RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W FMP48P53233 369 aa3.73□□□□□ -1.81
TAF4YMR005W VTI1Q04338 217 aa3.73□□□□□ -1.81
TAF4YMR005W ECM5Q03214 1411 aa3.72□□□□□ -1.81
TAF4YMR005W TRX1P22217 103 aaKnown RBP3.72□□□□□ -1.81
TAF4YMR005W CTM1P38818 585 aa3.72□□□□□ -1.81
TAF4YMR005W STE23Q06010 1027 aa3.72□□□□□ -1.81
TAF4YMR005W YLR012CQ07927 99 aa3.72□□□□□ -1.81
TAF4YMR005W RPL18AP0CX49 186 aaKnown RBP3.71□□□□□ -1.82
TAF4YMR005W RPL18BP0CX50 186 aaKnown RBP3.71□□□□□ -1.82
TAF4YMR005W AGA2P32781 87 aa3.71□□□□□ -1.82
TAF4YMR005W BUD2P33314 1104 aa3.71□□□□□ -1.82
TAF4YMR005W YMR262WP38430 313 aa3.71□□□□□ -1.82
TAF4YMR005W YIL054WP40524 105 aa3.71□□□□□ -1.82
TAF4YMR005W CPR7P47103 393 aa3.71□□□□□ -1.82
TAF4YMR005W SMD1Q02260 146 aaPredicted RBP3.71□□□□□ -1.82
TAF4YMR005W ECM19Q06011 112 aa3.71□□□□□ -1.82
TAF4YMR005W DIB1Q06819 143 aaPredicted RBP3.71□□□□□ -1.82
TAF4YMR005W MIM1Q08176 113 aa3.71□□□□□ -1.82
TAF4YMR005W CDC37P06101 506 aaKnown RBP3.7□□□□□ -1.82
TAF4YMR005W CPT1P17898 393 aa3.7□□□□□ -1.82
TAF4YMR005W DSE1P40077 573 aa3.7□□□□□ -1.82
TAF4YMR005W MGR3Q04472 501 aa3.7□□□□□ -1.82
TAF4YMR005W CUP2P15315 225 aa3.69□□□□□ -1.82
TAF4YMR005W YPS1P32329 569 aa3.69□□□□□ -1.82
TAF4YMR005W UTP25P40498 721 aaKnown RBP3.69□□□□□ -1.82
TAF4YMR005W INA22P40576 216 aa3.69□□□□□ -1.82
TAF4YMR005W COS4P43542 379 aa3.69□□□□□ -1.82
TAF4YMR005W UBX2Q04228 584 aa3.69□□□□□ -1.82
TAF4YMR005W YPL245WQ12179 454 aaKnown RBP3.69□□□□□ -1.82
TAF4YMR005W BI3Q9ZZW7 517 aa3.69□□□□□ -1.82
TAF4YMR005W RPB9P27999 122 aa3.68□□□□□ -1.82
TAF4YMR005W SLX1P38324 304 aa3.68□□□□□ -1.82
TAF4YMR005W SLM1P40485 686 aa3.68□□□□□ -1.82
TAF4YMR005W YIL059CP40520 121 aa3.68□□□□□ -1.82
TAF4YMR005W IRC4Q03036 179 aa3.68□□□□□ -1.82
TAF4YMR005W RFM1Q12192 310 aa3.68□□□□□ -1.82
TAF4YMR005W HIR3P47171 1648 aa3.67□□□□□ -1.82
TAF4YMR005W ERD1P16151 362 aa3.67□□□□□ -1.82
TAF4YMR005W MRPL20P22354 195 aaPredicted RBP3.67□□□□□ -1.82
TAF4YMR005W AIM20P40451 204 aa3.67□□□□□ -1.82
TAF4YMR005W YGL118CP53132 145 aa3.67□□□□□ -1.82
TAF4YMR005W TRM10Q12400 293 aa3.67□□□□□ -1.82
TAF4YMR005W IME2P32581 645 aa3.66□□□□□ -1.82
TAF4YMR005W PET8P38921 284 aa3.66□□□□□ -1.82
TAF4YMR005W SSO2P39926 295 aa3.66□□□□□ -1.82
TAF4YMR005W YFL040WP43562 540 aa3.66□□□□□ -1.82
TAF4YMR005W ASG7P46993 209 aa3.66□□□□□ -1.82
TAF4YMR005W CAX4P53223 239 aa3.66□□□□□ -1.82
TAF4YMR005W YNR066CP53752 436 aa3.66□□□□□ -1.82
TAF4YMR005W YPL080CQ02826 108 aa3.66□□□□□ -1.82
TAF4YMR005W CAB5Q03941 241 aa3.66□□□□□ -1.82
TAF4YMR005W VPS20Q04272 221 aa3.66□□□□□ -1.82
TAF4YMR005W TFC7Q12415 435 aa3.66□□□□□ -1.82
TAF4YMR005W BUD4P47136 1447 aa3.65□□□□□ -1.83
TAF4YMR005W PET18P25362 215 aa3.65□□□□□ -1.83
TAF4YMR005W YKL162CP36052 402 aa3.65□□□□□ -1.83
TAF4YMR005W YHR035WP38769 630 aa3.65□□□□□ -1.83
TAF4YMR005W END3P39013 349 aa3.65□□□□□ -1.83
TAF4YMR005W YLR297WQ05899 129 aa3.65□□□□□ -1.83
TAF4YMR005W KRR1P25586 316 aaPredicted RBP3.64□□□□□ -1.83
TAF4YMR005W ZRT1P32804 376 aa3.64□□□□□ -1.83
TAF4YMR005W SWC5P38326 303 aa3.64□□□□□ -1.83
TAF4YMR005W SOP4P39543 234 aaPredicted RBP3.64□□□□□ -1.83
TAF4YMR005W OKP1P53298 406 aa3.64□□□□□ -1.83
TAF4YMR005W PRO2P54885 456 aaKnown RBP3.64□□□□□ -1.83
TAF4YMR005W SNX41Q04053 625 aa3.64□□□□□ -1.83
TAF4YMR005W SAM4Q08985 325 aaKnown RBP3.64□□□□□ -1.83
TAF4YMR005W PRP46Q12417 451 aaPredicted RBP3.64□□□□□ -1.83
TAF4YMR005W XRN1P22147 1528 aaKnown RBP3.64□□□□□ -1.83
TAF4YMR005W MSS116P15424 664 aaKnown RBP3.63□□□□□ -1.83
TAF4YMR005W ASP1P38986 381 aaPredicted RBP3.63□□□□□ -1.83
TAF4YMR005W VIK1Q12045 647 aa3.63□□□□□ -1.83
TAF4YMR005W UTP23Q12339 254 aaKnown RBP3.63□□□□□ -1.83
TAF4YMR005W YPR1Q12458 312 aa3.63□□□□□ -1.83
TAF4YMR005W CBP2P03874 630 aaPredicted RBP3.62□□□□□ -1.83
TAF4YMR005W INO2P26798 304 aa3.62□□□□□ -1.83
TAF4YMR005W SUR1P33300 382 aa3.62□□□□□ -1.83
TAF4YMR005W RTC5Q12108 567 aaKnown RBP3.62□□□□□ -1.83
TAF4YMR005W PAA1Q12447 191 aaKnown RBP3.62□□□□□ -1.83
TAF4YMR005W THO2P53552 1597 aaKnown RBP3.61□□□□□ -1.83
TAF4YMR005W FET3P38993 636 aa3.61□□□□□ -1.83
TAF4YMR005W SPO73P40031 143 aa3.61□□□□□ -1.83
TAF4YMR005W RPN14P53196 417 aa3.61□□□□□ -1.83
TAF4YMR005W REX3Q12090 404 aa3.61□□□□□ -1.83
TAF4YMR005W ERP3Q12403 225 aa3.61□□□□□ -1.83
TAF4YMR005W TAF2P23255 1407 aa3.61□□□□□ -1.83
TAF4YMR005W MDS3P53094 1487 aa3.6□□□□□ -1.83
TAF4YMR005W STF1P01098 86 aa3.6□□□□□ -1.83
TAF4YMR005W YDR089WP38966 869 aa3.6□□□□□ -1.83
TAF4YMR005W POP2P39008 433 aa3.6□□□□□ -1.83
TAF4YMR005W ABZ2Q03266 374 aa3.6□□□□□ -1.83
TAF4YMR005W SEC13Q04491 297 aaKnown RBP3.6□□□□□ -1.83
TAF4YMR005W YOR292CQ08743 309 aa3.6□□□□□ -1.83
TAF4YMR005W LAG2Q92325 660 aa3.6□□□□□ -1.83
TAF4YMR005W TDH3P00359 332 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
TAF4YMR005W MCH2P36032 473 aa3.59□□□□□ -1.83
TAF4YMR005W EDC2P40023 145 aaPredicted RBP3.59□□□□□ -1.83
TAF4YMR005W YGR266WP53326 701 aa3.59□□□□□ -1.83
TAF4YMR005W ACT1P60010 375 aaKnown RBP3.59□□□□□ -1.83
TAF4YMR005W PBP4Q07362 185 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms