RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
ATG2	YNL242W	BDP1	P46678	594 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	ECM16	Q04217	1267 aa	Known RBP	4.62	□□□□□ -1.67
ATG2	YNL242W	ITT1	Q04638	464 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	HSP82	P02829	709 aa	Known RBP	4.61	□□□□□ -1.67
ATG2	YNL242W	MRPL10	P36520	322 aa		4.61	□□□□□ -1.67
ATG2	YNL242W	ATG13	Q06628	738 aa		4.61	□□□□□ -1.67
ATG2	YNL242W	RAV1	P47104	1357 aa		4.61	□□□□□ -1.67
ATG2	YNL242W	RMD1	Q03441	430 aa		4.61	□□□□□ -1.67
ATG2	YNL242W	ECM1	P39715	212 aa		4.61	□□□□□ -1.67
ATG2	YNL242W	NOP14	Q99207	810 aa	Known RBP	4.61	□□□□□ -1.67
ATG2	YNL242W	ESC1	Q03661	1658 aa	Known RBP	4.61	□□□□□ -1.67
ATG2	YNL242W	CIR1	P42940	261 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	CWH41	P53008	833 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	HXT17	P53631	564 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	SGD1	Q06132	899 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	STU2	P46675	888 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	PIL1	P53252	339 aa	Known RBP	4.6	□□□□□ -1.67
ATG2	YNL242W	AIM7	Q12156	149 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	MSB4	Q12317	492 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.6	□□□□□ -1.67
ATG2	YNL242W	RNR2	P09938	399 aa	Known RBP	4.6	□□□□□ -1.67
ATG2	YNL242W	CIN4	P39110	191 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	ILV3	P39522	585 aa	Known RBP	4.6	□□□□□ -1.67
ATG2	YNL242W	HST1	P53685	503 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	SSL2	Q00578	843 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	GCR2	Q01722	534 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	CAB1	Q04430	367 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	TLG2	Q08144	397 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	PSE1	P32337	1089 aa	Known RBP	4.6	□□□□□ -1.67
ATG2	YNL242W	MED8	P38304	223 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	HIM1	Q06674	414 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	TRS33	Q99394	268 aa		4.6	□□□□□ -1.67
ATG2	YNL242W	PRP45	P28004	379 aa	Predicted RBP	4.59	□□□□□ -1.67
ATG2	YNL242W	TIF4632	P39936	914 aa	Known RBP	4.59	□□□□□ -1.67
ATG2	YNL242W	MEC3	Q02574	474 aa		4.59	□□□□□ -1.67
ATG2	YNL242W	CTI6	Q08923	506 aa		4.59	□□□□□ -1.67
ATG2	YNL242W	KRE5	P22023	1365 aa		4.59	□□□□□ -1.67
ATG2	YNL242W	TY1B-DR3	Q99231	1755 aa		4.59	□□□□□ -1.67
ATG2	YNL242W	GIN4	Q12263	1142 aa		4.59	□□□□□ -1.68
ATG2	YNL242W	BDH2	P39713	417 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	SAP1	P39955	897 aa	Known RBP	4.58	□□□□□ -1.68
ATG2	YNL242W	SRC1	Q03707	834 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	BMS1	Q08965	1183 aa	Known RBP	4.58	□□□□□ -1.68
ATG2	YNL242W	KEX1	P09620	729 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	SIC1	P38634	284 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
ATG2	YNL242W	MAK10	Q02197	733 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	YBT1	P32386	1661 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	HEF3	P53978	1044 aa	Known RBP	4.58	□□□□□ -1.68
ATG2	YNL242W	HRQ1	Q05549	1077 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	ISW2	Q08773	1120 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-LR1	P0C2J3	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-F	P0CX63	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-GR2	P0CX64	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-C	P25384	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-DR2	Q03494	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY1B-DR1	Q03855	1755 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-OR1	Q12113	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-DR1	Q12472	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	TY2B-OR2	Q12501	1770 aa		4.58	□□□□□ -1.68
ATG2	YNL242W	PEX14	P53112	341 aa		4.57	□□□□□ -1.68
ATG2	YNL242W	GAS4	Q08271	471 aa		4.57	□□□□□ -1.68
ATG2	YNL242W	CEP3	P40969	608 aa		4.57	□□□□□ -1.68
ATG2	YNL242W	NOC2	P39744	710 aa	Known RBP	4.57	□□□□□ -1.68
ATG2	YNL242W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ATG2	YNL242W	PET123	P17558	318 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	PBY1	P38254	753 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	RTT107	P38850	1070 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	VPS41	P38959	992 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	CSI1	Q04368	295 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	IRC3	Q06683	689 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	PEX19	Q07418	342 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	YSP2	Q06681	1438 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	PSK1	P31374	1356 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	PDI1	P17967	522 aa	Known RBP	4.56	□□□□□ -1.68
ATG2	YNL242W	SWH1	P35845	1188 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	YMR102C	Q03177	834 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	TOP1	P04786	769 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	DPB3	P27344	201 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	MGA2	P40578	1113 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	UBP10	P53874	792 aa	Predicted RBP	4.56	□□□□□ -1.68
ATG2	YNL242W	MDM38	Q08179	573 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	RAD9	P14737	1309 aa		4.56	□□□□□ -1.68
ATG2	YNL242W	RRP43	P25359	394 aa	Predicted RBP	4.56	□□□□□ -1.68
ATG2	YNL242W	CCT5	P40413	562 aa	Known RBP	4.56	□□□□□ -1.68
ATG2	YNL242W	PDR11	P40550	1411 aa		4.55	□□□□□ -1.68
ATG2	YNL242W	YKL068W-A	Q3E826	78 aa		4.55	□□□□□ -1.68
ATG2	YNL242W	RPL19A	P0CX82	189 aa	Known RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	RPL19B	P0CX83	189 aa	Predicted RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	ALD4	P46367	519 aa	Known RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	RCM1	P53972	490 aa		4.55	□□□□□ -1.68
ATG2	YNL242W	RRB1	Q04225	511 aa	Known RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	RBA50	Q04418	439 aa		4.55	□□□□□ -1.68
ATG2	YNL242W	TSR3	Q12094	313 aa	Known RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	TY2B-B	Q12491	1770 aa		4.55	□□□□□ -1.68
ATG2	YNL242W	ROM2	P51862	1356 aa	Known RBP	4.55	□□□□□ -1.68
ATG2	YNL242W	PUS1	Q12211	544 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms