RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 TMEM106CQ9BVX2 250 aa17.28■□□□□ 0.36
CASC19-229ENST00000641418 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
CASC19-229ENST00000641418 TIE1P35590 1138 aa17.28■□□□□ 0.36
CASC19-229ENST00000641418 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
CASC19-229ENST00000641418 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
CASC19-229ENST00000641418 GOLGA2Q08379 1002 aa17.27■□□□□ 0.35
CASC19-229ENST00000641418 NEO1Q92859 1461 aa17.27■□□□□ 0.35
CASC19-229ENST00000641418 SOX12O15370 315 aa17.24■□□□□ 0.35
CASC19-229ENST00000641418 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
CASC19-229ENST00000641418 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
CASC19-229ENST00000641418 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
CASC19-229ENST00000641418 EFCAB3Q8N7B9 438 aa17.2■□□□□ 0.34
CASC19-229ENST00000641418 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
CASC19-229ENST00000641418 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
CASC19-229ENST00000641418 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
CASC19-229ENST00000641418 NLRP6P59044 892 aa17.16■□□□□ 0.34
CASC19-229ENST00000641418 MKRN3Q13064 507 aaKnown RBP17.16■□□□□ 0.34
CASC19-229ENST00000641418 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
CASC19-229ENST00000641418 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
CASC19-229ENST00000641418 TTLL13PA6NNM8 815 aa17.15■□□□□ 0.34
CASC19-229ENST00000641418 FANCAO15360 1455 aa17.15■□□□□ 0.34
CASC19-229ENST00000641418 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
CASC19-229ENST00000641418 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
CASC19-229ENST00000641418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
CASC19-229ENST00000641418 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
CASC19-229ENST00000641418 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
CASC19-229ENST00000641418 MFRPQ9BY79 579 aa17.14■□□□□ 0.33
CASC19-229ENST00000641418 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
CASC19-229ENST00000641418 GABBR2O75899 941 aa17.12■□□□□ 0.33
CASC19-229ENST00000641418 PLCH2O75038 1416 aa17.11■□□□□ 0.33
CASC19-229ENST00000641418 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
CASC19-229ENST00000641418 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
CASC19-229ENST00000641418 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
CASC19-229ENST00000641418 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
CASC19-229ENST00000641418 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
CASC19-229ENST00000641418 PTPRMP28827 1452 aa17.06■□□□□ 0.32
CASC19-229ENST00000641418 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
CASC19-229ENST00000641418 TRIM35Q9UPQ4 493 aa17.06■□□□□ 0.32
CASC19-229ENST00000641418 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
CASC19-229ENST00000641418 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
CASC19-229ENST00000641418 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
CASC19-229ENST00000641418 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
CASC19-229ENST00000641418 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
CASC19-229ENST00000641418 CLIP1P30622 1438 aa17.02■□□□□ 0.32
CASC19-229ENST00000641418 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
CASC19-229ENST00000641418 ASTLQ6HA08 431 aaPredicted RBP17.02■□□□□ 0.32
CASC19-229ENST00000641418 ILDR1Q86SU0 546 aaPredicted RBP17.02■□□□□ 0.32
CASC19-229ENST00000641418 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.31
CASC19-229ENST00000641418 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.31
CASC19-229ENST00000641418 YEATS2Q9ULM3 1422 aa17.02■□□□□ 0.31
CASC19-229ENST00000641418 DCBLD2Q96PD2 775 aa17.02■□□□□ 0.31
CASC19-229ENST00000641418 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
CASC19-229ENST00000641418 ZMYM4Q5VZL5 1548 aa17■□□□□ 0.31
CASC19-229ENST00000641418 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
CASC19-229ENST00000641418 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
CASC19-229ENST00000641418 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
CASC19-229ENST00000641418 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
CASC19-229ENST00000641418 MLECQ14165 292 aa16.98■□□□□ 0.31
CASC19-229ENST00000641418 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
CASC19-229ENST00000641418 BCORL1Q5H9F3 1711 aa16.98■□□□□ 0.31
CASC19-229ENST00000641418 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
CASC19-229ENST00000641418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.317e-8■□□□□ 10.2
CASC19-229ENST00000641418 KIF14Q15058 1648 aa16.95■□□□□ 0.3
CASC19-229ENST00000641418 IER5LQ5T953 404 aa16.95■□□□□ 0.3
CASC19-229ENST00000641418 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
CASC19-229ENST00000641418 ATP10AO60312 1499 aa16.94■□□□□ 0.3
CASC19-229ENST00000641418 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
CASC19-229ENST00000641418 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
CASC19-229ENST00000641418 ARHGAP5Q13017 1502 aa16.94■□□□□ 0.3
CASC19-229ENST00000641418 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
CASC19-229ENST00000641418 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
CASC19-229ENST00000641418 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
CASC19-229ENST00000641418 MS4A4AQ96JQ5 239 aa16.9■□□□□ 0.3
CASC19-229ENST00000641418 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
CASC19-229ENST00000641418 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
CASC19-229ENST00000641418 PPP1R37O75864 691 aa16.89■□□□□ 0.29
CASC19-229ENST00000641418 MYO5CQ9NQX4 1742 aa16.88■□□□□ 0.29
CASC19-229ENST00000641418 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
CASC19-229ENST00000641418 HSPA2P54652 639 aa16.86■□□□□ 0.29
CASC19-229ENST00000641418 TRAPPC8Q9Y2L5 1435 aa16.85■□□□□ 0.29
CASC19-229ENST00000641418 OCEL1Q9H607 264 aa16.85■□□□□ 0.29
CASC19-229ENST00000641418 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
CASC19-229ENST00000641418 MLH3Q9UHC1 1453 aa16.85■□□□□ 0.29
CASC19-229ENST00000641418 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
CASC19-229ENST00000641418 KDM5CP41229 1560 aa16.84■□□□□ 0.29
CASC19-229ENST00000641418 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
CASC19-229ENST00000641418 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
CASC19-229ENST00000641418 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.29
CASC19-229ENST00000641418 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
CASC19-229ENST00000641418 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
CASC19-229ENST00000641418 SLC39A7Q92504 469 aa16.81■□□□□ 0.28
CASC19-229ENST00000641418 PLCG2P16885 1265 aa16.8■□□□□ 0.28
CASC19-229ENST00000641418 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
CASC19-229ENST00000641418 ABCC1P33527 1531 aa16.8■□□□□ 0.28
CASC19-229ENST00000641418 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
CASC19-229ENST00000641418 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
CASC19-229ENST00000641418 FBXO41Q8TF61 875 aa16.79■□□□□ 0.28
CASC19-229ENST00000641418 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
CASC19-229ENST00000641418 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
CASC19-229ENST00000641418 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms