RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RPN12P32496 274 aa5.66□□□□□ -1.5
SEC9YGR009C STM1P39015 273 aaKnown RBP5.66□□□□□ -1.5
SEC9YGR009C SCY1P53009 804 aa5.66□□□□□ -1.5
SEC9YGR009C ALD3P54114 506 aa5.66□□□□□ -1.5
SEC9YGR009C NSE3Q05541 303 aa5.66□□□□□ -1.5
SEC9YGR009C RRP9Q06506 573 aaKnown RBP5.66□□□□□ -1.5
SEC9YGR009C CYB2P00175 591 aa5.65□□□□□ -1.51
SEC9YGR009C TFG1P41895 735 aaPredicted RBP5.65□□□□□ -1.51
SEC9YGR009C TIM11P81449 96 aaPredicted RBP5.65□□□□□ -1.51
SEC9YGR009C CMP2P14747 604 aa5.64□□□□□ -1.51
SEC9YGR009C UBP1P25037 809 aa5.64□□□□□ -1.51
SEC9YGR009C OCA1P50946 238 aaPredicted RBP5.64□□□□□ -1.51
SEC9YGR009C PUF6Q04373 656 aaKnown RBP5.64□□□□□ -1.51
SEC9YGR009C RUD3Q12234 484 aaKnown RBP5.64□□□□□ -1.51
SEC9YGR009C GLE1Q12315 538 aa5.64□□□□□ -1.51
SEC9YGR009C MAK16P10962 306 aaPredicted RBP5.64□□□□□ -1.51
SEC9YGR009C PHM6Q05637 104 aa5.64□□□□□ -1.51
SEC9YGR009C PSR1Q07800 427 aa5.64□□□□□ -1.51
SEC9YGR009C MPH3P0CE00 602 aa5.63□□□□□ -1.51
SEC9YGR009C RPC82P32349 654 aa5.63□□□□□ -1.51
SEC9YGR009C SEC6P32844 805 aa5.63□□□□□ -1.51
SEC9YGR009C RRB1Q04225 511 aaKnown RBP5.63□□□□□ -1.51
SEC9YGR009C SEC3P33332 1336 aaKnown RBP5.63□□□□□ -1.51
SEC9YGR009C RRP15Q06511 250 aaPredicted RBP5.62□□□□□ -1.51
SEC9YGR009C NOP14Q99207 810 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C ARC19P33204 171 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C TFC3P34111 1160 aa5.62□□□□□ -1.51
SEC9YGR009C SAS3P34218 831 aa5.62□□□□□ -1.51
SEC9YGR009C VPS24P36095 224 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C TPS3P38426 1054 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C RTT106P40161 455 aa5.62□□□□□ -1.51
SEC9YGR009C YNL247WP53852 767 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C NFI1Q12216 726 aa5.62□□□□□ -1.51
SEC9YGR009C DBP10Q12389 995 aaKnown RBP5.62□□□□□ -1.51
SEC9YGR009C CDC31P06704 161 aaKnown RBP5.61□□□□□ -1.51
SEC9YGR009C KEL2P50090 882 aa5.61□□□□□ -1.51
SEC9YGR009C ITT1Q04638 464 aa5.61□□□□□ -1.51
SEC9YGR009C CLN1P20437 546 aa5.6□□□□□ -1.51
SEC9YGR009C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SEC9YGR009C BUD31P25337 157 aaPredicted RBP5.6□□□□□ -1.51
SEC9YGR009C RTG2P32608 588 aaKnown RBP5.6□□□□□ -1.51
SEC9YGR009C GRX4P32642 244 aa5.6□□□□□ -1.51
SEC9YGR009C SLX5P32828 619 aaKnown RBP5.6□□□□□ -1.51
SEC9YGR009C RPC37P36121 282 aa5.6□□□□□ -1.51
SEC9YGR009C FUI1P38196 639 aa5.6□□□□□ -1.51
SEC9YGR009C SIC1P38634 284 aa5.6□□□□□ -1.51
SEC9YGR009C OYE2Q03558 400 aaKnown RBP5.6□□□□□ -1.51
SEC9YGR009C YVC1Q12324 675 aa5.6□□□□□ -1.51
SEC9YGR009C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SEC9YGR009C RKM3P38222 552 aa5.6□□□□□ -1.51
SEC9YGR009C ALD2P47771 506 aa5.6□□□□□ -1.51
SEC9YGR009C VTI1Q04338 217 aa5.6□□□□□ -1.51
SEC9YGR009C TCB1Q12466 1186 aa5.6□□□□□ -1.51
SEC9YGR009C CLC1P17891 233 aa5.59□□□□□ -1.51
SEC9YGR009C TRX2P22803 104 aaKnown RBP5.59□□□□□ -1.51
SEC9YGR009C NPL4P33755 580 aa5.59□□□□□ -1.51
SEC9YGR009C BYE1P36106 594 aa5.59□□□□□ -1.51
SEC9YGR009C BCH2P36122 765 aa5.59□□□□□ -1.51
SEC9YGR009C YNR021WP53723 404 aaKnown RBP5.59□□□□□ -1.51
SEC9YGR009C CTR9P89105 1077 aa5.59□□□□□ -1.51
SEC9YGR009C MTC5Q03897 1148 aa5.59□□□□□ -1.51
SEC9YGR009C COG8Q04632 607 aa5.59□□□□□ -1.51
SEC9YGR009C THS1P04801 734 aaKnown RBP5.58□□□□□ -1.52
SEC9YGR009C ANP1P32629 500 aa5.58□□□□□ -1.52
SEC9YGR009C PPG1P32838 368 aa5.58□□□□□ -1.52
SEC9YGR009C NIP100P33420 868 aa5.58□□□□□ -1.52
SEC9YGR009C ESL2P36168 1195 aa5.58□□□□□ -1.52
SEC9YGR009C GYP7P48365 746 aa5.58□□□□□ -1.52
SEC9YGR009C HPC2Q01448 625 aa5.58□□□□□ -1.52
SEC9YGR009C YOR389WQ08912 624 aa5.58□□□□□ -1.52
SEC9YGR009C YOL098CQ12496 1037 aa5.58□□□□□ -1.52
SEC9YGR009C SXM1Q04175 944 aaKnown RBP5.58□□□□□ -1.52
SEC9YGR009C UGA3P26370 528 aa5.57□□□□□ -1.52
SEC9YGR009C DPB3P27344 201 aa5.57□□□□□ -1.52
SEC9YGR009C GUA1P38625 525 aaKnown RBP5.57□□□□□ -1.52
SEC9YGR009C GLO3P38682 493 aaKnown RBP5.57□□□□□ -1.52
SEC9YGR009C CCM1P48237 864 aaPredicted RBP5.57□□□□□ -1.52
SEC9YGR009C SPO71Q03868 1245 aa5.57□□□□□ -1.52
SEC9YGR009C IRC3Q06683 689 aa5.57□□□□□ -1.52
SEC9YGR009C PCL8Q08966 492 aa5.57□□□□□ -1.52
SEC9YGR009C LSP1Q12230 341 aaKnown RBP5.57□□□□□ -1.52
SEC9YGR009C VMA1P17255 1071 aaKnown RBP5.56□□□□□ -1.52
SEC9YGR009C GCD6P32501 712 aaKnown RBP5.56□□□□□ -1.52
SEC9YGR009C BDP1P46678 594 aa5.56□□□□□ -1.52
SEC9YGR009C DSL1P53847 754 aa5.56□□□□□ -1.52
SEC9YGR009C CLP1Q08685 445 aaPredicted RBP5.56□□□□□ -1.52
SEC9YGR009C APC2Q12440 853 aa5.56□□□□□ -1.52
SEC9YGR009C SIT4P20604 311 aa5.56□□□□□ -1.52
SEC9YGR009C CDC3P32457 520 aaKnown RBP5.56□□□□□ -1.52
SEC9YGR009C KDX1P36005 433 aa5.56□□□□□ -1.52
SEC9YGR009C YTA6P40328 754 aa5.56□□□□□ -1.52
SEC9YGR009C ALG12P53730 551 aa5.56□□□□□ -1.52
SEC9YGR009C GRC3Q07845 632 aa5.56□□□□□ -1.52
SEC9YGR009C APN1P22936 367 aa5.55□□□□□ -1.52
SEC9YGR009C LAM1P38851 1228 aa5.55□□□□□ -1.52
SEC9YGR009C TGL3P40308 642 aa5.55□□□□□ -1.52
SEC9YGR009C BUD27P43573 796 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SEC9YGR009C ERV41Q04651 352 aa5.55□□□□□ -1.52
SEC9YGR009C SVF1Q05515 481 aa5.55□□□□□ -1.52
SEC9YGR009C AIM7Q12156 149 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms