RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W PRP39P39682 629 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W COG3P40094 801 aa3.96□□□□□ -1.78
SEN1YLR430W TAD2P47058 250 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-JR2P47099 440 aa3.96□□□□□ -1.78
SEN1YLR430W SDT1P53078 280 aa3.96□□□□□ -1.78
SEN1YLR430W GRX5Q02784 150 aa3.96□□□□□ -1.78
SEN1YLR430W SKY1Q03656 742 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-DR1Q03856 440 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-ML1Q04706 440 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W SNA4Q07549 140 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-BRQ12217 440 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-NL2Q12470 440 aa3.96□□□□□ -1.78
SEN1YLR430W TY1A-GR2Q12485 440 aa3.96□□□□□ -1.78
SEN1YLR430W RPS9AO13516 197 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W SUC2P00724 532 aa3.96□□□□□ -1.78
SEN1YLR430W SRD1P09007 221 aa3.96□□□□□ -1.78
SEN1YLR430W ERD2P18414 219 aa3.96□□□□□ -1.78
SEN1YLR430W PUP1P25043 261 aa3.96□□□□□ -1.78
SEN1YLR430W MRP20P32387 263 aa3.96□□□□□ -1.78
SEN1YLR430W BCS1P32839 456 aa3.96□□□□□ -1.78
SEN1YLR430W MRPL28P36527 147 aa3.96□□□□□ -1.78
SEN1YLR430W VPS52P39904 641 aa3.96□□□□□ -1.78
SEN1YLR430W SKP2P42843 763 aa3.96□□□□□ -1.78
SEN1YLR430W YJR154WP47181 346 aa3.96□□□□□ -1.78
SEN1YLR430W TIM13P53299 105 aa3.96□□□□□ -1.78
SEN1YLR430W ATG39Q06159 398 aa3.96□□□□□ -1.78
SEN1YLR430W ANT1Q06497 328 aa3.96□□□□□ -1.78
SEN1YLR430W MFG1Q07684 458 aa3.96□□□□□ -1.78
SEN1YLR430W REX4Q08237 289 aa3.96□□□□□ -1.78
SEN1YLR430W SRL2Q12020 392 aa3.96□□□□□ -1.78
SEN1YLR430W YEL009C-AA0A023PZF2 135 aa3.96□□□□□ -1.78
SEN1YLR430W CAN1P04817 590 aa3.96□□□□□ -1.78
SEN1YLR430W RPS4AP0CX35 261 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W RPS4BP0CX36 261 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W SAM35P14693 329 aa3.96□□□□□ -1.78
SEN1YLR430W TSA1P34760 196 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W FUI1P38196 639 aa3.96□□□□□ -1.78
SEN1YLR430W LRP1P38801 184 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W SOL1P50278 321 aa3.96□□□□□ -1.78
SEN1YLR430W OYE2Q03558 400 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W YLR179CQ06252 201 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W HRD1Q08109 551 aa3.96□□□□□ -1.78
SEN1YLR430W GPM2Q12008 311 aa3.96□□□□□ -1.78
SEN1YLR430W SRO7Q12038 1033 aa3.96□□□□□ -1.78
SEN1YLR430W WTM1Q12363 437 aaKnown RBP3.96□□□□□ -1.78
SEN1YLR430W RRI1Q12468 440 aa3.96□□□□□ -1.78
SEN1YLR430W TY1B-BRQ12193 1756 aa3.96□□□□□ -1.78
SEN1YLR430W TY1B-GR3Q12316 1755 aa3.96□□□□□ -1.78
SEN1YLR430W TY1B-ORQ92393 1755 aa3.96□□□□□ -1.78
SEN1YLR430W THI12P42883 340 aa3.96□□□□□ -1.78
SEN1YLR430W THI5P43534 340 aa3.96□□□□□ -1.78
SEN1YLR430W DAN1P47178 298 aa3.96□□□□□ -1.78
SEN1YLR430W ECM7Q06200 448 aa3.96□□□□□ -1.78
SEN1YLR430W CTS2Q06350 511 aa3.96□□□□□ -1.78
SEN1YLR430W YLL056CQ12177 298 aa3.96□□□□□ -1.78
SEN1YLR430W CDC34P14682 295 aa3.95□□□□□ -1.78
SEN1YLR430W SPO7P18410 259 aa3.95□□□□□ -1.78
SEN1YLR430W HOP1P20050 605 aa3.95□□□□□ -1.78
SEN1YLR430W PRM8P53174 237 aa3.95□□□□□ -1.78
SEN1YLR430W YGR012WP53206 393 aa3.95□□□□□ -1.78
SEN1YLR430W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SEN1YLR430W SCD5P34758 872 aa3.95□□□□□ -1.78
SEN1YLR430W MRPL11P36521 249 aaPredicted RBP3.95□□□□□ -1.78
SEN1YLR430W DTR1P38125 572 aa3.95□□□□□ -1.78
SEN1YLR430W ZAP1P47043 880 aa3.95□□□□□ -1.78
SEN1YLR430W FAA4P47912 694 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W SHY1P53266 389 aa3.95□□□□□ -1.78
SEN1YLR430W GPI15P53961 229 aa3.95□□□□□ -1.78
SEN1YLR430W YLR446WQ06204 433 aa3.95□□□□□ -1.78
SEN1YLR430W LSB5P25369 354 aa3.95□□□□□ -1.78
SEN1YLR430W ADE1P27616 306 aa3.95□□□□□ -1.78
SEN1YLR430W NGR1P32831 672 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W ALY1P36117 915 aa3.95□□□□□ -1.78
SEN1YLR430W CUE1P38428 203 aa3.95□□□□□ -1.78
SEN1YLR430W MGE1P38523 228 aa3.95□□□□□ -1.78
SEN1YLR430W BIT61P47041 543 aa3.95□□□□□ -1.78
SEN1YLR430W COS10P52924 374 aa3.95□□□□□ -1.78
SEN1YLR430W YNR066CP53752 436 aa3.95□□□□□ -1.78
SEN1YLR430W YOR059CQ08448 450 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W TY1A-HP0C2I4 478 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W MET22P32179 357 aa3.95□□□□□ -1.78
SEN1YLR430W PHO11P35842 467 aa3.95□□□□□ -1.78
SEN1YLR430W SHE2P36068 246 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SEN1YLR430W AHP1P38013 176 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W PHO12P38693 467 aa3.95□□□□□ -1.78
SEN1YLR430W YGR127WP53275 312 aa3.95□□□□□ -1.78
SEN1YLR430W SNO1Q03144 224 aa3.95□□□□□ -1.78
SEN1YLR430W GMC1Q04399 608 aa3.95□□□□□ -1.78
SEN1YLR430W YLR346CQ06139 101 aa3.95□□□□□ -1.78
SEN1YLR430W AHA1Q12449 350 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W CBP1P07252 654 aa3.95□□□□□ -1.78
SEN1YLR430W RPP1BP10622 106 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W YCL068CP25593 260 aa3.95□□□□□ -1.78
SEN1YLR430W YBR220CP38318 560 aa3.95□□□□□ -1.78
SEN1YLR430W YFL052WP43551 465 aa3.95□□□□□ -1.78
SEN1YLR430W YJR111CP47148 283 aaKnown RBP3.95□□□□□ -1.78
SEN1YLR430W YJR149WP47177 404 aa3.95□□□□□ -1.78
SEN1YLR430W TPO4Q12256 659 aa3.95□□□□□ -1.78
SEN1YLR430W YNR034W-AQ3E841 98 aa3.95□□□□□ -1.78
SEN1YLR430W YOR304C-AO14468 76 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms