RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ABCA9Q8IUA7 1624 aa25.65■■□□□ 1.7
CTSD-212ENST00000637815 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
CTSD-212ENST00000637815 ATP10AO60312 1499 aa25.65■■□□□ 1.7
CTSD-212ENST00000637815 TRPM1Q7Z4N2 1603 aa25.63■■□□□ 1.69
CTSD-212ENST00000637815 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
CTSD-212ENST00000637815 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
CTSD-212ENST00000637815 DCAF11Q8TEB1 546 aa25.59■■□□□ 1.69
CTSD-212ENST00000637815 CARD11Q9BXL7 1154 aa25.58■■□□□ 1.69
CTSD-212ENST00000637815 PRAG1Q86YV5 1406 aa25.58■■□□□ 1.69
CTSD-212ENST00000637815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.58■■□□□ 1.68
CTSD-212ENST00000637815 DEPDC5O75140 1603 aa25.57■■□□□ 1.68
CTSD-212ENST00000637815 INO80Q9ULG1 1556 aaPredicted RBP25.56■■□□□ 1.68
CTSD-212ENST00000637815 DHX29Q7Z478 1369 aaKnown RBP25.56■■□□□ 1.68
CTSD-212ENST00000637815 LAMC1P11047 1609 aa25.56■■□□□ 1.68
CTSD-212ENST00000637815 A2MP01023 1474 aa25.55■■□□□ 1.68
CTSD-212ENST00000637815 KDM2AQ9Y2K7 1162 aa25.55■■□□□ 1.68
CTSD-212ENST00000637815 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
CTSD-212ENST00000637815 FANCAO15360 1455 aa25.54■■□□□ 1.68
CTSD-212ENST00000637815 ROCK2O75116 1388 aaKnown RBP25.54■■□□□ 1.68
CTSD-212ENST00000637815 E9PCH4 1651 aa25.53■■□□□ 1.68
CTSD-212ENST00000637815 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
CTSD-212ENST00000637815 CCDC184Q52MB2 194 aa25.51■■□□□ 1.67
CTSD-212ENST00000637815 ATP7AQ04656 1500 aa25.51■■□□□ 1.67
CTSD-212ENST00000637815 HNRNPUQ00839 825 aaKnown RBP eCLIP25.5■■□□□ 1.67
CTSD-212ENST00000637815 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
CTSD-212ENST00000637815 GPRASP1Q5JY77 1395 aa25.49■■□□□ 1.67
CTSD-212ENST00000637815 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
CTSD-212ENST00000637815 SPHKAPQ2M3C7 1700 aa25.47■■□□□ 1.67
CTSD-212ENST00000637815 TET3O43151 1660 aa25.46■■□□□ 1.67
CTSD-212ENST00000637815 ST20-MTHFSA0A0A6YYL1 179 aa25.46■■□□□ 1.67
CTSD-212ENST00000637815 PRDM15P57071 1507 aaPredicted RBP25.45■■□□□ 1.66
CTSD-212ENST00000637815 MRS2Q9HD23 443 aa25.45■■□□□ 1.66
CTSD-212ENST00000637815 ADGRL1O94910 1474 aa25.45■■□□□ 1.66
CTSD-212ENST00000637815 VWDEQ8N2E2 1590 aa25.44■■□□□ 1.66
CTSD-212ENST00000637815 CEP152O94986 1710 aa25.44■■□□□ 1.66
CTSD-212ENST00000637815 TRPM2O94759 1503 aa25.44■■□□□ 1.66
CTSD-212ENST00000637815 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
CTSD-212ENST00000637815 RGL3Q3MIN7 710 aa25.42■■□□□ 1.66
CTSD-212ENST00000637815 FKBP8Q14318 412 aa25.42■■□□□ 1.66
CTSD-212ENST00000637815 SCAPERQ9BY12 1400 aa25.4■■□□□ 1.66
CTSD-212ENST00000637815 PTPRTO14522 1441 aa25.4■■□□□ 1.66
CTSD-212ENST00000637815 NEFLP07196 543 aa25.39■■□□□ 1.65
CTSD-212ENST00000637815 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.65
CTSD-212ENST00000637815 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
CTSD-212ENST00000637815 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
CTSD-212ENST00000637815 KIDINS220Q9ULH0 1771 aa25.37■■□□□ 1.65
CTSD-212ENST00000637815 CLTCL1P53675 1640 aa25.36■■□□□ 1.65
CTSD-212ENST00000637815 NBPF1Q3BBV0 1214 aa25.36■■□□□ 1.65
CTSD-212ENST00000637815 FAM9BQ8IZU0 186 aa25.35■■□□□ 1.65
CTSD-212ENST00000637815 MADDQ8WXG6 1647 aa25.35■■□□□ 1.65
CTSD-212ENST00000637815 CFAP74Q9C0B2 1584 aa25.35■■□□□ 1.65
CTSD-212ENST00000637815 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.64
CTSD-212ENST00000637815 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
CTSD-212ENST00000637815 KANK1Q14678 1352 aa25.32■■□□□ 1.64
CTSD-212ENST00000637815 NEURL4Q96JN8 1562 aa25.32■■□□□ 1.64
CTSD-212ENST00000637815 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
CTSD-212ENST00000637815 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
CTSD-212ENST00000637815 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
CTSD-212ENST00000637815 NPM1P06748 294 aaKnown RBP eCLIP25.27■■□□□ 1.64
CTSD-212ENST00000637815 STAC3Q96MF2 364 aa25.26■■□□□ 1.63
CTSD-212ENST00000637815 TESK2Q96S53 571 aa25.25■■□□□ 1.63
CTSD-212ENST00000637815 KIF3BO15066 747 aa25.25■■□□□ 1.63
CTSD-212ENST00000637815 BCANQ96GW7 911 aa25.25■■□□□ 1.63
CTSD-212ENST00000637815 EFCAB6Q5THR3 1501 aa25.24■■□□□ 1.63
CTSD-212ENST00000637815 KIAA1210Q9ULL0 1709 aa25.23■■□□□ 1.63
CTSD-212ENST00000637815 CD109Q6YHK3 1445 aa25.22■■□□□ 1.63
CTSD-212ENST00000637815 LMTK2Q8IWU2 1503 aa25.22■■□□□ 1.63
CTSD-212ENST00000637815 KIF1BO60333 1816 aa25.21■■□□□ 1.63
CTSD-212ENST00000637815 RALBP1Q15311 655 aa25.21■■□□□ 1.63
CTSD-212ENST00000637815 DISP3Q9P2K9 1392 aa25.21■■□□□ 1.63
CTSD-212ENST00000637815 POGZQ7Z3K3 1410 aa25.21■■□□□ 1.63
CTSD-212ENST00000637815 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
CTSD-212ENST00000637815 BRD4O60885 1362 aaPredicted RBP25.19■■□□□ 1.62
CTSD-212ENST00000637815 MYT1LQ9UL68 1186 aa25.19■■□□□ 1.62
CTSD-212ENST00000637815 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
CTSD-212ENST00000637815 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
CTSD-212ENST00000637815 MLH3Q9UHC1 1453 aa25.18■■□□□ 1.62
CTSD-212ENST00000637815 PNISRQ8TF01 805 aaKnown RBP25.17■■□□□ 1.62
CTSD-212ENST00000637815 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
CTSD-212ENST00000637815 CNGB1Q14028 1251 aaPredicted RBP25.16■■□□□ 1.62
CTSD-212ENST00000637815 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
CTSD-212ENST00000637815 FRMPD1Q5SYB0 1578 aa25.15■■□□□ 1.62
CTSD-212ENST00000637815 PER1O15534 1290 aaPredicted RBP25.14■■□□□ 1.62
CTSD-212ENST00000637815 TMC1Q8TDI8 760 aa25.14■■□□□ 1.62
CTSD-212ENST00000637815 LRPPRCP42704 1394 aaKnown RBP25.14■■□□□ 1.62
CTSD-212ENST00000637815 TMF1P82094 1093 aa25.13■■□□□ 1.61
CTSD-212ENST00000637815 WASHC2CQ9Y4E1 1318 aa25.13■■□□□ 1.61
CTSD-212ENST00000637815 MAP3K4Q9Y6R4 1608 aa25.13■■□□□ 1.61
CTSD-212ENST00000637815 MYOM2P54296 1465 aa25.13■■□□□ 1.61
CTSD-212ENST00000637815 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
CTSD-212ENST00000637815 UGGT1Q9NYU2 1555 aa25.12■■□□□ 1.61
CTSD-212ENST00000637815 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
CTSD-212ENST00000637815 MROH2AA6NES4 1674 aa25.11■■□□□ 1.61
CTSD-212ENST00000637815 NEO1Q92859 1461 aa25.11■■□□□ 1.61
CTSD-212ENST00000637815 TSHZ2Q9NRE2 1034 aa25.1■■□□□ 1.61
CTSD-212ENST00000637815 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
CTSD-212ENST00000637815 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
CTSD-212ENST00000637815 NLRP13Q86W25 1043 aa25.06■■□□□ 1.6
CTSD-212ENST00000637815 ADGRB3O60242 1522 aa25.05■■□□□ 1.6
CTSD-212ENST00000637815 SYNMO15061 1565 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms