RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W AFT1P22149 690 aa8.63□□□□□ -1.03
SPC42YKL042W CPS1P27614 576 aa8.63□□□□□ -1.03
SPC42YKL042W SPT5P27692 1063 aaKnown RBP8.62□□□□□ -1.03
SPC42YKL042W HST3P53687 447 aa8.62□□□□□ -1.03
SPC42YKL042W YDR444WQ04093 687 aa8.62□□□□□ -1.03
SPC42YKL042W TTI1P36097 1038 aa8.61□□□□□ -1.03
SPC42YKL042W SUP45P12385 437 aaKnown RBP8.6□□□□□ -1.03
SPC42YKL042W RSC30P38781 883 aa8.6□□□□□ -1.03
SPC42YKL042W YML020WQ03722 664 aa8.6□□□□□ -1.03
SPC42YKL042W MAK16P10962 306 aaPredicted RBP8.59□□□□□ -1.03
SPC42YKL042W KXD1P53158 218 aa8.59□□□□□ -1.03
SPC42YKL042W SLX8P40072 274 aa8.58□□□□□ -1.04
SPC42YKL042W YDJ1P25491 409 aaKnown RBP8.57□□□□□ -1.04
SPC42YKL042W ENO2P00925 437 aaKnown RBP8.56□□□□□ -1.04
SPC42YKL042W TRM1P15565 570 aaKnown RBP8.56□□□□□ -1.04
SPC42YKL042W TPD3P31383 635 aa8.56□□□□□ -1.04
SPC42YKL042W HXT10P43581 546 aa8.56□□□□□ -1.04
SPC42YKL042W LCB5Q06147 687 aaKnown RBP8.55□□□□□ -1.04
SPC42YKL042W ENO1P00924 437 aaKnown RBP8.54□□□□□ -1.04
SPC42YKL042W SIS2P36024 562 aa8.54□□□□□ -1.04
SPC42YKL042W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
SPC42YKL042W YJR115WP47152 169 aa8.54□□□□□ -1.04
SPC42YKL042W RPL34AP87262 121 aaPredicted RBP8.54□□□□□ -1.04
SPC42YKL042W PUS6P53294 404 aa8.53□□□□□ -1.04
SPC42YKL042W PDC1P06169 563 aaKnown RBP8.52□□□□□ -1.05
SPC42YKL042W RRD1P40454 393 aaKnown RBP8.52□□□□□ -1.05
SPC42YKL042W RIM21P48565 533 aa8.52□□□□□ -1.05
SPC42YKL042W TBF1Q02457 562 aa8.52□□□□□ -1.05
SPC42YKL042W NOP8Q08287 484 aaPredicted RBP8.52□□□□□ -1.05
SPC42YKL042W NOB1Q08444 459 aaKnown RBP8.52□□□□□ -1.05
SPC42YKL042W MRX10Q05648 414 aa8.51□□□□□ -1.05
SPC42YKL042W NAF1P53919 492 aaKnown RBP8.5□□□□□ -1.05
SPC42YKL042W SYH1Q02875 849 aaKnown RBP8.5□□□□□ -1.05
SPC42YKL042W YDL176WQ12027 708 aa8.5□□□□□ -1.05
SPC42YKL042W YPP1P46951 817 aa8.49□□□□□ -1.05
SPC42YKL042W PUP1P25043 261 aa8.46□□□□□ -1.06
SPC42YKL042W MSB3P48566 633 aaPredicted RBP8.45□□□□□ -1.06
SPC42YKL042W YML083CQ04526 418 aa8.45□□□□□ -1.06
SPC42YKL042W MCM16Q12262 181 aa8.45□□□□□ -1.06
SPC42YKL042W CDC3P32457 520 aaKnown RBP8.44□□□□□ -1.06
SPC42YKL042W RPA14P50106 137 aa8.44□□□□□ -1.06
SPC42YKL042W YDL206WQ12424 762 aa8.44□□□□□ -1.06
SPC42YKL042W TGL4P36165 910 aa8.43□□□□□ -1.06
SPC42YKL042W YPR097WQ06839 1073 aa8.43□□□□□ -1.06
SPC42YKL042W ALR1Q08269 859 aa8.43□□□□□ -1.06
SPC42YKL042W UGA3P26370 528 aa8.41□□□□□ -1.06
SPC42YKL042W KIP2P28743 706 aa8.41□□□□□ -1.06
SPC42YKL042W RDS2P19541 446 aaKnown RBP8.39□□□□□ -1.07
SPC42YKL042W PEP12P32854 288 aa8.39□□□□□ -1.07
SPC42YKL042W ISF1P32488 338 aa8.38□□□□□ -1.07
SPC42YKL042W SLD2P34252 453 aa8.38□□□□□ -1.07
SPC42YKL042W EMP47P43555 445 aa8.38□□□□□ -1.07
SPC42YKL042W IXR1P33417 597 aa8.37□□□□□ -1.07
SPC42YKL042W KTR7P40504 517 aa8.37□□□□□ -1.07
SPC42YKL042W PTK2P47116 818 aaKnown RBP8.37□□□□□ -1.07
SPC42YKL042W ECM23Q02710 187 aa8.36□□□□□ -1.07
SPC42YKL042W TEC1P18412 486 aa8.35□□□□□ -1.07
SPC42YKL042W OPT2Q06593 877 aa8.35□□□□□ -1.07
SPC42YKL042W SRF1Q12516 437 aa8.35□□□□□ -1.07
SPC42YKL042W MRT4P33201 236 aaKnown RBP8.34□□□□□ -1.07
SPC42YKL042W SSF1P38789 453 aaPredicted RBP8.34□□□□□ -1.07
SPC42YKL042W ACO2P39533 789 aa8.34□□□□□ -1.07
SPC42YKL042W CAF120P53836 1060 aa8.33□□□□□ -1.08
SPC42YKL042W STE20Q03497 939 aaKnown RBP8.33□□□□□ -1.08
SPC42YKL042W GUT2P32191 649 aa8.32□□□□□ -1.08
SPC42YKL042W ATG3P40344 310 aa8.32□□□□□ -1.08
SPC42YKL042W FIG4P42837 879 aa8.32□□□□□ -1.08
SPC42YKL042W MRX12P47084 519 aa8.32□□□□□ -1.08
SPC42YKL042W YLR346CQ06139 101 aa8.32□□□□□ -1.08
SPC42YKL042W FRA1Q07825 749 aa8.32□□□□□ -1.08
SPC42YKL042W HAT1Q12341 374 aa8.32□□□□□ -1.08
SPC42YKL042W GAL2P13181 574 aa8.31□□□□□ -1.08
SPC42YKL042W UBX7P38349 436 aa8.29□□□□□ -1.08
SPC42YKL042W NUP85P46673 744 aa8.29□□□□□ -1.08
SPC42YKL042W YPR084WQ06821 456 aa8.28□□□□□ -1.08
SPC42YKL042W VAC17P25591 423 aa8.25□□□□□ -1.09
SPC42YKL042W GLY1P37303 387 aaKnown RBP8.25□□□□□ -1.09
SPC42YKL042W SOH1P38633 127 aa8.25□□□□□ -1.09
SPC42YKL042W RTT106P40161 455 aa8.25□□□□□ -1.09
SPC42YKL042W UTP13Q05946 817 aaKnown RBP8.25□□□□□ -1.09
SPC42YKL042W PHO87P25360 923 aa8.24□□□□□ -1.09
SPC42YKL042W APL6P46682 809 aa8.23□□□□□ -1.09
SPC42YKL042W SEN54Q02825 467 aaPredicted RBP8.23□□□□□ -1.09
SPC42YKL042W HAP4P14064 554 aa8.22□□□□□ -1.09
SPC42YKL042W MIP1P15801 1254 aa8.21□□□□□ -1.1
SPC42YKL042W SCW11P53189 542 aa8.21□□□□□ -1.1
SPC42YKL042W YIR007WP40566 764 aa8.2□□□□□ -1.1
SPC42YKL042W TY1A-BLQ12266 440 aa8.2□□□□□ -1.1
SPC42YKL042W HEM3P28789 327 aa8.19□□□□□ -1.1
SPC42YKL042W YBL086CP38177 466 aa8.19□□□□□ -1.1
SPC42YKL042W ACS2P52910 683 aaKnown RBP8.19□□□□□ -1.1
SPC42YKL042W PUF6Q04373 656 aaKnown RBP8.19□□□□□ -1.1
SPC42YKL042W ITT1Q04638 464 aa8.19□□□□□ -1.1
SPC42YKL042W YBL113CQ7M4S9 792 aa8.19□□□□□ -1.1
SPC42YKL042W ARG82P07250 355 aa8.18□□□□□ -1.1
SPC42YKL042W STM1P39015 273 aaKnown RBP8.18□□□□□ -1.1
SPC42YKL042W KAR5Q04746 504 aa8.18□□□□□ -1.1
SPC42YKL042W TRK2P28584 889 aa8.17□□□□□ -1.1
SPC42YKL042W TPS3P38426 1054 aaKnown RBP8.17□□□□□ -1.1
SPC42YKL042W AAD14P42884 376 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms