RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	YNL108C	P53929	270 aa		8.1	□□□□□ -1.11
HIM1	YDR317W	ISF1	P32488	338 aa		8.09	□□□□□ -1.11
HIM1	YDR317W	BIM1	P40013	344 aa		8.08	□□□□□ -1.12
HIM1	YDR317W	ATG32	P40458	529 aa		8.08	□□□□□ -1.12
HIM1	YDR317W	APP1	P53933	587 aa		8.08	□□□□□ -1.12
HIM1	YDR317W	ASH1	P34233	588 aa		8.07	□□□□□ -1.12
HIM1	YDR317W	NAF1	P53919	492 aa	Known RBP	8.07	□□□□□ -1.12
HIM1	YDR317W	RGA2	Q06407	1009 aa		8.06	□□□□□ -1.12
HIM1	YDR317W	MCM16	Q12262	181 aa		8.06	□□□□□ -1.12
HIM1	YDR317W	ENO2	P00925	437 aa	Known RBP	8.05	□□□□□ -1.12
HIM1	YDR317W	SUP45	P12385	437 aa	Known RBP	8.04	□□□□□ -1.12
HIM1	YDR317W	MRT4	P33201	236 aa	Known RBP	8.04	□□□□□ -1.12
HIM1	YDR317W	AFT1	P22149	690 aa		8.03	□□□□□ -1.12
HIM1	YDR317W	EMP47	P43555	445 aa		8.03	□□□□□ -1.12
HIM1	YDR317W	SPT5	P27692	1063 aa	Known RBP	8.02	□□□□□ -1.13
HIM1	YDR317W	GUT2	P32191	649 aa		8.01	□□□□□ -1.13
HIM1	YDR317W	EMW1	P42842	904 aa	Known RBP	8.01	□□□□□ -1.13
HIM1	YDR317W	BRE2	P43132	505 aa		8.01	□□□□□ -1.13
HIM1	YDR317W	FRA1	Q07825	749 aa		8.01	□□□□□ -1.13
HIM1	YDR317W	TIF1	P10081	395 aa	Known RBP	8	□□□□□ -1.13
HIM1	YDR317W	HST3	P53687	447 aa		8	□□□□□ -1.13
HIM1	YDR317W	HGH1	P48362	394 aa	Known RBP	7.98	□□□□□ -1.13
HIM1	YDR317W	STE20	Q03497	939 aa	Known RBP	7.98	□□□□□ -1.13
HIM1	YDR317W	YBL086C	P38177	466 aa		7.97	□□□□□ -1.13
HIM1	YDR317W	YJR115W	P47152	169 aa		7.97	□□□□□ -1.13
HIM1	YDR317W	RIM21	P48565	533 aa		7.97	□□□□□ -1.13
HIM1	YDR317W	RDS2	P19541	446 aa	Known RBP	7.95	□□□□□ -1.14
HIM1	YDR317W	APL6	P46682	809 aa		7.95	□□□□□ -1.14
HIM1	YDR317W	MSB3	P48566	633 aa	Predicted RBP	7.95	□□□□□ -1.14
HIM1	YDR317W	ENO1	P00924	437 aa	Known RBP	7.94	□□□□□ -1.14
HIM1	YDR317W	UGA3	P26370	528 aa		7.93	□□□□□ -1.14
HIM1	YDR317W	RTG2	P32608	588 aa	Known RBP	7.93	□□□□□ -1.14
HIM1	YDR317W	MKS1	P34072	584 aa		7.93	□□□□□ -1.14
HIM1	YDR317W	DFG5	Q05031	458 aa		7.93	□□□□□ -1.14
HIM1	YDR317W	MRX10	Q05648	414 aa		7.93	□□□□□ -1.14
HIM1	YDR317W	HAL5	P38970	855 aa	Known RBP	7.92	□□□□□ -1.14
HIM1	YDR317W	YPR204W	Q08995	1032 aa		7.92	□□□□□ -1.14
HIM1	YDR317W	RPL34B	P40525	121 aa	Known RBP	7.91	□□□□□ -1.14
HIM1	YDR317W	PTK2	P47116	818 aa	Known RBP	7.91	□□□□□ -1.14
HIM1	YDR317W	ATG20	Q07528	640 aa		7.91	□□□□□ -1.14
HIM1	YDR317W	ISR1	Q06098	443 aa	Known RBP	7.9	□□□□□ -1.14
HIM1	YDR317W	FBP26	P32604	452 aa		7.89	□□□□□ -1.15
HIM1	YDR317W	SOH1	P38633	127 aa		7.89	□□□□□ -1.15
HIM1	YDR317W	GCR2	Q01722	534 aa		7.89	□□□□□ -1.15
HIM1	YDR317W	YPP1	P46951	817 aa		7.88	□□□□□ -1.15
HIM1	YDR317W	MRX12	P47084	519 aa		7.87	□□□□□ -1.15
HIM1	YDR317W	AAD14	P42884	376 aa		7.86	□□□□□ -1.15
HIM1	YDR317W	STE6	P12866	1290 aa		7.85	□□□□□ -1.15
HIM1	YDR317W	MET22	P32179	357 aa		7.85	□□□□□ -1.15
HIM1	YDR317W	ISU1	Q03020	165 aa		7.85	□□□□□ -1.15
HIM1	YDR317W	DLD1	P32891	587 aa		7.84	□□□□□ -1.15
HIM1	YDR317W	ENV9	Q08651	330 aa		7.83	□□□□□ -1.16
HIM1	YDR317W	PEP12	P32854	288 aa		7.82	□□□□□ -1.16
HIM1	YDR317W	BDS1	Q08347	646 aa		7.82	□□□□□ -1.16
HIM1	YDR317W	SRF1	Q12516	437 aa		7.82	□□□□□ -1.16
HIM1	YDR317W	KTR7	P40504	517 aa		7.8	□□□□□ -1.16
HIM1	YDR317W	ARG82	P07250	355 aa		7.79	□□□□□ -1.16
HIM1	YDR317W	MIP1	P15801	1254 aa		7.79	□□□□□ -1.16
HIM1	YDR317W	UTP13	Q05946	817 aa	Known RBP	7.79	□□□□□ -1.16
HIM1	YDR317W	HDA3	Q06623	655 aa		7.79	□□□□□ -1.16
HIM1	YDR317W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.79	□□□□□ -1.16	not detected
HIM1	YDR317W	TTI1	P36097	1038 aa		7.78	□□□□□ -1.16
HIM1	YDR317W	RTT106	P40161	455 aa		7.78	□□□□□ -1.16
HIM1	YDR317W	NUP85	P46673	744 aa		7.78	□□□□□ -1.16
HIM1	YDR317W	YDR444W	Q04093	687 aa		7.78	□□□□□ -1.16
HIM1	YDR317W	OPT2	Q06593	877 aa		7.78	□□□□□ -1.16
HIM1	YDR317W	CPS1	P27614	576 aa		7.77	□□□□□ -1.17
HIM1	YDR317W	GAR1	P28007	205 aa	Known RBP	7.77	□□□□□ -1.17
HIM1	YDR317W	UTR2	P32623	467 aa		7.77	□□□□□ -1.17
HIM1	YDR317W	ATG3	P40344	310 aa		7.77	□□□□□ -1.17
HIM1	YDR317W	YJR098C	P47139	656 aa		7.77	□□□□□ -1.17
HIM1	YDR317W	LCB5	Q06147	687 aa	Known RBP	7.77	□□□□□ -1.17
HIM1	YDR317W	WTM2	Q12206	467 aa		7.77	□□□□□ -1.17
HIM1	YDR317W	SPT2	P06843	333 aa	Predicted RBP	7.76	□□□□□ -1.17
HIM1	YDR317W	DAT1	P13483	248 aa	Known RBP	7.74	□□□□□ -1.17
HIM1	YDR317W	SLX8	P40072	274 aa		7.73	□□□□□ -1.17
HIM1	YDR317W	TCB1	Q12466	1186 aa		7.73	□□□□□ -1.17
HIM1	YDR317W	UTP7	P40055	554 aa	Known RBP	7.72	□□□□□ -1.17
HIM1	YDR317W	LSC2	P53312	427 aa		7.72	□□□□□ -1.17
HIM1	YDR317W	RGA1	P39083	1007 aa		7.71	□□□□□ -1.18
HIM1	YDR317W	AIM9	P40053	627 aa	Known RBP	7.71	□□□□□ -1.18
HIM1	YDR317W	PDI1	P17967	522 aa	Known RBP	7.7	□□□□□ -1.18
HIM1	YDR317W	TGL4	P36165	910 aa		7.69	□□□□□ -1.18
HIM1	YDR317W	ACS2	P52910	683 aa	Known RBP	7.69	□□□□□ -1.18
HIM1	YDR317W	GLY1	P37303	387 aa	Known RBP	7.68	□□□□□ -1.18
HIM1	YDR317W	DLD3	P39976	496 aa	Known RBP	7.68	□□□□□ -1.18
HIM1	YDR317W	YDL176W	Q12027	708 aa		7.68	□□□□□ -1.18
HIM1	YDR317W	TY1A-BL	Q12266	440 aa		7.68	□□□□□ -1.18
HIM1	YDR317W	RLF2	Q12495	606 aa		7.68	□□□□□ -1.18
HIM1	YDR317W	SWI5	P08153	709 aa		7.67	□□□□□ -1.18
HIM1	YDR317W	TBS1	P38114	1094 aa		7.67	□□□□□ -1.18
HIM1	YDR317W	PUP1	P25043	261 aa		7.66	□□□□□ -1.18
HIM1	YDR317W	NTH2	P35172	780 aa		7.66	□□□□□ -1.18
HIM1	YDR317W	SSN3	P39073	555 aa		7.66	□□□□□ -1.18
HIM1	YDR317W	TY1A-DR3	Q12441	440 aa		7.66	□□□□□ -1.18
HIM1	YDR317W	RPS6A	P0CX37	236 aa	Known RBP	7.65	□□□□□ -1.18
HIM1	YDR317W	RPS6B	P0CX38	236 aa	Predicted RBP	7.65	□□□□□ -1.18
HIM1	YDR317W	SCW11	P53189	542 aa		7.65	□□□□□ -1.18
HIM1	YDR317W	CAF120	P53836	1060 aa		7.65	□□□□□ -1.18
HIM1	YDR317W	ECM23	Q02710	187 aa		7.65	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms