RPN7YPR108W NIT2P47016 307 aa5.25□□□□□ -1.57
RPN7YPR108W BPL1P48445 690 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms