RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W FUS3P16892 353 aaKnown RBP6.83□□□□□ -1.32
PEX28YHR150W SAC7P17121 654 aa6.83□□□□□ -1.32
PEX28YHR150W MRP17P28778 131 aa6.83□□□□□ -1.32
PEX28YHR150W ALG3P38179 458 aa6.83□□□□□ -1.32
PEX28YHR150W CHS7P38843 316 aa6.83□□□□□ -1.32
PEX28YHR150W AIM46P38885 310 aa6.83□□□□□ -1.32
PEX28YHR150W SKN7P38889 622 aa6.83□□□□□ -1.32
PEX28YHR150W SWM2P40342 146 aa6.83□□□□□ -1.32
PEX28YHR150W TAD2P47058 250 aa6.83□□□□□ -1.32
PEX28YHR150W RSM28Q03430 361 aa6.83□□□□□ -1.32
PEX28YHR150W STP3Q05937 343 aa6.83□□□□□ -1.32
PEX28YHR150W YPR127WQ06494 345 aa6.83□□□□□ -1.32
PEX28YHR150W YLR031WQ07978 186 aa6.83□□□□□ -1.32
PEX28YHR150W BTS1Q12051 335 aa6.83□□□□□ -1.32
PEX28YHR150W BEM2P39960 2167 aaKnown RBP6.82□□□□□ -1.32
PEX28YHR150W RPP1AP05318 106 aaPredicted RBP6.82□□□□□ -1.32
PEX28YHR150W GCD1P09032 578 aaPredicted RBP6.82□□□□□ -1.32
PEX28YHR150W YPK2P18961 677 aa6.82□□□□□ -1.32
PEX28YHR150W MRP20P32387 263 aa6.82□□□□□ -1.32
PEX28YHR150W MDH3P32419 343 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
PEX28YHR150W MKS1P34072 584 aa6.82□□□□□ -1.32
PEX28YHR150W CHK1P38147 527 aa6.82□□□□□ -1.32
PEX28YHR150W YBR238CP38330 731 aaKnown RBP6.82□□□□□ -1.32
PEX28YHR150W LYS20P48570 428 aaKnown RBP6.82□□□□□ -1.32
PEX28YHR150W TRM9P49957 279 aa6.82□□□□□ -1.32
PEX28YHR150W LYS5P50113 272 aa6.82□□□□□ -1.32
PEX28YHR150W ARG5,6Q01217 863 aa6.82□□□□□ -1.32
PEX28YHR150W YPR172WQ06608 200 aa6.82□□□□□ -1.32
PEX28YHR150W YDL129WQ07555 291 aa6.82□□□□□ -1.32
PEX28YHR150W RTK1Q12100 620 aaPredicted RBP6.82□□□□□ -1.32
PEX28YHR150W LYS21Q12122 440 aaKnown RBP6.82□□□□□ -1.32
PEX28YHR150W NPC2Q12408 173 aa6.82□□□□□ -1.32
PEX28YHR150W CNB1P25296 175 aa6.81□□□□□ -1.32
PEX28YHR150W OCA5P38738 679 aa6.81□□□□□ -1.32
PEX28YHR150W RPP1P38786 293 aa6.81□□□□□ -1.32
PEX28YHR150W LSM12P38828 187 aaKnown RBP6.81□□□□□ -1.32
PEX28YHR150W LOH1P47055 219 aa6.81□□□□□ -1.32
PEX28YHR150W ERV25P54837 211 aaKnown RBP6.81□□□□□ -1.32
PEX28YHR150W BUD25P85052 153 aa6.81□□□□□ -1.32
PEX28YHR150W YLR108CQ12259 485 aa6.81□□□□□ -1.32
PEX28YHR150W EAF3Q12432 401 aa6.81□□□□□ -1.32
PEX28YHR150W CPR2P23285 205 aa6.81□□□□□ -1.32
PEX28YHR150W HXT2P23585 541 aa6.81□□□□□ -1.32
PEX28YHR150W IMG1P25626 169 aa6.81□□□□□ -1.32
PEX28YHR150W CPR3P25719 182 aa6.81□□□□□ -1.32
PEX28YHR150W SUA5P32579 426 aa6.81□□□□□ -1.32
PEX28YHR150W CBT1P36038 271 aaPredicted RBP6.81□□□□□ -1.32
PEX28YHR150W VPS52P39904 641 aa6.81□□□□□ -1.32
PEX28YHR150W YIL060WP40519 144 aa6.81□□□□□ -1.32
PEX28YHR150W SLS1P42900 643 aa6.81□□□□□ -1.32
PEX28YHR150W RNH70P53331 553 aa6.81□□□□□ -1.32
PEX28YHR150W OGG1P53397 376 aaPredicted RBP6.81□□□□□ -1.32
PEX28YHR150W SOK2P53438 785 aaPredicted RBP6.81□□□□□ -1.32
PEX28YHR150W YNR014WP53719 212 aa6.81□□□□□ -1.32
PEX28YHR150W TRM13Q12383 476 aa6.81□□□□□ -1.32
PEX28YHR150W TDH2P00358 332 aaKnown RBP6.8□□□□□ -1.32
PEX28YHR150W REP2P03872 296 aa6.8□□□□□ -1.32
PEX28YHR150W PHO2P07269 559 aa6.8□□□□□ -1.32
PEX28YHR150W RPL1AP0CX43 217 aaKnown RBP6.8□□□□□ -1.32
PEX28YHR150W RPL1BP0CX44 217 aaKnown RBP6.8□□□□□ -1.32
PEX28YHR150W HOM3P10869 527 aa6.8□□□□□ -1.32
PEX28YHR150W MXR2P25566 168 aa6.8□□□□□ -1.32
PEX28YHR150W PDC2P32896 925 aa6.8□□□□□ -1.32
PEX28YHR150W SDS24P38314 527 aa6.8□□□□□ -1.32
PEX28YHR150W MTC4P38335 694 aaKnown RBP6.8□□□□□ -1.32
PEX28YHR150W FAA3P39002 694 aa6.8□□□□□ -1.32
PEX28YHR150W CFD1P40558 293 aa6.8□□□□□ -1.32
PEX28YHR150W YJR111CP47148 283 aaKnown RBP6.8□□□□□ -1.32
PEX28YHR150W YGL204CP53089 101 aa6.8□□□□□ -1.32
PEX28YHR150W GTF1P53260 183 aaPredicted RBP6.8□□□□□ -1.32
PEX28YHR150W RSM27P53305 110 aa6.8□□□□□ -1.32
PEX28YHR150W CAF40P53829 373 aa6.8□□□□□ -1.32
PEX28YHR150W DIC1Q06143 298 aa6.8□□□□□ -1.32
PEX28YHR150W ANT1Q06497 328 aa6.8□□□□□ -1.32
PEX28YHR150W YLR030WQ07967 263 aa6.8□□□□□ -1.32
PEX28YHR150W HRT1Q08273 121 aa6.8□□□□□ -1.32
PEX28YHR150W AI1P03875 834 aa6.79□□□□□ -1.32
PEX28YHR150W PUT1P09368 476 aa6.79□□□□□ -1.32
PEX28YHR150W MRP2P10663 115 aaPredicted RBP6.79□□□□□ -1.32
PEX28YHR150W MRT4P33201 236 aaKnown RBP6.79□□□□□ -1.32
PEX28YHR150W SSO2P39926 295 aa6.79□□□□□ -1.32
PEX28YHR150W NAS2P40555 220 aa6.79□□□□□ -1.32
PEX28YHR150W GLR1P41921 483 aaKnown RBP6.79□□□□□ -1.32
PEX28YHR150W CAF16P43569 289 aa6.79□□□□□ -1.32
PEX28YHR150W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
PEX28YHR150W SMA2Q04658 369 aa6.79□□□□□ -1.32
PEX28YHR150W YPR174CQ06616 221 aaPredicted RBP6.79□□□□□ -1.32
PEX28YHR150W RDR1Q08904 546 aa6.79□□□□□ -1.32
PEX28YHR150W TY1A-DR3Q12441 440 aa6.79□□□□□ -1.32
PEX28YHR150W STE50P25344 346 aa6.79□□□□□ -1.32
PEX28YHR150W NFS1P25374 497 aa6.79□□□□□ -1.32
PEX28YHR150W RPS27AP35997 82 aaKnown RBP6.79□□□□□ -1.32
PEX28YHR150W YKL071WP36086 256 aa6.79□□□□□ -1.32
PEX28YHR150W KAE1P36132 386 aa6.79□□□□□ -1.32
PEX28YHR150W VBA2P38358 474 aaKnown RBP6.79□□□□□ -1.32
PEX28YHR150W RPS27BP38711 82 aa6.79□□□□□ -1.32
PEX28YHR150W NSG1P38837 291 aa6.79□□□□□ -1.32
PEX28YHR150W BMT5P40493 336 aa6.79□□□□□ -1.32
PEX28YHR150W UTP25P40498 721 aaKnown RBP6.79□□□□□ -1.32
PEX28YHR150W OTU1P43558 301 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms