RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PAD1P33751 242 aaKnown RBP RIP-Chip data11.64□□□□□ -0.55not detected
SHU1YHL006C MRPS5P33759 307 aa11.64□□□□□ -0.55
SHU1YHL006C ISC1P40015 477 aaKnown RBP11.64□□□□□ -0.55
SHU1YHL006C PRM8P53174 237 aa11.64□□□□□ -0.55
SHU1YHL006C ASI1P54074 624 aa11.64□□□□□ -0.55
SHU1YHL006C ACS1Q01574 713 aa11.64□□□□□ -0.55
SHU1YHL006C RCE1Q03530 315 aa11.64□□□□□ -0.55
SHU1YHL006C SSY1Q03770 852 aa11.64□□□□□ -0.55
SHU1YHL006C PRB1P09232 635 aa11.63□□□□□ -0.55
SHU1YHL006C EXG1P23776 448 aaKnown RBP11.63□□□□□ -0.55
SHU1YHL006C GIT1P25346 518 aa11.63□□□□□ -0.55
SHU1YHL006C RRP7P25368 297 aaPredicted RBP11.63□□□□□ -0.55
SHU1YHL006C PPA2P28239 310 aa11.63□□□□□ -0.55
SHU1YHL006C CAM1P29547 415 aaKnown RBP11.63□□□□□ -0.55
SHU1YHL006C MDH3P32419 343 aaKnown RBP RIP-Chip data11.63□□□□□ -0.55not detected
SHU1YHL006C POP1P41812 875 aa11.63□□□□□ -0.55
SHU1YHL006C HMS2P47175 358 aa11.63□□□□□ -0.55
SHU1YHL006C RTC5Q12108 567 aaKnown RBP11.63□□□□□ -0.55
SHU1YHL006C Q0297Q9ZZV8 51 aa11.63□□□□□ -0.55
SHU1YHL006C SPO73P40031 143 aa11.62□□□□□ -0.55
SHU1YHL006C PRE6P40303 254 aaKnown RBP11.62□□□□□ -0.55
SHU1YHL006C YTA6P40328 754 aa11.62□□□□□ -0.55
SHU1YHL006C COS1P53822 381 aa11.62□□□□□ -0.55
SHU1YHL006C CTS2Q06350 511 aa11.62□□□□□ -0.55
SHU1YHL006C RTC2P38279 296 aa11.61□□□□□ -0.55
SHU1YHL006C YBR220CP38318 560 aa11.61□□□□□ -0.55
SHU1YHL006C YER084WP40057 128 aa11.61□□□□□ -0.55
SHU1YHL006C MRK1P50873 501 aa11.61□□□□□ -0.55
SHU1YHL006C RPL6AQ02326 176 aaKnown RBP11.61□□□□□ -0.55
SHU1YHL006C TMC1Q08422 150 aaPredicted RBP11.61□□□□□ -0.55
SHU1YHL006C WSC3Q12215 556 aa11.61□□□□□ -0.55
SHU1YHL006C YDL007C-AQ2V2Q0 85 aa11.61□□□□□ -0.55
SHU1YHL006C BPH1P25356 2167 aa11.61□□□□□ -0.55
SHU1YHL006C RPS16AP0CX51 143 aaKnown RBP11.6□□□□□ -0.55
SHU1YHL006C RPS16BP0CX52 143 aaKnown RBP11.6□□□□□ -0.55
SHU1YHL006C DPM1P14020 267 aaKnown RBP11.6□□□□□ -0.55
SHU1YHL006C PTP2P29461 750 aa11.6□□□□□ -0.55
SHU1YHL006C CDC3P32457 520 aaKnown RBP11.6□□□□□ -0.55
SHU1YHL006C IDS2P46958 469 aa11.6□□□□□ -0.55
SHU1YHL006C NDL1Q06568 189 aa11.6□□□□□ -0.55
SHU1YHL006C YPL225WQ08971 146 aaKnown RBP11.6□□□□□ -0.55
SHU1YHL006C SNF6P18888 332 aa11.59□□□□□ -0.55
SHU1YHL006C UBC8P28263 218 aa11.59□□□□□ -0.55
SHU1YHL006C APE2P32454 952 aaKnown RBP11.59□□□□□ -0.55
SHU1YHL006C PRP19P32523 503 aaKnown RBP11.59□□□□□ -0.55
SHU1YHL006C STB1P42845 420 aa11.59□□□□□ -0.55
SHU1YHL006C QRI1P43123 477 aaKnown RBP11.59□□□□□ -0.55
SHU1YHL006C AGP3P43548 558 aa11.59□□□□□ -0.55
SHU1YHL006C DPB11P47027 764 aaPredicted RBP11.59□□□□□ -0.55
SHU1YHL006C MDE1P47095 244 aa11.59□□□□□ -0.55
SHU1YHL006C ABZ2Q03266 374 aa11.59□□□□□ -0.55
SHU1YHL006C TFB3Q03290 321 aa11.59□□□□□ -0.55
SHU1YHL006C RVB1Q03940 463 aaKnown RBP11.59□□□□□ -0.55
SHU1YHL006C PML1Q07930 204 aaPredicted RBP11.59□□□□□ -0.55
SHU1YHL006C MIM1Q08176 113 aa11.59□□□□□ -0.55
SHU1YHL006C CHA4P43634 648 aa11.58□□□□□ -0.56
SHU1YHL006C NIT3P49954 291 aa11.58□□□□□ -0.56
SHU1YHL006C SIP18P50263 79 aa11.58□□□□□ -0.56
SHU1YHL006C YGL101WP53144 215 aa11.58□□□□□ -0.56
SHU1YHL006C YGR016WP53209 190 aa11.58□□□□□ -0.56
SHU1YHL006C YDR239CQ03780 787 aa11.58□□□□□ -0.56
SHU1YHL006C DTD1Q07648 150 aaKnown RBP11.58□□□□□ -0.56
SHU1YHL006C RSC58Q07979 502 aa11.58□□□□□ -0.56
SHU1YHL006C RPL35AP0CX84 120 aaKnown RBP11.57□□□□□ -0.56
SHU1YHL006C RPL35BP0CX85 120 aaKnown RBP11.57□□□□□ -0.56
SHU1YHL006C SPO7P18410 259 aa11.57□□□□□ -0.56
SHU1YHL006C DBF20P32328 564 aa11.57□□□□□ -0.56
SHU1YHL006C MRPL6P32904 214 aa11.57□□□□□ -0.56
SHU1YHL006C YBR063CP38083 404 aa11.57□□□□□ -0.56
SHU1YHL006C SIC1P38634 284 aa11.57□□□□□ -0.56
SHU1YHL006C YAR028WP39548 234 aa11.57□□□□□ -0.56
SHU1YHL006C QRI7P43122 407 aa11.57□□□□□ -0.56
SHU1YHL006C FAR7P43592 221 aa11.57□□□□□ -0.56
SHU1YHL006C UIP4Q08926 304 aa11.57□□□□□ -0.56
SHU1YHL006C VIK1Q12045 647 aa11.57□□□□□ -0.56
SHU1YHL006C RTN2Q12443 393 aa11.57□□□□□ -0.56
SHU1YHL006C SNF4P12904 322 aa11.56□□□□□ -0.56
SHU1YHL006C BUD5P25300 642 aaPredicted RBP11.56□□□□□ -0.56
SHU1YHL006C SED4P25365 1065 aa11.56□□□□□ -0.56
SHU1YHL006C VPH2P32341 215 aa11.56□□□□□ -0.56
SHU1YHL006C MPH1P40562 993 aa11.56□□□□□ -0.56
SHU1YHL006C SCY1P53009 804 aa11.56□□□□□ -0.56
SHU1YHL006C MAL12P53341 584 aa11.56□□□□□ -0.56
SHU1YHL006C RRN9P53437 365 aa11.56□□□□□ -0.56
SHU1YHL006C RSA3Q05942 220 aaKnown RBP11.56□□□□□ -0.56
SHU1YHL006C RNH203Q12338 110 aa11.56□□□□□ -0.56
SHU1YHL006C YIL012WP40551 113 aa11.55□□□□□ -0.56
SHU1YHL006C TEX1P53851 422 aaKnown RBP11.55□□□□□ -0.56
SHU1YHL006C YNL165WP53891 406 aa11.55□□□□□ -0.56
SHU1YHL006C RSM28Q03430 361 aa11.55□□□□□ -0.56
SHU1YHL006C BNA7Q04066 261 aa11.55□□□□□ -0.56
SHU1YHL006C SIA1Q12212 622 aa11.55□□□□□ -0.56
SHU1YHL006C URE2P23202 354 aaKnown RBP11.54□□□□□ -0.56
SHU1YHL006C CNA1P23287 553 aa11.54□□□□□ -0.56
SHU1YHL006C AHP1P38013 176 aaKnown RBP11.54□□□□□ -0.56
SHU1YHL006C RPS20P38701 121 aaKnown RBP11.54□□□□□ -0.56
SHU1YHL006C SBE22P38814 852 aa11.54□□□□□ -0.56
SHU1YHL006C ASI2P53895 289 aa11.54□□□□□ -0.56
SHU1YHL006C APM1Q00776 475 aaPredicted RBP11.54□□□□□ -0.56
SHU1YHL006C YMR226CQ05016 267 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms