RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C FPK1P53739 893 aa2.59□□□□□ -1.99
MSH6YDR097C GYP5Q12344 894 aa2.59□□□□□ -1.99
MSH6YDR097C ENO2P00925 437 aaKnown RBP2.59□□□□□ -1.99
MSH6YDR097C PSE1P32337 1089 aaKnown RBP2.59□□□□□ -1.99
MSH6YDR097C PEP7P32609 515 aa2.59□□□□□ -1.99
MSH6YDR097C NIS1P53939 407 aa2.59□□□□□ -1.99
MSH6YDR097C KAR5Q04746 504 aa2.59□□□□□ -1.99
MSH6YDR097C DRS2P39524 1355 aa2.59□□□□□ -1.99
MSH6YDR097C ARO1P08566 1588 aaKnown RBP2.59□□□□□ -2
MSH6YDR097C OYE2Q03558 400 aaKnown RBP2.59□□□□□ -2
MSH6YDR097C YDR344CQ05510 147 aa2.59□□□□□ -2
MSH6YDR097C KEX1P09620 729 aa2.58□□□□□ -2
MSH6YDR097C NUP170P38181 1502 aa2.58□□□□□ -2
MSH6YDR097C UFD4P33202 1483 aa2.58□□□□□ -2
MSH6YDR097C TY3B-GQ99315 1547 aa2.58□□□□□ -2
MSH6YDR097C VMA1P17255 1071 aaKnown RBP2.58□□□□□ -2
MSH6YDR097C PUP1P25043 261 aa2.58□□□□□ -2
MSH6YDR097C PPG1P32838 368 aa2.58□□□□□ -2
MSH6YDR097C MMS22Q06164 1454 aa2.58□□□□□ -2
MSH6YDR097C TBF1Q02457 562 aa2.57□□□□□ -2
MSH6YDR097C LDB19Q12502 818 aa2.57□□□□□ -2
MSH6YDR097C ORC6P38826 435 aa2.57□□□□□ -2
MSH6YDR097C ALD4P46367 519 aaKnown RBP2.57□□□□□ -2
MSH6YDR097C NAP1P25293 417 aaKnown RBP2.57□□□□□ -2
MSH6YDR097C TGL4P36165 910 aa2.57□□□□□ -2
MSH6YDR097C BRN1P38170 754 aa2.57□□□□□ -2
MSH6YDR097C SSF1P38789 453 aaPredicted RBP2.57□□□□□ -2
MSH6YDR097C POL32P47110 350 aa2.57□□□□□ -2
MSH6YDR097C BCK1Q01389 1478 aa2.57□□□□□ -2
MSH6YDR097C RSC30P38781 883 aa2.56□□□□□ -2
MSH6YDR097C CDC73Q06697 393 aa2.56□□□□□ -2
MSH6YDR097C USO1P25386 1790 aa2.56□□□□□ -2
MSH6YDR097C SIT4P20604 311 aa2.56□□□□□ -2
MSH6YDR097C GUT1P32190 709 aa2.56□□□□□ -2
MSH6YDR097C YGR273CP53329 174 aa2.56□□□□□ -2
MSH6YDR097C ERP5P38819 212 aa2.55□□□□□ -2
MSH6YDR097C CWC24P53769 259 aa2.55□□□□□ -2
MSH6YDR097C TIF11P38912 153 aaKnown RBP2.55□□□□□ -2
MSH6YDR097C YRR1Q12172 810 aa2.55□□□□□ -2
MSH6YDR097C YJR008WP47085 338 aa2.55□□□□□ -2
MSH6YDR097C ALD2P47771 506 aa2.55□□□□□ -2
MSH6YDR097C PEX29Q03370 554 aa2.55□□□□□ -2
MSH6YDR097C ULS1Q08562 1619 aa2.54□□□□□ -2
MSH6YDR097C RGR1P19263 1082 aa2.54□□□□□ -2
MSH6YDR097C HEM3P28789 327 aa2.54□□□□□ -2
MSH6YDR097C GLO3P38682 493 aaKnown RBP2.54□□□□□ -2
MSH6YDR097C SEN54Q02825 467 aaPredicted RBP2.54□□□□□ -2
MSH6YDR097C AI4P03878 556 aa2.54□□□□□ -2
MSH6YDR097C KEX2P13134 814 aa2.54□□□□□ -2
MSH6YDR097C YHL050CP38721 697 aa2.54□□□□□ -2
MSH6YDR097C YHR219WP38900 624 aa2.54□□□□□ -2
MSH6YDR097C VAC8P39968 578 aa2.54□□□□□ -2
