RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W PKH3Q03306 898 aaPredicted RBP6.84□□□□□ -1.31
CDC28YBR160W SCC2Q04002 1493 aa6.84□□□□□ -1.31
CDC28YBR160W PDC1P06169 563 aaKnown RBP6.83□□□□□ -1.32
CDC28YBR160W TPD3P31383 635 aa6.83□□□□□ -1.32
CDC28YBR160W RKR1Q04781 1562 aa6.82□□□□□ -1.32
CDC28YBR160W RPA14P50106 137 aa6.82□□□□□ -1.32
CDC28YBR160W YDL206WQ12424 762 aa6.82□□□□□ -1.32
CDC28YBR160W BDP1P46678 594 aa6.81□□□□□ -1.32
CDC28YBR160W RAD59Q12223 238 aa6.81□□□□□ -1.32
CDC28YBR160W TBF1Q02457 562 aa6.8□□□□□ -1.32
CDC28YBR160W YPR097WQ06839 1073 aa6.8□□□□□ -1.32
CDC28YBR160W SMC4Q12267 1418 aa6.8□□□□□ -1.32
CDC28YBR160W RRD1P40454 393 aaKnown RBP6.79□□□□□ -1.32
CDC28YBR160W KXD1P53158 218 aa6.79□□□□□ -1.32
CDC28YBR160W SRC1Q03707 834 aa6.79□□□□□ -1.32
CDC28YBR160W RPO31P04051 1460 aa6.79□□□□□ -1.32
CDC28YBR160W HXT10P43581 546 aa6.78□□□□□ -1.32
CDC28YBR160W ARG8P18544 423 aa6.77□□□□□ -1.33
CDC28YBR160W FRK1Q03002 865 aaPredicted RBP6.77□□□□□ -1.33
CDC28YBR160W ALR1Q08269 859 aa6.77□□□□□ -1.33
CDC28YBR160W SNQ2P32568 1501 aaKnown RBP6.76□□□□□ -1.33
CDC28YBR160W TFB3Q03290 321 aa6.76□□□□□ -1.33
CDC28YBR160W TOP2P06786 1428 aaKnown RBP6.76□□□□□ -1.33
CDC28YBR160W CLA4P48562 842 aa6.75□□□□□ -1.33
CDC28YBR160W PEP1P32319 1579 aa6.74□□□□□ -1.33
CDC28YBR160W YCF1P39109 1515 aaKnown RBP6.72□□□□□ -1.33
CDC28YBR160W MAK16P10962 306 aaPredicted RBP6.72□□□□□ -1.33
CDC28YBR160W PKC1P24583 1151 aa6.72□□□□□ -1.33
CDC28YBR160W BRL1P38770 471 aa6.72□□□□□ -1.33
CDC28YBR160W PUS5Q06244 254 aa6.72□□□□□ -1.33
CDC28YBR160W SSM4P40318 1319 aa6.72□□□□□ -1.33
CDC28YBR160W KOG1P38873 1557 aa6.71□□□□□ -1.34
CDC28YBR160W HGH1P48362 394 aaKnown RBP6.71□□□□□ -1.34
CDC28YBR160W HED1Q03937 162 aa6.71□□□□□ -1.34
CDC28YBR160W RLF2Q12495 606 aa6.71□□□□□ -1.34
CDC28YBR160W STH1P32597 1359 aa6.7□□□□□ -1.34
CDC28YBR160W AIR1P40507 360 aaKnown RBP6.7□□□□□ -1.34
CDC28YBR160W CSE4P36012 229 aa6.69□□□□□ -1.34
CDC28YBR160W MLP2P40457 1679 aa6.68□□□□□ -1.34
CDC28YBR160W VAC17P25591 423 aa6.68□□□□□ -1.34
CDC28YBR160W GEA1P47102 1408 aaPredicted RBP6.67□□□□□ -1.34
CDC28YBR160W PDR15Q04182 1529 aaKnown RBP6.67□□□□□ -1.34
CDC28YBR160W CDC4P07834 779 aa6.67□□□□□ -1.34
CDC28YBR160W ENP1P38333 483 aaKnown RBP6.67□□□□□ -1.34
CDC28YBR160W FIG4P42837 879 aa6.67□□□□□ -1.34
CDC28YBR160W PAN1P32521 1480 aa6.66□□□□□ -1.34
CDC28YBR160W MDS3P53094 1487 aa6.66□□□□□ -1.34
CDC28YBR160W TRK1P12685 1235 aa6.66□□□□□ -1.34
CDC28YBR160W BIO2P32451 375 aa6.66□□□□□ -1.34
CDC28YBR160W YBL036CP38197 257 aa6.66□□□□□ -1.34
CDC28YBR160W NAF1P53919 492 aaKnown RBP6.66□□□□□ -1.34
CDC28YBR160W YPR084WQ06821 456 aa6.66□□□□□ -1.34
CDC28YBR160W MET32Q12041 191 aa6.66□□□□□ -1.34
CDC28YBR160W TY1B-DR3Q99231 1755 aa6.66□□□□□ -1.34
CDC28YBR160W SYH1Q02875 849 aaKnown RBP6.65□□□□□ -1.34
CDC28YBR160W TY2B-LR1P0C2J3 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-FP0CX63 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-GR2P0CX64 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-CP25384 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-DR2Q03494 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY1B-DR1Q03855 1755 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-DR3Q07791 1770 aaKnown RBP6.64□□□□□ -1.35
CDC28YBR160W TY2B-OR1Q12113 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-DR1Q12472 1770 aa6.64□□□□□ -1.35
CDC28YBR160W TY2B-OR2Q12501 1770 aa6.64□□□□□ -1.35
CDC28YBR160W SPT5P27692 1063 aaKnown RBP6.64□□□□□ -1.35
CDC28YBR160W TSC11P40061 1430 aa6.64□□□□□ -1.35
CDC28YBR160W ULS1Q08562 1619 aa6.64□□□□□ -1.35
CDC28YBR160W POL5P39985 1022 aaKnown RBP6.63□□□□□ -1.35
CDC28YBR160W SEC3P33332 1336 aaKnown RBP6.62□□□□□ -1.35
CDC28YBR160W TEC1P18412 486 aa6.62□□□□□ -1.35
CDC28YBR160W MRT4P33201 236 aaKnown RBP6.61□□□□□ -1.35
CDC28YBR160W IXR1P33417 597 aa6.61□□□□□ -1.35
CDC28YBR160W TY2B-BQ12491 1770 aa6.6□□□□□ -1.35
CDC28YBR160W KIP2P28743 706 aa6.6□□□□□ -1.35
CDC28YBR160W TY3B-GQ99315 1547 aa6.6□□□□□ -1.35
CDC28YBR160W SUP45P12385 437 aaKnown RBP6.59□□□□□ -1.35
CDC28YBR160W AFT1P22149 690 aa6.59□□□□□ -1.35
CDC28YBR160W YDJ1P25491 409 aaKnown RBP6.58□□□□□ -1.36
CDC28YBR160W ITT1Q04638 464 aa6.58□□□□□ -1.36
CDC28YBR160W FRA1Q07825 749 aa6.58□□□□□ -1.36
CDC28YBR160W MCM16Q12262 181 aa6.58□□□□□ -1.36
CDC28YBR160W GUT2P32191 649 aa6.57□□□□□ -1.36
CDC28YBR160W EMW1P42842 904 aaKnown RBP6.57□□□□□ -1.36
CDC28YBR160W BIM1P40013 344 aa6.56□□□□□ -1.36
CDC28YBR160W YJL007CP47080 104 aa6.56□□□□□ -1.36
CDC28YBR160W ASH1P34233 588 aa6.55□□□□□ -1.36
CDC28YBR160W ATG32P40458 529 aa6.55□□□□□ -1.36
CDC28YBR160W APL6P46682 809 aa6.55□□□□□ -1.36
CDC28YBR160W PDR10P51533 1564 aa6.55□□□□□ -1.36
CDC28YBR160W TY1B-HO13535 1793 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-DR5P0C2I2 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-DR6P0C2I3 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-LR2P0C2I5 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-LR3P0C2I6 1755 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W TY1B-PR1P0C2I9 1755 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W TY1B-PR2P0C2J0 1756 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-PR3P0C2J1 1755 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W TY1B-JR1P47098 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-ML2Q03434 1755 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms