RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 LRRC9Q6ZRR7 1453 aa14.13□□□□□ -0.15
CHD2-206ENST00000625990 GGT6Q6P531 493 aa14.13□□□□□ -0.15
CHD2-206ENST00000625990 CLTCQ00610 1675 aaKnown RBP14.13□□□□□ -0.15
CHD2-206ENST00000625990 PLEKHH2Q8IVE3 1493 aa14.12□□□□□ -0.15
CHD2-206ENST00000625990 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
CHD2-206ENST00000625990 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
CHD2-206ENST00000625990 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
CHD2-206ENST00000625990 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
CHD2-206ENST00000625990 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
CHD2-206ENST00000625990 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
CHD2-206ENST00000625990 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
CHD2-206ENST00000625990 KIF3BO15066 747 aa14.04□□□□□ -0.16
CHD2-206ENST00000625990 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
CHD2-206ENST00000625990 FBXO41Q8TF61 875 aa14.03□□□□□ -0.16
CHD2-206ENST00000625990 DHX29Q7Z478 1369 aaKnown RBP14.03□□□□□ -0.16
CHD2-206ENST00000625990 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
CHD2-206ENST00000625990 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
CHD2-206ENST00000625990 MROH2AA6NES4 1674 aa14.02□□□□□ -0.16
CHD2-206ENST00000625990 MYO3AQ8NEV4 1616 aa14.02□□□□□ -0.16
CHD2-206ENST00000625990 NCKAP5LQ9HCH0 1330 aa14.02□□□□□ -0.17
CHD2-206ENST00000625990 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
CHD2-206ENST00000625990 RTEL1-TNFRSF6BF6WH68 1400 aa14.01□□□□□ -0.17
CHD2-206ENST00000625990 MYOM3Q5VTT5 1437 aa14.01□□□□□ -0.17
CHD2-206ENST00000625990 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
CHD2-206ENST00000625990 CERKQ8TCT0 537 aa14□□□□□ -0.17
CHD2-206ENST00000625990 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
CHD2-206ENST00000625990 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
CHD2-206ENST00000625990 NPATQ14207 1427 aa13.98□□□□□ -0.17
CHD2-206ENST00000625990 POLA2Q14181 598 aa13.97□□□□□ -0.17
CHD2-206ENST00000625990 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
CHD2-206ENST00000625990 TSPY4P0CV99 314 aa13.96□□□□□ -0.17
CHD2-206ENST00000625990 TSPY10P0CW01 314 aa13.96□□□□□ -0.17
CHD2-206ENST00000625990 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
CHD2-206ENST00000625990 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.18
CHD2-206ENST00000625990 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 ABCB7O75027 752 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 DSG3P32926 999 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 ABCC5O15440 1437 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
CHD2-206ENST00000625990 WASHC2CQ9Y4E1 1318 aa13.94□□□□□ -0.18
CHD2-206ENST00000625990 RRP7BPQ9NSQ0 103 aa13.94□□□□□ -0.18
CHD2-206ENST00000625990 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
CHD2-206ENST00000625990 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
CHD2-206ENST00000625990 ZNF335Q9H4Z2 1342 aaPredicted RBP13.93□□□□□ -0.18
CHD2-206ENST00000625990 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
CHD2-206ENST00000625990 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
CHD2-206ENST00000625990 ABCC3O15438 1527 aa13.92□□□□□ -0.18
CHD2-206ENST00000625990 DNMT1P26358 1616 aaKnown RBP13.92□□□□□ -0.18
CHD2-206ENST00000625990 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
CHD2-206ENST00000625990 TNRQ92752 1358 aa13.92□□□□□ -0.18
CHD2-206ENST00000625990 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
CHD2-206ENST00000625990 PTPRTO14522 1441 aa13.91□□□□□ -0.18
CHD2-206ENST00000625990 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
CHD2-206ENST00000625990 CEP152O94986 1710 aa13.91□□□□□ -0.18
CHD2-206ENST00000625990 PZPP20742 1482 aa13.91□□□□□ -0.18
CHD2-206ENST00000625990 DAPK1P53355 1430 aa13.9□□□□□ -0.18
CHD2-206ENST00000625990 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
CHD2-206ENST00000625990 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
CHD2-206ENST00000625990 A2ML1A8K2U0 1454 aa13.89□□□□□ -0.19
CHD2-206ENST00000625990 KIF15Q9NS87 1388 aa13.89□□□□□ -0.19
CHD2-206ENST00000625990 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
CHD2-206ENST00000625990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD2-206ENST00000625990 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
CHD2-206ENST00000625990 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
CHD2-206ENST00000625990 DUOX2Q9NRD8 1548 aa13.86□□□□□ -0.19
CHD2-206ENST00000625990 CFAP65Q6ZU64 1925 aaKnown RBP13.85□□□□□ -0.19
CHD2-206ENST00000625990 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
CHD2-206ENST00000625990 PLA2R1Q13018 1463 aa13.85□□□□□ -0.19
CHD2-206ENST00000625990 ERVK-7P63135 1459 aa13.84□□□□□ -0.19
CHD2-206ENST00000625990 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
CHD2-206ENST00000625990 UGGT1Q9NYU2 1555 aa13.82□□□□□ -0.2
CHD2-206ENST00000625990 PRDM15P57071 1507 aaPredicted RBP13.81□□□□□ -0.2
CHD2-206ENST00000625990 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
CHD2-206ENST00000625990 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
CHD2-206ENST00000625990 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
CHD2-206ENST00000625990 PKD2Q13563 968 aa13.8□□□□□ -0.2
CHD2-206ENST00000625990 ERBINQ96RT1 1412 aa13.8□□□□□ -0.2
CHD2-206ENST00000625990 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
CHD2-206ENST00000625990 ITGAEP38570 1179 aa13.79□□□□□ -0.2
CHD2-206ENST00000625990 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
CHD2-206ENST00000625990 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
CHD2-206ENST00000625990 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
CHD2-206ENST00000625990 ANKRD30AQ9BXX3 1397 aa13.77□□□□□ -0.21
CHD2-206ENST00000625990 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
CHD2-206ENST00000625990 VWDEQ8N2E2 1590 aa13.76□□□□□ -0.21
CHD2-206ENST00000625990 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
CHD2-206ENST00000625990 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
CHD2-206ENST00000625990 LTKP29376 864 aa13.75□□□□□ -0.21
CHD2-206ENST00000625990 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
CHD2-206ENST00000625990 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
CHD2-206ENST00000625990 STRCP1A6NGW2 1772 aa13.75□□□□□ -0.21
CHD2-206ENST00000625990 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
CHD2-206ENST00000625990 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
CHD2-206ENST00000625990 SYNMO15061 1565 aa13.74□□□□□ -0.21
CHD2-206ENST00000625990 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
CHD2-206ENST00000625990 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
CHD2-206ENST00000625990 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
CHD2-206ENST00000625990 ANKRD50Q9ULJ7 1429 aa13.71□□□□□ -0.22
CHD2-206ENST00000625990 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms