RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C ODC1Q03028 310 aa1.73□□□□□ -2.13
PRE4YFR050C SVL3Q03088 825 aaKnown RBP1.73□□□□□ -2.13
PRE4YFR050C APC4Q04601 652 aa1.73□□□□□ -2.13
PRE4YFR050C FRE8Q12209 686 aa1.73□□□□□ -2.13
PRE4YFR050C DCC1P25559 380 aa1.72□□□□□ -2.13
PRE4YFR050C SPB1P25582 841 aaPredicted RBP1.72□□□□□ -2.13
PRE4YFR050C ARO2P28777 376 aaKnown RBP1.72□□□□□ -2.13
PRE4YFR050C RAD5P32849 1169 aaPredicted RBP1.72□□□□□ -2.13
PRE4YFR050C SDH3P33421 198 aa1.72□□□□□ -2.13
PRE4YFR050C SRB2P34162 210 aa1.72□□□□□ -2.13
PRE4YFR050C TPO5P36029 618 aa1.72□□□□□ -2.13
PRE4YFR050C YEL028WP39989 153 aa1.72□□□□□ -2.13
PRE4YFR050C HXT14P42833 540 aa1.72□□□□□ -2.13
PRE4YFR050C YGR210CP42942 411 aa1.72□□□□□ -2.13
PRE4YFR050C RRT5P43607 289 aa1.72□□□□□ -2.13
PRE4YFR050C SSN8P47821 323 aa1.72□□□□□ -2.13
PRE4YFR050C YGR149WP48236 432 aa1.72□□□□□ -2.13
PRE4YFR050C SDT1P53078 280 aa1.72□□□□□ -2.13
PRE4YFR050C PEX31P53203 462 aa1.72□□□□□ -2.13
PRE4YFR050C PCP1P53259 346 aa1.72□□□□□ -2.13
PRE4YFR050C SED1Q01589 338 aa1.72□□□□□ -2.13
PRE4YFR050C MRP51Q02950 344 aa1.72□□□□□ -2.13
PRE4YFR050C CCE1Q03702 353 aa1.72□□□□□ -2.13
PRE4YFR050C YPR174CQ06616 221 aaPredicted RBP1.72□□□□□ -2.13
PRE4YFR050C YDL121CQ07541 149 aa1.72□□□□□ -2.13
PRE4YFR050C ARG3P05150 338 aa1.71□□□□□ -2.14
PRE4YFR050C SPS4P09937 338 aa1.71□□□□□ -2.14
PRE4YFR050C RPL3P14126 387 aaKnown RBP1.71□□□□□ -2.14
PRE4YFR050C TFS1P14306 219 aa1.71□□□□□ -2.14
PRE4YFR050C ATP10P18496 279 aa1.71□□□□□ -2.14
PRE4YFR050C SPS22P25380 463 aa1.71□□□□□ -2.14
PRE4YFR050C APE2P32454 952 aaKnown RBP1.71□□□□□ -2.14
PRE4YFR050C YEF1P32622 495 aa1.71□□□□□ -2.14
PRE4YFR050C GYP6P32806 458 aa1.71□□□□□ -2.14
PRE4YFR050C STB6P36085 766 aa1.71□□□□□ -2.14
PRE4YFR050C THI2P38141 450 aa1.71□□□□□ -2.14
PRE4YFR050C RIB5P38145 238 aa1.71□□□□□ -2.14
PRE4YFR050C OTU2P38747 307 aaKnown RBP1.71□□□□□ -2.14
PRE4YFR050C PRE5P40302 234 aaKnown RBP1.71□□□□□ -2.14
PRE4YFR050C OST1P41543 476 aaKnown RBP1.71□□□□□ -2.14
PRE4YFR050C BUD13P46947 266 aaPredicted RBP1.71□□□□□ -2.14
PRE4YFR050C YIP1P53039 248 aa1.71□□□□□ -2.14
PRE4YFR050C GIR2Q03768 265 aaPredicted RBP1.71□□□□□ -2.14
PRE4YFR050C SRL2Q12020 392 aa1.71□□□□□ -2.14
PRE4YFR050C ERV2Q12284 196 aa1.71□□□□□ -2.14
PRE4YFR050C PET123P17558 318 aa1.7□□□□□ -2.14
PRE4YFR050C SEC66P33754 206 aa1.7□□□□□ -2.14
PRE4YFR050C UTP9P38882 575 aaKnown RBP1.7□□□□□ -2.14
PRE4YFR050C MET18P40469 1032 aa1.7□□□□□ -2.14
PRE4YFR050C HST1P53685 503 aa1.7□□□□□ -2.14
PRE4YFR050C YDR387CQ04162 555 aa1.7□□□□□ -2.14
PRE4YFR050C RRG7Q08774 242 aaPredicted RBP1.7□□□□□ -2.14
PRE4YFR050C PGC1Q08959 321 aa1.7□□□□□ -2.14
PRE4YFR050C RNA1P11745 407 aaKnown RBP1.69□□□□□ -2.14
PRE4YFR050C DAL2P25335 343 aa1.69□□□□□ -2.14
PRE4YFR050C RVS161P25343 265 aaKnown RBP1.69□□□□□ -2.14
PRE4YFR050C TAH1P25638 111 aaPredicted RBP1.69□□□□□ -2.14
PRE4YFR050C ZIP1P31111 875 aa1.69□□□□□ -2.14
PRE4YFR050C NIP100P33420 868 aa1.69□□□□□ -2.14
PRE4YFR050C CLG1P35190 452 aa1.69□□□□□ -2.14
PRE4YFR050C MIX23P38162 196 aa1.69□□□□□ -2.14
PRE4YFR050C YHI9P38765 294 aa1.69□□□□□ -2.14
PRE4YFR050C MST28P39552 234 aa1.69□□□□□ -2.14
PRE4YFR050C PRM5P40476 318 aa1.69□□□□□ -2.14
PRE4YFR050C FIP1P45976 327 aa1.69□□□□□ -2.14
PRE4YFR050C TRS85P46944 698 aa1.69□□□□□ -2.14
PRE4YFR050C ECM27P47144 725 aa1.69□□□□□ -2.14
PRE4YFR050C YIF1P53845 314 aaKnown RBP1.69□□□□□ -2.14
PRE4YFR050C SDC1Q03323 175 aa1.69□□□□□ -2.14
PRE4YFR050C HSP31Q04432 237 aa1.69□□□□□ -2.14
PRE4YFR050C RQC1Q05468 723 aaKnown RBP1.69□□□□□ -2.14
PRE4YFR050C RLP24Q07915 199 aaKnown RBP1.69□□□□□ -2.14
PRE4YFR050C TIM18Q08749 192 aa1.69□□□□□ -2.14
PRE4YFR050C MED1Q12321 566 aa1.69□□□□□ -2.14
PRE4YFR050C LDB17Q12342 491 aa1.69□□□□□ -2.14
PRE4YFR050C MET17P06106 444 aa1.68□□□□□ -2.14
PRE4YFR050C GPH1P06738 902 aaKnown RBP1.68□□□□□ -2.14
PRE4YFR050C ALG1P16661 449 aa1.68□□□□□ -2.14
PRE4YFR050C TIP1P27654 210 aaPredicted RBP1.68□□□□□ -2.14
PRE4YFR050C MNS1P32906 549 aa1.68□□□□□ -2.14
PRE4YFR050C PRP18P33411 251 aaPredicted RBP1.68□□□□□ -2.14
PRE4YFR050C SKT5P34226 696 aa1.68□□□□□ -2.14
PRE4YFR050C SWD3P38123 315 aa1.68□□□□□ -2.14
PRE4YFR050C REE1P40893 198 aa1.68□□□□□ -2.14
PRE4YFR050C TFG2P41896 400 aaPredicted RBP1.68□□□□□ -2.14
PRE4YFR050C YGR250CP53316 781 aaKnown RBP1.68□□□□□ -2.14
PRE4YFR050C JJJ1P53863 590 aa1.68□□□□□ -2.14
PRE4YFR050C YPL107WQ02873 248 aa1.68□□□□□ -2.14
PRE4YFR050C YMR111CQ04461 462 aaPredicted RBP1.68□□□□□ -2.14
PRE4YFR050C ROY1Q04847 553 aa1.68□□□□□ -2.14
PRE4YFR050C VTA1Q06263 330 aa1.68□□□□□ -2.14
PRE4YFR050C MRPL35Q06678 367 aa1.68□□□□□ -2.14
PRE4YFR050C REX4Q08237 289 aa1.68□□□□□ -2.14
PRE4YFR050C YSF3P0C074 85 aaPredicted RBP1.67□□□□□ -2.14
PRE4YFR050C SLY1P22213 666 aa1.67□□□□□ -2.14
PRE4YFR050C PRP21P32524 280 aaPredicted RBP1.67□□□□□ -2.14
PRE4YFR050C HCS1P34243 683 aa1.67□□□□□ -2.14
PRE4YFR050C CSG2P35206 410 aa1.67□□□□□ -2.14
PRE4YFR050C CCT2P39076 527 aaKnown RBP1.67□□□□□ -2.14
PRE4YFR050C PRP39P39682 629 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms