RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C SED4P25365 1065 aa5.3□□□□□ -1.56
MDH3YDL078C GFD2P25370 566 aaKnown RBP5.3□□□□□ -1.56
MDH3YDL078C STP22P25604 385 aa5.3□□□□□ -1.56
MDH3YDL078C RAD14P28519 371 aa5.3□□□□□ -1.56
MDH3YDL078C FUN26P31381 517 aa5.3□□□□□ -1.56
MDH3YDL078C SAC1P32368 623 aaKnown RBP5.3□□□□□ -1.56
MDH3YDL078C HYM1P32464 399 aa5.3□□□□□ -1.56
MDH3YDL078C MSS1P32559 526 aaPredicted RBP5.3□□□□□ -1.56
MDH3YDL078C HBS1P32769 611 aaKnown RBP5.3□□□□□ -1.56
MDH3YDL078C MRPL16P38064 232 aa5.3□□□□□ -1.56
MDH3YDL078C TRR2P38816 342 aa5.3□□□□□ -1.56
MDH3YDL078C GIP2P40036 548 aa5.3□□□□□ -1.56
MDH3YDL078C CCC1P47818 322 aa5.3□□□□□ -1.56
MDH3YDL078C UBC12P52491 188 aa5.3□□□□□ -1.56
MDH3YDL078C IMO32P53219 342 aa5.3□□□□□ -1.56
MDH3YDL078C FMP48P53233 369 aa5.3□□□□□ -1.56
MDH3YDL078C HOL1P53389 586 aa5.3□□□□□ -1.56
MDH3YDL078C RSN1Q03516 953 aa5.3□□□□□ -1.56
MDH3YDL078C RTT103Q05543 409 aa5.3□□□□□ -1.56
MDH3YDL078C NGL1Q08213 363 aaKnown RBP5.3□□□□□ -1.56
MDH3YDL078C YOR365CQ08844 703 aa5.3□□□□□ -1.56
MDH3YDL078C YOR376WQ08900 122 aa5.3□□□□□ -1.56
MDH3YDL078C SNF8Q12483 233 aa5.3□□□□□ -1.56
MDH3YDL078C YKL018C-AQ3E7A7 99 aa5.3□□□□□ -1.56
MDH3YDL078C MEC1P38111 2368 aa5.3□□□□□ -1.56
MDH3YDL078C AI1P03875 834 aa5.29□□□□□ -1.56
MDH3YDL078C CCA1P21269 546 aa5.29□□□□□ -1.56
MDH3YDL078C PRE9P23638 258 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C VMA5P31412 392 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C MTC2P34246 357 aa5.29□□□□□ -1.56
MDH3YDL078C PDX3P38075 228 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C MOH1P38191 138 aa5.29□□□□□ -1.56
MDH3YDL078C PTC7P38797 343 aa5.29□□□□□ -1.56
MDH3YDL078C HRB1P38922 454 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
MDH3YDL078C SUR2P38992 349 aa5.29□□□□□ -1.56
MDH3YDL078C ECM10P39987 644 aa5.29□□□□□ -1.56
MDH3YDL078C RGI1P40043 161 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C PIG2P40187 538 aa5.29□□□□□ -1.56
MDH3YDL078C LYS12P40495 371 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C PMT4P46971 762 aa5.29□□□□□ -1.56
MDH3YDL078C YJL043WP47053 257 aa5.29□□□□□ -1.56
MDH3YDL078C RPS12P48589 143 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C TAF4P50105 388 aa5.29□□□□□ -1.56
MDH3YDL078C UBC9P50623 157 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C PMT5P52867 743 aa5.29□□□□□ -1.56
MDH3YDL078C CWC23P52868 283 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C SOK2P53438 785 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C HHO1P53551 258 aa5.29□□□□□ -1.56
MDH3YDL078C YNR068CP53754 272 aa5.29□□□□□ -1.56
MDH3YDL078C YMD8Q03697 442 aa5.29□□□□□ -1.56
MDH3YDL078C RUB1Q03919 77 aa5.29□□□□□ -1.56
MDH3YDL078C SPC19Q03954 165 aa5.29□□□□□ -1.56
MDH3YDL078C DPB4Q04603 196 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C SMA2Q04658 369 aa5.29□□□□□ -1.56
MDH3YDL078C YMR310CQ04867 317 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C YPS7Q06325 596 aa5.29□□□□□ -1.56
MDH3YDL078C CYK3Q07533 885 aa5.29□□□□□ -1.56
MDH3YDL078C YLR036CQ07986 203 aa5.29□□□□□ -1.56
MDH3YDL078C YOL131WQ08270 108 aa5.29□□□□□ -1.56
MDH3YDL078C YPR202WQ08993 238 aa5.29□□□□□ -1.56
MDH3YDL078C NSL1Q12143 216 aa5.29□□□□□ -1.56
MDH3YDL078C PAA1Q12447 191 aaKnown RBP5.29□□□□□ -1.56
MDH3YDL078C YPR1Q12458 312 aa5.29□□□□□ -1.56
MDH3YDL078C DCP1Q12517 231 aaPredicted RBP5.29□□□□□ -1.56
MDH3YDL078C YOR032W-AQ8TGS1 66 aa5.29□□□□□ -1.56
MDH3YDL078C GCN4P03069 281 aa5.28□□□□□ -1.56
MDH3YDL078C KIN28P06242 306 aa5.28□□□□□ -1.56
MDH3YDL078C TPK2P06245 380 aa5.28□□□□□ -1.56
MDH3YDL078C YSF3P0C074 85 aaPredicted RBP5.28□□□□□ -1.56
MDH3YDL078C GRX2P17695 143 aaKnown RBP5.28□□□□□ -1.56
MDH3YDL078C AAC3P18238 307 aa5.28□□□□□ -1.56
MDH3YDL078C ADH7P25377 361 aa5.28□□□□□ -1.56
MDH3YDL078C YCL049CP25577 312 aa5.28□□□□□ -1.56
MDH3YDL078C CSM1P25651 190 aa5.28□□□□□ -1.56
MDH3YDL078C SPC34P36131 295 aa5.28□□□□□ -1.56
MDH3YDL078C YJL068CP40363 299 aa5.28□□□□□ -1.56
MDH3YDL078C YIL067CP40514 678 aa5.28□□□□□ -1.56
MDH3YDL078C PKP1P40530 394 aa5.28□□□□□ -1.56
MDH3YDL078C IMA5P40884 581 aa5.28□□□□□ -1.56
MDH3YDL078C SNO3P43544 222 aa5.28□□□□□ -1.56
MDH3YDL078C MNN5P46982 586 aa5.28□□□□□ -1.56
MDH3YDL078C UBX6P47049 396 aa5.28□□□□□ -1.56
MDH3YDL078C PAC10P48363 199 aa5.28□□□□□ -1.56
MDH3YDL078C CDH1P53197 566 aa5.28□□□□□ -1.56
MDH3YDL078C YNR062CP53748 327 aa5.28□□□□□ -1.56
MDH3YDL078C COG5P53951 403 aa5.28□□□□□ -1.56
MDH3YDL078C SKI8Q02793 397 aaPredicted RBP5.28□□□□□ -1.56
MDH3YDL078C DIA2Q08496 732 aaPredicted RBP5.28□□□□□ -1.56
MDH3YDL078C YOR342CQ12182 319 aa5.28□□□□□ -1.56
MDH3YDL078C FYV7Q12247 151 aa5.28□□□□□ -1.56
MDH3YDL078C SKS1Q12505 502 aa5.28□□□□□ -1.56
MDH3YDL078C ATP2P00830 511 aaKnown RBP5.27□□□□□ -1.57
MDH3YDL078C GPH1P06738 902 aaKnown RBP5.27□□□□□ -1.57
MDH3YDL078C RPL20AP0CX23 172 aaKnown RBP5.27□□□□□ -1.57
MDH3YDL078C RPL20BP0CX24 172 aaPredicted RBP5.27□□□□□ -1.57
MDH3YDL078C CAP2P13517 287 aa5.27□□□□□ -1.57
MDH3YDL078C GPI12P23797 304 aa5.27□□□□□ -1.57
MDH3YDL078C PTP2P29461 750 aa5.27□□□□□ -1.57
MDH3YDL078C THI4P32318 326 aa5.27□□□□□ -1.57
MDH3YDL078C MRPL3P36516 390 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms