RNA–Protein interactions for RNA: RDN5-3

RDN5-3, Transcript of Variant 5S ribosomal RNA (5S rRNA) gene, yeastyeast

Gene RDN5-3, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-3RDN5-3 CDC23P16522 626 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 YCR100CP25606 316 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 CDC12P32468 407 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 MSS1P32559 526 aaPredicted RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 PAU2P32612 120 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 SUI1P32911 108 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 LST4P34239 828 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 LEU5P38702 357 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 HTD2P38790 280 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 PTI1P39927 425 aaPredicted RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 PMT6P42934 759 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 LSM1P47017 172 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 YGL235WP53071 178 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 POP6P53218 158 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 RHO3Q00245 231 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 RPL6AQ02326 176 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 YPL113CQ02961 396 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 CTL1Q03220 320 aaKnown RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 DLT1Q04216 342 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 SNT309Q06091 175 aaPredicted RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 OPI10Q08202 246 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 PFA4Q12006 378 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 TIR4Q12218 487 aaPredicted RBP6.22□□□□□ -1.41
RDN5-3RDN5-3 TAO3P40468 2376 aa6.22□□□□□ -1.41
RDN5-3RDN5-3 CDC9P04819 755 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 ARG80P07249 177 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 AAC3P18238 307 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 UTR1P21373 530 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 MGR1P25573 417 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 MTH1P35198 433 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 HRB1P38922 454 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
RDN5-3RDN5-3 YIL166CP40445 542 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 AIM25P47140 327 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 PPT1P53043 513 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 DOC1P53068 250 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 MTL1P53214 551 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 RNH70P53331 553 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 YHM2Q04013 314 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 HLR1Q04429 423 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 CDA2Q06703 312 aa6.21□□□□□ -1.42
RDN5-3RDN5-3 HIP1P06775 603 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 HAP4P14064 554 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 PDA1P16387 420 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 PUP1P25043 261 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 RNA14P25298 677 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 CPR3P25719 182 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 CAM1P29547 415 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 ACB1P31787 87 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 WBP1P33767 430 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 YKL077WP36081 392 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 PTH1P38876 190 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 RFC4P40339 323 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 SDP1P40479 209 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 TED1P40533 473 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 BAP3P41815 604 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 TOS2P50078 622 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 YGR266WP53326 701 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 CWC25P53854 179 aaKnown RBP6.2□□□□□ -1.42
RDN5-3RDN5-3 YDR541CQ03049 344 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 PEX30Q06169 523 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 FEX2Q08991 375 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 BTS1Q12051 335 aa6.2□□□□□ -1.42
RDN5-3RDN5-3 CET1O13297 549 aaPredicted RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 YBR085C-AO43137 85 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 GAL7P08431 366 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 PUT3P25502 979 aaPredicted RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 YCL002CP25565 263 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 FUN19P28003 413 aaPredicted RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 PRE4P30657 266 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 ATS1P31386 333 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YMC1P32331 307 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 SRB5P32585 307 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YEF1P32622 495 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 RRP3P38712 501 aaKnown RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 GEP4P38812 185 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YHR122WP38829 231 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YMR144WP40214 342 aaKnown RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 POP1P41812 875 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 LOH1P47055 219 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 COQ5P49017 307 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 DML1Q03652 475 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YMR252CQ04814 134 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 DCR2Q05924 578 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 KEI1Q06346 221 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YPR127WQ06494 345 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 LUC7Q07508 261 aaPredicted RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 SYC1Q08553 188 aaPredicted RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 SRO7Q12038 1033 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 AEP3Q12089 606 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 ATP16Q12165 160 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 LEU9Q12166 604 aaKnown RBP6.19□□□□□ -1.42
RDN5-3RDN5-3 YOL107WQ12239 342 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 YDL177CQ12257 170 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 INP53Q12271 1107 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 FSH3Q99369 266 aa6.19□□□□□ -1.42
RDN5-3RDN5-3 RPL3P14126 387 aaKnown RBP6.18□□□□□ -1.42
RDN5-3RDN5-3 RED1P14291 827 aa6.18□□□□□ -1.42
RDN5-3RDN5-3 CKS1P20486 150 aaKnown RBP6.18□□□□□ -1.42
RDN5-3RDN5-3 AGP1P25376 633 aa6.18□□□□□ -1.42
RDN5-3RDN5-3 VMA8P32610 256 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms