RNA–Protein interactions for RNA: ENST00000627604.1

POLR1D-210, Transcript of RNA polymerase I and III subunit D, human

TSL 4

Gene POLR1D, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1D-210	ENST00000627604	MROH1	Q8NDA8	1641 aa		33.79	■■■■□ 3
POLR1D-210	ENST00000627604	C3	P01024	1663 aa		33.77	■■■■□ 3
POLR1D-210	ENST00000627604	CLTC	Q00610	1675 aa	Known RBP	33.77	■■■■□ 3
POLR1D-210	ENST00000627604	ZC3H13	Q5T200	1668 aa	Known RBP	33.76	■■■□□ 2.99
POLR1D-210	ENST00000627604	PRDM15	P57071	1507 aa	Predicted RBP	33.74	■■■□□ 2.99
POLR1D-210	ENST00000627604	KIF3B	O15066	747 aa		33.73	■■■□□ 2.99
POLR1D-210	ENST00000627604	CHIC2	Q9UKJ5	165 aa		33.73	■■■□□ 2.99
POLR1D-210	ENST00000627604	KDM5D	Q9BY66	1539 aa		33.73	■■■□□ 2.99
POLR1D-210	ENST00000627604	RRP7BP	Q9NSQ0	103 aa		33.72	■■■□□ 2.99
POLR1D-210	ENST00000627604	SETD1B	Q9UPS6	1966 aa	Known RBP	33.67	■■■□□ 2.98
POLR1D-210	ENST00000627604	GGT6	Q6P531	493 aa		33.67	■■■□□ 2.98
POLR1D-210	ENST00000627604	GCC2	Q8IWJ2	1684 aa		33.66	■■■□□ 2.98
POLR1D-210	ENST00000627604	ANKRD50	Q9ULJ7	1429 aa		33.66	■■■□□ 2.98
POLR1D-210	ENST00000627604	VWDE	Q8N2E2	1590 aa		33.64	■■■□□ 2.98
POLR1D-210	ENST00000627604	ABCC3	O15438	1527 aa		33.63	■■■□□ 2.97
POLR1D-210	ENST00000627604	ESF1	Q9H501	851 aa	Known RBP	33.62	■■■□□ 2.97
POLR1D-210	ENST00000627604	CEP152	O94986	1710 aa		33.62	■■■□□ 2.97
POLR1D-210	ENST00000627604	UNC13B	O14795	1591 aa		33.61	■■■□□ 2.97
POLR1D-210	ENST00000627604	ZMYM3	Q14202	1370 aa		33.59	■■■□□ 2.97
POLR1D-210	ENST00000627604	PREX1	Q8TCU6	1659 aa		33.58	■■■□□ 2.97
POLR1D-210	ENST00000627604	NPAT	Q14207	1427 aa		33.57	■■■□□ 2.96
POLR1D-210	ENST00000627604	CAMSAP1	Q5T5Y3	1602 aa		33.57	■■■□□ 2.96
POLR1D-210	ENST00000627604	LMTK2	Q8IWU2	1503 aa		33.56	■■■□□ 2.96
POLR1D-210	ENST00000627604	ITGAE	P38570	1179 aa		33.54	■■■□□ 2.96
POLR1D-210	ENST00000627604	PZP	P20742	1482 aa		33.54	■■■□□ 2.96
POLR1D-210	ENST00000627604	HFM1	A2PYH4	1435 aa		33.53	■■■□□ 2.96
POLR1D-210	ENST00000627604	NAIP	Q13075	1403 aa		33.52	■■■□□ 2.96
POLR1D-210	ENST00000627604	WASHC2C	Q9Y4E1	1318 aa		33.51	■■■□□ 2.95
POLR1D-210	ENST00000627604	PLPPR3	Q6T4P5	718 aa		33.49	■■■□□ 2.95
POLR1D-210	ENST00000627604	CEBPA	P49715	358 aa	Predicted RBP	33.48	■■■□□ 2.95
POLR1D-210	ENST00000627604	ARHGAP31	Q2M1Z3	1444 aa		33.47	■■■□□ 2.95
POLR1D-210	ENST00000627604	KANK1	Q14678	1352 aa		33.47	■■■□□ 2.95
POLR1D-210	ENST00000627604	IQGAP3	Q86VI3	1631 aa		33.46	■■■□□ 2.95
POLR1D-210	ENST00000627604	LMTK3	Q96Q04	1460 aa		33.46	■■■□□ 2.95
POLR1D-210	ENST00000627604	TET3	O43151	1660 aa		33.44	■■■□□ 2.94
POLR1D-210	ENST00000627604	ZNF142	P52746	1687 aa	Predicted RBP	33.43	■■■□□ 2.94
POLR1D-210	ENST00000627604	EFCAB6	Q5THR3	1501 aa		33.43	■■■□□ 2.94
POLR1D-210	ENST00000627604	SPATA31D1	Q6ZQQ2	1576 aa		33.43	■■■□□ 2.94
POLR1D-210	ENST00000627604	MYO3A	Q8NEV4	1616 aa		33.42	■■■□□ 2.94
POLR1D-210	ENST00000627604	UHRF1BP1	Q6BDS2	1440 aa		33.37	■■■□□ 2.93
POLR1D-210	ENST00000627604	ERVK-7	P63135	1459 aa		33.35	■■■□□ 2.93
POLR1D-210	ENST00000627604	RPRD2	Q5VT52	1461 aa	Known RBP	33.34	■■■□□ 2.93
POLR1D-210	ENST00000627604	CFAP65	Q6ZU64	1925 aa	Known RBP	33.34	■■■□□ 2.93
POLR1D-210	ENST00000627604	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.32	■■■□□ 2.92	5e-7	■■■□□ 18.6
POLR1D-210	ENST00000627604	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.3	■■■□□ 2.92
POLR1D-210	ENST00000627604	ILDR1	Q86SU0	546 aa	Predicted RBP	33.29	■■■□□ 2.92
POLR1D-210	ENST00000627604	TNR	Q92752	1358 aa		33.28	■■■□□ 2.92
POLR1D-210	ENST00000627604		E9PCH4	1651 aa		33.28	■■■□□ 2.92
POLR1D-210	ENST00000627604	NLRP1	Q9C000	1473 aa		33.27	■■■□□ 2.92
POLR1D-210	ENST00000627604	HSPA2	P54652	639 aa		33.27	■■■□□ 2.92
POLR1D-210	ENST00000627604	NUP155	O75694	1391 aa		33.24	■■■□□ 2.91
POLR1D-210	ENST00000627604	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.24	■■■□□ 2.91
POLR1D-210	ENST00000627604	A2ML1	A8K2U0	1454 aa		33.24	■■■□□ 2.91
POLR1D-210	ENST00000627604	NOS1	P29475	1434 aa		33.23	■■■□□ 2.91
POLR1D-210	ENST00000627604	SYNM	O15061	1565 aa		33.2	■■■□□ 2.91
POLR1D-210	ENST00000627604	ACIN1	Q9UKV3	1341 aa	Known RBP	33.19	■■■□□ 2.9
POLR1D-210	ENST00000627604	KDM5A	P29375	1690 aa	Known RBP	33.19	■■■□□ 2.9
POLR1D-210	ENST00000627604	SETD5	Q9C0A6	1442 aa		33.18	■■■□□ 2.9
POLR1D-210	ENST00000627604	STRC	Q7RTU9	1775 aa		33.13	■■■□□ 2.89
POLR1D-210	ENST00000627604	UBR1	Q8IWV7	1749 aa		33.13	■■■□□ 2.89
POLR1D-210	ENST00000627604	PIK3C2B	O00750	1634 aa		33.13	■■■□□ 2.89
POLR1D-210	ENST00000627604	PLA2R1	Q13018	1463 aa		33.12	■■■□□ 2.89
POLR1D-210	ENST00000627604	SPHKAP	Q2M3C7	1700 aa		33.12	■■■□□ 2.89
POLR1D-210	ENST00000627604	UGGT1	Q9NYU2	1555 aa		33.09	■■■□□ 2.89
POLR1D-210	ENST00000627604	RAB3GAP2	Q9H2M9	1393 aa		33.05	■■■□□ 2.88
POLR1D-210	ENST00000627604	PTPRT	O14522	1441 aa		33.04	■■■□□ 2.88
POLR1D-210	ENST00000627604	POLR1A	O95602	1720 aa	Predicted RBP	33.03	■■■□□ 2.88
POLR1D-210	ENST00000627604	HRC	P23327	699 aa		33.03	■■■□□ 2.88
POLR1D-210	ENST00000627604	SLC52A1	Q9NWF4	448 aa		33	■■■□□ 2.87
POLR1D-210	ENST00000627604	ADGRB3	O60242	1522 aa		33	■■■□□ 2.87
POLR1D-210	ENST00000627604	TRPM2	O94759	1503 aa		32.99	■■■□□ 2.87
POLR1D-210	ENST00000627604	TRIM52	Q96A61	297 aa		32.98	■■■□□ 2.87
POLR1D-210	ENST00000627604	SLIT1	O75093	1534 aa		32.97	■■■□□ 2.87
POLR1D-210	ENST00000627604	ARHGAP23	Q9P227	1491 aa		32.95	■■■□□ 2.87
POLR1D-210	ENST00000627604	FBXO41	Q8TF61	875 aa		32.95	■■■□□ 2.87
POLR1D-210	ENST00000627604	MYO5B	Q9ULV0	1848 aa		32.95	■■■□□ 2.86
POLR1D-210	ENST00000627604	TMEM131L	A2VDJ0	1609 aa		32.95	■■■□□ 2.86
POLR1D-210	ENST00000627604	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.94	■■■□□ 2.86
POLR1D-210	ENST00000627604	IDI1	Q13907	227 aa		32.93	■■■□□ 2.86
POLR1D-210	ENST00000627604	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.92	■■■□□ 2.86
POLR1D-210	ENST00000627604	DMRT2	Q9Y5R5	561 aa		32.91	■■■□□ 2.86
POLR1D-210	ENST00000627604	NEURL4	Q96JN8	1562 aa		32.91	■■■□□ 2.86
POLR1D-210	ENST00000627604	CLTCL1	P53675	1640 aa		32.89	■■■□□ 2.86
POLR1D-210	ENST00000627604	PKD2	Q13563	968 aa		32.89	■■■□□ 2.86
POLR1D-210	ENST00000627604	MED14	O60244	1454 aa		32.86	■■■□□ 2.85
POLR1D-210	ENST00000627604	TRIM26	Q12899	539 aa	Predicted RBP	32.86	■■■□□ 2.85
POLR1D-210	ENST00000627604	MPHOSPH9	Q99550	1183 aa		32.86	■■■□□ 2.85
POLR1D-210	ENST00000627604	KIF1B	O60333	1816 aa		32.86	■■■□□ 2.85
POLR1D-210	ENST00000627604	TMEM2	Q9UHN6	1383 aa		32.82	■■■□□ 2.84
POLR1D-210	ENST00000627604	SCAF11	Q99590	1463 aa	Known RBP	32.79	■■■□□ 2.84
POLR1D-210	ENST00000627604	IQGAP1	P46940	1657 aa		32.78	■■■□□ 2.84
POLR1D-210	ENST00000627604	CERK	Q8TCT0	537 aa		32.78	■■■□□ 2.84
POLR1D-210	ENST00000627604	ANKLE2	Q86XL3	938 aa		32.77	■■■□□ 2.84
POLR1D-210	ENST00000627604	ZFYVE9	O95405	1425 aa		32.77	■■■□□ 2.84
POLR1D-210	ENST00000627604	NCKAP5L	Q9HCH0	1330 aa		32.76	■■■□□ 2.83
POLR1D-210	ENST00000627604	STAG3	Q9UJ98	1225 aa		32.74	■■■□□ 2.83
POLR1D-210	ENST00000627604	NPHP4	O75161	1426 aa	Predicted RBP	32.71	■■■□□ 2.83
POLR1D-210	ENST00000627604	LTK	P29376	864 aa		32.67	■■■□□ 2.82
POLR1D-210	ENST00000627604	CCDC144A	A2RUR9	1427 aa		32.67	■■■□□ 2.82
POLR1D-210	ENST00000627604	RIMS2	Q9UQ26	1411 aa		32.67	■■■□□ 2.82

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