MSH6YDR097C TFG1P41895 735 aaPredicted RBP2.54□□□□□ -2
MSH6YDR097C YEL077CQ3E7X8 1277 aa2.54□□□□□ -2
MSH6YDR097C SNT2P53127 1403 aa2.54□□□□□ -2
MSH6YDR097C SUP45P12385 437 aaKnown RBP2.53□□□□□ -2
MSH6YDR097C SRP40P32583 406 aaPredicted RBP2.53□□□□□ -2
MSH6YDR097C PUN1Q06991 263 aa2.53□□□□□ -2
MSH6YDR097C IOC2Q12072 812 aa2.53□□□□□ -2
MSH6YDR097C MPH3P0CE00 602 aa2.53□□□□□ -2.01
MSH6YDR097C CSE4P36012 229 aa2.53□□□□□ -2.01
MSH6YDR097C MAD1P40957 749 aa2.53□□□□□ -2.01
MSH6YDR097C SCC2Q04002 1493 aa2.52□□□□□ -2.01
MSH6YDR097C EDE1P34216 1381 aa2.52□□□□□ -2.01
MSH6YDR097C PDI1P17967 522 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C YKL091CP33324 310 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C MVP1P40959 511 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C EMP47P43555 445 aa2.52□□□□□ -2.01
MSH6YDR097C YOL036WQ08206 761 aa2.52□□□□□ -2.01
MSH6YDR097C MCM2P29469 868 aa2.52□□□□□ -2.01
MSH6YDR097C SEC8P32855 1065 aa2.52□□□□□ -2.01
MSH6YDR097C ILV3P39522 585 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C APL6P46682 809 aa2.52□□□□□ -2.01
MSH6YDR097C MRX10Q05648 414 aa2.52□□□□□ -2.01
MSH6YDR097C BMT6Q12291 365 aa2.52□□□□□ -2.01
MSH6YDR097C TRM1P15565 570 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C GCD11P32481 527 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C MET1P36150 593 aa2.52□□□□□ -2.01
MSH6YDR097C SAP30P38429 201 aa2.52□□□□□ -2.01
MSH6YDR097C HST2P53686 357 aa2.52□□□□□ -2.01
MSH6YDR097C FOX2Q02207 900 aaKnown RBP2.52□□□□□ -2.01
MSH6YDR097C RRP15Q06511 250 aaPredicted RBP2.52□□□□□ -2.01
MSH6YDR097C RPP1BP10622 106 aaKnown RBP2.51□□□□□ -2.01
MSH6YDR097C ERF2Q06551 359 aa2.51□□□□□ -2.01
MSH6YDR097C PDR12Q02785 1511 aa2.51□□□□□ -2.01
MSH6YDR097C ATE1P16639 503 aa2.51□□□□□ -2.01
MSH6YDR097C PEP12P32854 288 aa2.51□□□□□ -2.01
MSH6YDR097C MID1P41821 548 aa2.51□□□□□ -2.01
MSH6YDR097C ALD6P54115 500 aaKnown RBP2.51□□□□□ -2.01
MSH6YDR097C NPL4P33755 580 aa2.51□□□□□ -2.01
MSH6YDR097C STM1P39015 273 aaKnown RBP2.51□□□□□ -2.01
MSH6YDR097C SVF1Q05515 481 aa2.51□□□□□ -2.01
MSH6YDR097C BUD3P25558 1636 aa2.5□□□□□ -2.01
MSH6YDR097C TSR4P25040 408 aa2.5□□□□□ -2.01
MSH6YDR097C RNH70P53331 553 aa2.5□□□□□ -2.01
MSH6YDR097C AIR2Q12476 344 aaKnown RBP2.5□□□□□ -2.01
MSH6YDR097C RTG1P32607 177 aa2.5□□□□□ -2.01
MSH6YDR097C PAM1P37304 830 aaKnown RBP2.5□□□□□ -2.01
MSH6YDR097C STU1P38198 1513 aa2.5□□□□□ -2.01
MSH6YDR097C SOH1P38633 127 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms