RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	NPL4	P33755	580 aa		5.15	□□□□□ -1.58
SHQ1	YIL104C	STR2	P47164	639 aa		5.15	□□□□□ -1.58
SHQ1	YIL104C	YDR090C	Q03193	310 aa		5.15	□□□□□ -1.58
SHQ1	YIL104C	NUP170	P38181	1502 aa		5.14	□□□□□ -1.59
SHQ1	YIL104C	MLP2	P40457	1679 aa		5.14	□□□□□ -1.59
SHQ1	YIL104C	GAP1	P19145	602 aa	Predicted RBP	5.14	□□□□□ -1.59
SHQ1	YIL104C	ISM1	P48526	1002 aa		5.14	□□□□□ -1.59
SHQ1	YIL104C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SHQ1	YIL104C	NUD1	P32336	851 aa		5.13	□□□□□ -1.59
SHQ1	YIL104C	CAT8	P39113	1433 aa		5.13	□□□□□ -1.59
SHQ1	YIL104C	TUM1	Q08686	304 aa	Known RBP	5.13	□□□□□ -1.59
SHQ1	YIL104C	GAR1	P28007	205 aa	Known RBP	5.12	□□□□□ -1.59
SHQ1	YIL104C	CKB1	P43639	278 aa		5.12	□□□□□ -1.59
SHQ1	YIL104C	BUD3	P25558	1636 aa		5.11	□□□□□ -1.59
SHQ1	YIL104C	ARO1	P08566	1588 aa	Known RBP	5.11	□□□□□ -1.59
SHQ1	YIL104C	SPT16	P32558	1035 aa	Known RBP	5.11	□□□□□ -1.59
SHQ1	YIL104C	AIR1	P40507	360 aa	Known RBP	5.11	□□□□□ -1.59
SHQ1	YIL104C	CST6	P40535	587 aa		5.11	□□□□□ -1.59
SHQ1	YIL104C	GCD11	P32481	527 aa	Known RBP	5.09	□□□□□ -1.59
SHQ1	YIL104C	REF2	P42073	533 aa	Predicted RBP	5.09	□□□□□ -1.59
SHQ1	YIL104C	LAM6	Q08001	693 aa		5.08	□□□□□ -1.6
SHQ1	YIL104C	SSM4	P40318	1319 aa		5.08	□□□□□ -1.6
SHQ1	YIL104C	CDC4	P07834	779 aa		5.07	□□□□□ -1.6
SHQ1	YIL104C	CLA4	P48562	842 aa		5.07	□□□□□ -1.6
SHQ1	YIL104C	YBT1	P32386	1661 aa		5.07	□□□□□ -1.6
SHQ1	YIL104C	PAT1	P25644	796 aa	Known RBP	5.07	□□□□□ -1.6
SHQ1	YIL104C	TRM3	Q07527	1436 aa		5.06	□□□□□ -1.6
SHQ1	YIL104C	BNR1	P40450	1375 aa		5.06	□□□□□ -1.6
SHQ1	YIL104C	IKI3	Q06706	1349 aa	Known RBP	5.06	□□□□□ -1.6
SHQ1	YIL104C	ORC6	P38826	435 aa		5.06	□□□□□ -1.6
SHQ1	YIL104C	FRK1	Q03002	865 aa	Predicted RBP	5.06	□□□□□ -1.6
SHQ1	YIL104C	DNF2	Q12675	1612 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-DR4	O74302	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-H	P0C2I4	478 aa	Known RBP	5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-A	P0CX57	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-PR1	P0CX58	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-OR	P0CX59	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-PR2	P0CX60	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-DR5	P0CX65	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-ER2	P0CX66	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-GR3	P0CX67	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-LR1	P0CX68	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-MR2	P0CX69	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-JR2	P47099	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-DR1	Q03856	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-ML1	Q04706	440 aa	Known RBP	5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-BR	Q12217	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-NL2	Q12470	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	TY1A-GR2	Q12485	440 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	DOP1	Q03921	1698 aa		5.05	□□□□□ -1.6
SHQ1	YIL104C	SRB8	P25648	1427 aa		5.04	□□□□□ -1.6
SHQ1	YIL104C	SEC2	P17065	759 aa		5.04	□□□□□ -1.6
SHQ1	YIL104C	RRN7	P40992	514 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	YPR148C	Q06523	435 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	MAK21	Q12176	1025 aa	Known RBP	5.02	□□□□□ -1.61
SHQ1	YIL104C	MET22	P32179	357 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	YAP3	P38749	330 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	MVP1	P40959	511 aa	Known RBP	5.02	□□□□□ -1.61
SHQ1	YIL104C	BDP1	P46678	594 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	HED1	Q03937	162 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	ENV9	Q08651	330 aa		5.02	□□□□□ -1.61
SHQ1	YIL104C	SEC7	P11075	2009 aa	Known RBP	5.01	□□□□□ -1.61
SHQ1	YIL104C	BUD21	Q08492	214 aa	Predicted RBP	5.01	□□□□□ -1.61
SHQ1	YIL104C	COX6	P00427	148 aa		5	□□□□□ -1.61
SHQ1	YIL104C	TYS1	P36421	394 aa	Known RBP	5	□□□□□ -1.61
SHQ1	YIL104C	YPR109W	Q06104	294 aa		5	□□□□□ -1.61
SHQ1	YIL104C	YOR093C	Q12275	1648 aa		4.98	□□□□□ -1.61
SHQ1	YIL104C	IPL1	P38991	367 aa		4.97	□□□□□ -1.61
SHQ1	YIL104C	PDR11	P40550	1411 aa		4.97	□□□□□ -1.61
SHQ1	YIL104C	YDR444W	Q04093	687 aa		4.97	□□□□□ -1.61
SHQ1	YIL104C	RGR1	P19263	1082 aa		4.97	□□□□□ -1.61
SHQ1	YIL104C	CHC1	P22137	1653 aa	Known RBP	4.96	□□□□□ -1.62
SHQ1	YIL104C	VPS70	P47161	811 aa		4.95	□□□□□ -1.62
SHQ1	YIL104C	MAK10	Q02197	733 aa		4.95	□□□□□ -1.62
SHQ1	YIL104C	HST3	P53687	447 aa		4.94	□□□□□ -1.62
SHQ1	YIL104C	KEX2	P13134	814 aa		4.93	□□□□□ -1.62
SHQ1	YIL104C	ASH1	P34233	588 aa		4.93	□□□□□ -1.62
SHQ1	YIL104C	PDR5	P33302	1511 aa	Known RBP	4.93	□□□□□ -1.62
SHQ1	YIL104C	VMR1	P38735	1592 aa		4.93	□□□□□ -1.62
SHQ1	YIL104C	AFT1	P22149	690 aa		4.92	□□□□□ -1.62
SHQ1	YIL104C	LCB5	Q06147	687 aa	Known RBP	4.92	□□□□□ -1.62
SHQ1	YIL104C	URN1	Q06525	465 aa	Known RBP	4.92	□□□□□ -1.62
SHQ1	YIL104C	ERF2	Q06551	359 aa		4.91	□□□□□ -1.62
SHQ1	YIL104C	MET32	Q12041	191 aa		4.91	□□□□□ -1.62
SHQ1	YIL104C	MOD5	P07884	428 aa		4.9	□□□□□ -1.63
SHQ1	YIL104C	DNF3	Q12674	1656 aa		4.89	□□□□□ -1.63
SHQ1	YIL104C	PAC1	P39946	494 aa	Known RBP	4.89	□□□□□ -1.63
SHQ1	YIL104C	CLB5	P30283	435 aa		4.88	□□□□□ -1.63
SHQ1	YIL104C	NUP188	P52593	1655 aa	Known RBP	4.87	□□□□□ -1.63
SHQ1	YIL104C	PSE1	P32337	1089 aa	Known RBP	4.87	□□□□□ -1.63
SHQ1	YIL104C	YDL176W	Q12027	708 aa		4.87	□□□□□ -1.63
SHQ1	YIL104C	RRD1	P40454	393 aa	Known RBP	4.87	□□□□□ -1.63
SHQ1	YIL104C	PUS5	Q06244	254 aa		4.87	□□□□□ -1.63
SHQ1	YIL104C	IML1	P47170	1584 aa		4.86	□□□□□ -1.63
SHQ1	YIL104C	RTF1	P53064	558 aa		4.86	□□□□□ -1.63
SHQ1	YIL104C	TUB4	P53378	473 aa		4.86	□□□□□ -1.63
SHQ1	YIL104C	AGE1	Q04412	482 aa		4.85	□□□□□ -1.63
SHQ1	YIL104C	YJR115W	P47152	169 aa		4.84	□□□□□ -1.63
SHQ1	YIL104C	RAV1	P47104	1357 aa		4.84	□□□□□ -1.64
SHQ1	YIL104C	HAP1	P0CE41	1502 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms