RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	FSH3	Q99369	266 aa		1.59	□□□□□ -2.16
DOT6	YER088C	RPL43A	P0CX25	92 aa	Known RBP	1.58	□□□□□ -2.16
DOT6	YER088C	RPL43B	P0CX26	92 aa		1.58	□□□□□ -2.16
DOT6	YER088C	RPL4A	P10664	362 aa	Known RBP	1.58	□□□□□ -2.16
DOT6	YER088C	CYM1	P32898	989 aa		1.58	□□□□□ -2.16
DOT6	YER088C	GDT1	P38301	280 aa	Predicted RBP	1.58	□□□□□ -2.16
DOT6	YER088C	SIP3	P38717	1229 aa		1.58	□□□□□ -2.16
DOT6	YER088C	SEC9	P40357	651 aa		1.58	□□□□□ -2.16
DOT6	YER088C	RPL4B	P49626	362 aa	Known RBP	1.58	□□□□□ -2.16
DOT6	YER088C	MPS2	P53159	387 aa		1.58	□□□□□ -2.16
DOT6	YER088C	YNL143C	P53908	130 aa		1.58	□□□□□ -2.16
DOT6	YER088C	EOS1	P53938	366 aa		1.58	□□□□□ -2.16
DOT6	YER088C	DBP9	Q06218	594 aa	Known RBP	1.58	□□□□□ -2.16
DOT6	YER088C	CDD1	Q06549	142 aa		1.58	□□□□□ -2.16
DOT6	YER088C	YOL075C	Q08234	1294 aa		1.58	□□□□□ -2.16
DOT6	YER088C	APC5	Q08683	685 aa		1.58	□□□□□ -2.16
DOT6	YER088C	FRE8	Q12209	686 aa		1.58	□□□□□ -2.16
DOT6	YER088C	FOL3	Q12676	427 aa	Predicted RBP	1.58	□□□□□ -2.16
DOT6	YER088C	SAL1	D6W196	494 aa		1.57	□□□□□ -2.16
DOT6	YER088C	MATALPHA2	P0CY08	210 aa		1.57	□□□□□ -2.16
DOT6	YER088C	HMLALPHA2	P0CY09	210 aa		1.57	□□□□□ -2.16
DOT6	YER088C	FRS2	P15625	503 aa	Known RBP	1.57	□□□□□ -2.16
DOT6	YER088C	CKI1	P20485	582 aa		1.57	□□□□□ -2.16
DOT6	YER088C	SAG1	P20840	650 aa		1.57	□□□□□ -2.16
DOT6	YER088C	LDS1	P31379	325 aa		1.57	□□□□□ -2.16
DOT6	YER088C	SOL2	P37262	315 aa		1.57	□□□□□ -2.16
DOT6	YER088C	ECM13	P38195	257 aa		1.57	□□□□□ -2.16
DOT6	YER088C	BMT2	P38278	337 aa		1.57	□□□□□ -2.16
DOT6	YER088C	NAS2	P40555	220 aa		1.57	□□□□□ -2.16
DOT6	YER088C	YCH1	P42937	148 aa		1.57	□□□□□ -2.16
DOT6	YER088C	COQ5	P49017	307 aa		1.57	□□□□□ -2.16
DOT6	YER088C	ATP22	P50273	684 aa	Predicted RBP	1.57	□□□□□ -2.16
DOT6	YER088C	CDH1	P53197	566 aa		1.57	□□□□□ -2.16
DOT6	YER088C	SWS2	P53937	143 aa		1.57	□□□□□ -2.16
DOT6	YER088C	TRM82	Q03774	444 aa		1.57	□□□□□ -2.16
DOT6	YER088C	SAM4	Q08985	325 aa	Known RBP	1.57	□□□□□ -2.16
DOT6	YER088C	SRO7	Q12038	1033 aa		1.57	□□□□□ -2.16
DOT6	YER088C	TIR4	Q12218	487 aa	Predicted RBP	1.57	□□□□□ -2.16
DOT6	YER088C	RAX2	Q12465	1220 aa		1.57	□□□□□ -2.16
DOT6	YER088C	YBR056W-A	I2HB52	66 aa		1.57	□□□□□ -2.16
DOT6	YER088C	UTR1	P21373	530 aa		1.57	□□□□□ -2.16
DOT6	YER088C	DAL82	P21705	255 aa		1.57	□□□□□ -2.16
DOT6	YER088C	SGE1	P33335	543 aa		1.57	□□□□□ -2.16
DOT6	YER088C	MRPS5	P33759	307 aa		1.57	□□□□□ -2.16
DOT6	YER088C	LAS1	P36146	502 aa	Predicted RBP	1.57	□□□□□ -2.16
DOT6	YER088C	DTR1	P38125	572 aa		1.57	□□□□□ -2.16
DOT6	YER088C	IST2	P38250	946 aa		1.57	□□□□□ -2.16
DOT6	YER088C	AVT2	P39981	480 aa		1.57	□□□□□ -2.16
DOT6	YER088C	DSE1	P40077	573 aa		1.57	□□□□□ -2.16
DOT6	YER088C	TIF34	P40217	347 aa	Known RBP	1.57	□□□□□ -2.16
DOT6	YER088C	BIO3	P50277	480 aa		1.57	□□□□□ -2.16
DOT6	YER088C	KTR6	P54070	446 aa		1.57	□□□□□ -2.16
DOT6	YER088C	FSH2	Q05015	223 aa		1.57	□□□□□ -2.16
DOT6	YER088C	YOL024W	Q08172	172 aa		1.57	□□□□□ -2.16
DOT6	YER088C	RPN8	Q08723	338 aa	Known RBP	1.57	□□□□□ -2.16
DOT6	YER088C	NFI1	Q12216	726 aa		1.57	□□□□□ -2.16
DOT6	YER088C	GIS3	Q12418	502 aa		1.57	□□□□□ -2.16
DOT6	YER088C	UBR1	P19812	1950 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RAD3	P06839	778 aa		1.56	□□□□□ -2.16
DOT6	YER088C	PUT4	P15380	627 aa		1.56	□□□□□ -2.16
DOT6	YER088C	MXR2	P25566	168 aa		1.56	□□□□□ -2.16
DOT6	YER088C	CAJ1	P39101	391 aa		1.56	□□□□□ -2.16
DOT6	YER088C	UFE1	P41834	346 aa		1.56	□□□□□ -2.16
DOT6	YER088C	YHC3	P47040	408 aa		1.56	□□□□□ -2.16
DOT6	YER088C	VEL1	P53058	206 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RTC4	P53850	401 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RNY1	Q02933	434 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	YPL113C	Q02961	396 aa		1.56	□□□□□ -2.16
DOT6	YER088C	ECM11	Q04110	302 aa		1.56	□□□□□ -2.16
DOT6	YER088C	SMP3	Q04174	516 aa		1.56	□□□□□ -2.16
DOT6	YER088C	YDR115W	Q04598	105 aa		1.56	□□□□□ -2.16
DOT6	YER088C	PML1	Q07930	204 aa	Predicted RBP	1.56	□□□□□ -2.16
DOT6	YER088C	HMS1	Q12398	434 aa		1.56	□□□□□ -2.16
DOT6	YER088C	IPP1	P00817	287 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	RAD1	P06777	1100 aa		1.56	□□□□□ -2.16
DOT6	YER088C	STE3	P06783	470 aa		1.56	□□□□□ -2.16
DOT6	YER088C	VPS1	P21576	704 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	PHO84	P25297	587 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	MKK1	P32490	508 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RPS0A	P32905	252 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	CTM1	P38818	585 aa		1.56	□□□□□ -2.16
DOT6	YER088C	PEX22	P39718	180 aa		1.56	□□□□□ -2.16
DOT6	YER088C	SNL1	P40548	159 aa		1.56	□□□□□ -2.16
DOT6	YER088C	DSN1	P40568	576 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RPA34	P47006	233 aa	Predicted RBP	1.56	□□□□□ -2.16
DOT6	YER088C	HSH155	P49955	971 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	LSG1	P53145	640 aa	Known RBP	1.56	□□□□□ -2.16
DOT6	YER088C	YGR067C	P53243	804 aa		1.56	□□□□□ -2.16
DOT6	YER088C	NAT4	Q04751	285 aa		1.56	□□□□□ -2.16
DOT6	YER088C	PSY3	Q12318	242 aa		1.56	□□□□□ -2.16
DOT6	YER088C	RPN6	Q12377	434 aa		1.56	□□□□□ -2.16
DOT6	YER088C	UBA3	Q99344	299 aa		1.56	□□□□□ -2.16
DOT6	YER088C	YBR241C	P38142	488 aa		1.55	□□□□□ -2.16
DOT6	YER088C	PEX32	P38292	413 aa		1.55	□□□□□ -2.16
DOT6	YER088C	YHR182W	P38870	785 aa		1.55	□□□□□ -2.16
DOT6	YER088C	YMR134W	P40207	237 aa		1.55	□□□□□ -2.16
DOT6	YER088C	RSM25	P40496	264 aa		1.55	□□□□□ -2.16
DOT6	YER088C	YJR030C	P47101	745 aa		1.55	□□□□□ -2.16
DOT6	YER088C	YGR016W	P53209	190 aa		1.55	□□□□□ -2.16
DOT6	YER088C	AQR1	P53943	586 aa		1.55	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms