RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	TAT2	P38967	592 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	PET130	P47065	347 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	NUP42	P49686	430 aa	Known RBP	3.74	□□□□□ -1.81
PIM1	YBL022C	LSB1	P53281	241 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	YML096W	Q04489	525 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	HDA2	Q06629	674 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	AIM6	Q07716	390 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	YOL073C	Q08232	322 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	NUS1	Q12063	375 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	NDJ1	Q12366	352 aa		3.74	□□□□□ -1.81
PIM1	YBL022C	MES1	P00958	751 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	SAM1	P10659	382 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	PDA1	P16387	420 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	IXR1	P33417	597 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	MTR2	P34232	184 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	LOT5	P34234	306 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	RRN10	P38204	145 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	PNT1	P38969	423 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	SUR2	P38992	349 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	GDI1	P39958	451 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	YIL060W	P40519	144 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	OPT1	P40897	799 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	YGR127W	P53275	312 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	SMX3	P54999	86 aa	Predicted RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	YDR132C	Q03900	495 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	HPT1	Q04178	221 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	OPT2	Q06593	877 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	YOR365C	Q08844	703 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	RRP42	Q12277	265 aa	Predicted RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	TMA7	Q3E764	64 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	MPD2	Q99316	277 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	YML003W	P0CF16	290 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	RFA1	P22336	621 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	GPI12	P23797	304 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	PER1	P25625	357 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	COS9	P36034	407 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	ARO9	P38840	513 aa	Predicted RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	LSM5	P40089	93 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	APM1	Q00776	475 aa	Predicted RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	CWC27	Q02770	301 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	LRS4	Q04087	347 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	NAT4	Q04751	285 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	BDS1	Q08347	646 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	PRS5	Q12265	496 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	SNF8	Q12483	233 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	PHO2	P07269	559 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	SUA7	P29055	345 aa	Predicted RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	YHR035W	P38769	630 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	POP2	P39008	433 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	HEM14	P40012	539 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	RFC4	P40339	323 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	NEO1	P40527	1151 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	YVH1	Q02256	364 aa	Known RBP	3.73	□□□□□ -1.81
PIM1	YBL022C	YML018C	Q03730	393 aa		3.73	□□□□□ -1.81
PIM1	YBL022C	TDH2	P00358	332 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	RPL4A	P10664	362 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	MAG1	P22134	296 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	EXG1	P23776	448 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
PIM1	YBL022C	RML2	P32611	393 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	COX13	P32799	129 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YBR284W	P38150	797 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	MRP21	P38175	177 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	LDB7	P38210	180 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	RRP3	P38712	501 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	YHR054C	P38780	354 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	PHO90	P39535	881 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	GAT2	P40209	560 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	GWT1	P47026	490 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	LOH1	P47055	219 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	RPL4B	P49626	362 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	YGR035C	P53222	116 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YGR079W	P53249	370 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	UPS3	Q04006	179 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	FYV7	Q12247	151 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	AHC1	Q12433	566 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YJR112W-A	Q3E743	109 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	MEX67	Q99257	599 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	HIS1	P00498	297 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	PMA1	P05030	918 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	LSB5	P25369	354 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	MRPL27	P36526	146 aa	Predicted RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	AGP2	P38090	596 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	SHG1	P38337	142 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	CHL4	P38907	458 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YEL068C	P39977	110 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	SWM2	P40342	146 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	MID1	P41821	548 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	MRX6	P48564	524 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	RMD9	P53140	646 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	ALG12	P53730	551 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	OAZ1	Q02803	292 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	GRX8	Q05926	109 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YLR225C	Q05948	407 aa	Known RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	CRD1	Q07560	283 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YLR040C	Q07988	224 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	YTM1	Q12024	460 aa	Predicted RBP	3.72	□□□□□ -1.81
PIM1	YBL022C	YDR056C	Q12025	205 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	PER33	Q12144	273 aa		3.72	□□□□□ -1.81
PIM1	YBL022C	RDL1	Q12305	139 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms