RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C RIX7Q07844 837 aaKnown RBP11.4□□□□□ -0.58
SOD2YHR008C YLL066CQ99208 1374 aa11.4□□□□□ -0.59
SOD2YHR008C DPS1P04802 557 aaKnown RBP11.39□□□□□ -0.59
SOD2YHR008C NYV1Q12255 253 aa11.39□□□□□ -0.59
SOD2YHR008C TOM1Q03280 3268 aa11.37□□□□□ -0.59
SOD2YHR008C YML133CQ03099 1374 aa11.36□□□□□ -0.59
SOD2YHR008C YLL067CQ07888 1374 aa11.36□□□□□ -0.59
SOD2YHR008C POM152P39685 1337 aa11.35□□□□□ -0.59
SOD2YHR008C ETP1P38748 585 aaKnown RBP11.35□□□□□ -0.59
SOD2YHR008C RPS9BP05755 195 aaKnown RBP11.34□□□□□ -0.59
SOD2YHR008C OSM1P21375 501 aaKnown RBP11.34□□□□□ -0.59
SOD2YHR008C GAS4Q08271 471 aa11.34□□□□□ -0.59
SOD2YHR008C SLI15P38283 698 aa11.33□□□□□ -0.6
SOD2YHR008C NST1P53935 1240 aa11.31□□□□□ -0.6
SOD2YHR008C RTF1P53064 558 aa11.3□□□□□ -0.6
SOD2YHR008C INP54Q08227 384 aaKnown RBP11.3□□□□□ -0.6
SOD2YHR008C RIM15P43565 1770 aa11.29□□□□□ -0.6
SOD2YHR008C RET1P22276 1149 aaKnown RBP11.29□□□□□ -0.6
SOD2YHR008C PFF1P38244 976 aa11.29□□□□□ -0.6
SOD2YHR008C THS1P04801 734 aaKnown RBP11.28□□□□□ -0.6
SOD2YHR008C SCT1P32784 759 aa11.28□□□□□ -0.6
SOD2YHR008C PDI1P17967 522 aaKnown RBP11.27□□□□□ -0.61
SOD2YHR008C YBP2P53169 641 aa11.26□□□□□ -0.61
SOD2YHR008C ATG20Q07528 640 aa11.26□□□□□ -0.61
SOD2YHR008C YLR278CQ05854 1341 aa11.26□□□□□ -0.61
SOD2YHR008C SDH2P21801 266 aa11.25□□□□□ -0.61
SOD2YHR008C RTG2P32608 588 aaKnown RBP11.25□□□□□ -0.61
SOD2YHR008C TOP1P04786 769 aa11.24□□□□□ -0.61
SOD2YHR008C SMY1P32364 656 aaKnown RBP11.24□□□□□ -0.61
SOD2YHR008C TUM1Q08686 304 aaKnown RBP11.24□□□□□ -0.61
SOD2YHR008C SHC1P39000 512 aa11.23□□□□□ -0.61
SOD2YHR008C CTI6Q08923 506 aa11.23□□□□□ -0.61
SOD2YHR008C SEC3P33332 1336 aaKnown RBP11.22□□□□□ -0.61
SOD2YHR008C GRX4P32642 244 aa11.2□□□□□ -0.62
SOD2YHR008C MAC1P35192 417 aa11.2□□□□□ -0.62
SOD2YHR008C VHR2P40041 505 aa11.2□□□□□ -0.62
SOD2YHR008C ICL1P28240 557 aaPredicted RBP11.19□□□□□ -0.62
SOD2YHR008C ERO1Q03103 563 aa11.19□□□□□ -0.62
SOD2YHR008C FKH1P40466 484 aa11.18□□□□□ -0.62
SOD2YHR008C TAP42Q04372 366 aa11.17□□□□□ -0.62
SOD2YHR008C AUS1Q08409 1394 aa11.16□□□□□ -0.62
SOD2YHR008C LPD1P09624 499 aaKnown RBP11.16□□□□□ -0.62
SOD2YHR008C SRF1Q12516 437 aa11.16□□□□□ -0.62
SOD2YHR008C YKU70P32807 602 aa11.15□□□□□ -0.62
SOD2YHR008C YIL089WP40500 205 aa11.14□□□□□ -0.63
SOD2YHR008C NUP145P49687 1317 aa11.13□□□□□ -0.63
SOD2YHR008C TEA1P47988 759 aa11.13□□□□□ -0.63
SOD2YHR008C BUD27P43573 796 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
SOD2YHR008C RAT1Q02792 1006 aaKnown RBP11.12□□□□□ -0.63
SOD2YHR008C IRC3Q06683 689 aa11.12□□□□□ -0.63
SOD2YHR008C MDG1P53885 366 aa11.11□□□□□ -0.63
SOD2YHR008C CTF4Q01454 927 aa11.11□□□□□ -0.63
SOD2YHR008C TIF6Q12522 245 aaKnown RBP11.11□□□□□ -0.63
SOD2YHR008C SIT4P20604 311 aa11.1□□□□□ -0.63
SOD2YHR008C DIP2Q12220 943 aaPredicted RBP11.1□□□□□ -0.63
SOD2YHR008C GRX6Q12438 231 aa11.1□□□□□ -0.63
SOD2YHR008C BDF2Q07442 638 aa11.09□□□□□ -0.63
SOD2YHR008C TYW1Q08960 810 aaKnown RBP11.09□□□□□ -0.63
SOD2YHR008C ORC1P54784 914 aaPredicted RBP11.08□□□□□ -0.64
SOD2YHR008C RMT2Q03305 412 aa11.08□□□□□ -0.64
SOD2YHR008C DIB1Q06819 143 aaPredicted RBP11.08□□□□□ -0.64
SOD2YHR008C HIM1Q06674 414 aa11.07□□□□□ -0.64
SOD2YHR008C SER1P33330 395 aaKnown RBP11.06□□□□□ -0.64
SOD2YHR008C PIB1Q06651 286 aa11.06□□□□□ -0.64
SOD2YHR008C PHM7Q12252 991 aa11.06□□□□□ -0.64
SOD2YHR008C MSM1P22438 575 aa11.05□□□□□ -0.64
SOD2YHR008C GLC3P32775 704 aa11.05□□□□□ -0.64
SOD2YHR008C YKR023WP36119 530 aaKnown RBP11.05□□□□□ -0.64
SOD2YHR008C FET4P40988 552 aa11.05□□□□□ -0.64
SOD2YHR008C HSP104P31539 908 aaKnown RBP11.04□□□□□ -0.64
SOD2YHR008C PEA2P40091 420 aa11.04□□□□□ -0.64
SOD2YHR008C YFR016CP43597 1233 aaKnown RBP11.04□□□□□ -0.64
SOD2YHR008C DSD1P53095 428 aa11.04□□□□□ -0.64
SOD2YHR008C NOP53Q12080 455 aaKnown RBP11.04□□□□□ -0.64
SOD2YHR008C TIM50Q02776 476 aa11.03□□□□□ -0.64
SOD2YHR008C RTG3P38165 486 aa11.01□□□□□ -0.65
SOD2YHR008C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.01□□□□□ -0.65not detected
SOD2YHR008C NCS6P53088 359 aa11.01□□□□□ -0.65
SOD2YHR008C CAF20P12962 161 aaKnown RBP11□□□□□ -0.65
SOD2YHR008C GAP1P19145 602 aaPredicted RBP11□□□□□ -0.65
SOD2YHR008C AIM7Q12156 149 aa10.99□□□□□ -0.65
SOD2YHR008C CWC15Q03772 175 aaKnown RBP10.98□□□□□ -0.65
SOD2YHR008C DPL1Q05567 589 aa10.98□□□□□ -0.65
SOD2YHR008C HVG1P0CE11 249 aa10.97□□□□□ -0.65
SOD2YHR008C BSD2P38356 321 aa10.97□□□□□ -0.65
SOD2YHR008C EMP47P43555 445 aa10.97□□□□□ -0.65
SOD2YHR008C YGL082WP53155 381 aa10.97□□□□□ -0.65
SOD2YHR008C FIG2P25653 1609 aa10.96□□□□□ -0.65
SOD2YHR008C YGR117CP53270 476 aa10.95□□□□□ -0.66
SOD2YHR008C AOS1Q06624 347 aa10.95□□□□□ -0.66
SOD2YHR008C UBP16Q02863 499 aa10.94□□□□□ -0.66
SOD2YHR008C SSP2Q08646 371 aa10.94□□□□□ -0.66
SOD2YHR008C KAR2P16474 682 aaKnown RBP10.92□□□□□ -0.66
SOD2YHR008C KCC4P25389 1037 aa10.92□□□□□ -0.66
SOD2YHR008C SAS4Q04003 481 aa10.92□□□□□ -0.66
SOD2YHR008C ALE1Q08548 619 aa10.92□□□□□ -0.66
SOD2YHR008C RPN1P38764 993 aaKnown RBP10.91□□□□□ -0.66
SOD2YHR008C SYF1Q04048 859 aaPredicted RBP10.91□□□□□ -0.66
SOD2YHR008C CST9Q06032 482 aa10.91□□□□□ -0.66
SOD2YHR008C UTP10P42945 1769 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms