RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 EFCAB2Q5VUJ9 269 aa11.45□□□□□ -0.58
SND1-IT1-201ENST00000623342 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
SND1-IT1-201ENST00000623342 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 IQGAP3Q86VI3 1631 aa11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 BCANQ96GW7 911 aa11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 ROCK2O75116 1388 aaKnown RBP11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 DHX29Q7Z478 1369 aaKnown RBP11.44□□□□□ -0.58
SND1-IT1-201ENST00000623342 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
SND1-IT1-201ENST00000623342 ABCC1P33527 1531 aa11.43□□□□□ -0.58
SND1-IT1-201ENST00000623342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.58
SND1-IT1-201ENST00000623342 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
SND1-IT1-201ENST00000623342 MAGI2Q86UL8 1455 aa11.42□□□□□ -0.58
SND1-IT1-201ENST00000623342 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
SND1-IT1-201ENST00000623342 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
SND1-IT1-201ENST00000623342 PRAG1Q86YV5 1406 aa11.4□□□□□ -0.58
SND1-IT1-201ENST00000623342 ARAP3Q8WWN8 1544 aa11.4□□□□□ -0.58
SND1-IT1-201ENST00000623342 TRPM1Q7Z4N2 1603 aa11.4□□□□□ -0.58
SND1-IT1-201ENST00000623342 ATP10AO60312 1499 aa11.4□□□□□ -0.59
SND1-IT1-201ENST00000623342 ST20-MTHFSA0A0A6YYL1 179 aa11.4□□□□□ -0.59
SND1-IT1-201ENST00000623342 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
SND1-IT1-201ENST00000623342 ZBED9Q6R2W3 1325 aa11.39□□□□□ -0.59
SND1-IT1-201ENST00000623342 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
SND1-IT1-201ENST00000623342 TSHZ2Q9NRE2 1034 aa11.38□□□□□ -0.59
SND1-IT1-201ENST00000623342 A2MP01023 1474 aa11.38□□□□□ -0.59
SND1-IT1-201ENST00000623342 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
SND1-IT1-201ENST00000623342 RGL3Q3MIN7 710 aa11.37□□□□□ -0.59
SND1-IT1-201ENST00000623342 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
SND1-IT1-201ENST00000623342 WDR7Q9Y4E6 1490 aa11.36□□□□□ -0.59
SND1-IT1-201ENST00000623342 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
SND1-IT1-201ENST00000623342 LAMC1P11047 1609 aa11.36□□□□□ -0.59
SND1-IT1-201ENST00000623342 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
SND1-IT1-201ENST00000623342 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
SND1-IT1-201ENST00000623342 E9PCH4 1651 aa11.34□□□□□ -0.59
SND1-IT1-201ENST00000623342 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
SND1-IT1-201ENST00000623342 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
SND1-IT1-201ENST00000623342 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
SND1-IT1-201ENST00000623342 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
SND1-IT1-201ENST00000623342 AFAP1Q8N556 730 aa11.33□□□□□ -0.6
SND1-IT1-201ENST00000623342 PRDM15P57071 1507 aaPredicted RBP11.33□□□□□ -0.6
SND1-IT1-201ENST00000623342 ERICH6BQ5W0A0 696 aa11.32□□□□□ -0.6
SND1-IT1-201ENST00000623342 FANCAO15360 1455 aa11.32□□□□□ -0.6
SND1-IT1-201ENST00000623342 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
SND1-IT1-201ENST00000623342 RALBP1Q15311 655 aa11.31□□□□□ -0.6
SND1-IT1-201ENST00000623342 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 ATP7AQ04656 1500 aa11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 TRPM2O94759 1503 aa11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 PNISRQ8TF01 805 aaKnown RBP11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 MYBBP1AQ9BQG0 1328 aaKnown RBP11.3□□□□□ -0.6
SND1-IT1-201ENST00000623342 COL17A1Q9UMD9 1497 aaPredicted RBP11.29□□□□□ -0.6
SND1-IT1-201ENST00000623342 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
SND1-IT1-201ENST00000623342 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
SND1-IT1-201ENST00000623342 RNF17Q9BXT8 1623 aaKnown RBP11.29□□□□□ -0.6
SND1-IT1-201ENST00000623342 PTPRTO14522 1441 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 TET3O43151 1660 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 TESK2Q96S53 571 aa11.28□□□□□ -0.6
SND1-IT1-201ENST00000623342 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.6
SND1-IT1-201ENST00000623342 KANK1Q14678 1352 aa11.27□□□□□ -0.6
SND1-IT1-201ENST00000623342 CEP152O94986 1710 aa11.27□□□□□ -0.61
SND1-IT1-201ENST00000623342 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.61
SND1-IT1-201ENST00000623342 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
SND1-IT1-201ENST00000623342 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
SND1-IT1-201ENST00000623342 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
SND1-IT1-201ENST00000623342 LRPPRCP42704 1394 aaKnown RBP11.26□□□□□ -0.61
SND1-IT1-201ENST00000623342 DISP3Q9P2K9 1392 aa11.26□□□□□ -0.61
SND1-IT1-201ENST00000623342 PARD3Q8TEW0 1356 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 TMF1P82094 1093 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 CYB5RLQ6IPT4 315 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
SND1-IT1-201ENST00000623342 KIF3BO15066 747 aa11.24□□□□□ -0.61
SND1-IT1-201ENST00000623342 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
SND1-IT1-201ENST00000623342 IQGAP1P46940 1657 aa11.23□□□□□ -0.61
SND1-IT1-201ENST00000623342 NEURL4Q96JN8 1562 aa11.22□□□□□ -0.61
SND1-IT1-201ENST00000623342 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
SND1-IT1-201ENST00000623342 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
SND1-IT1-201ENST00000623342 PANK3Q9H999 370 aa11.21□□□□□ -0.61
SND1-IT1-201ENST00000623342 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.62
SND1-IT1-201ENST00000623342 ZNF518AQ6AHZ1 1483 aa11.2□□□□□ -0.62
SND1-IT1-201ENST00000623342 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
SND1-IT1-201ENST00000623342 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
SND1-IT1-201ENST00000623342 RNF123Q5XPI4 1314 aa11.19□□□□□ -0.62
SND1-IT1-201ENST00000623342 KIAA1210Q9ULL0 1709 aa11.19□□□□□ -0.62
SND1-IT1-201ENST00000623342 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
SND1-IT1-201ENST00000623342 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
SND1-IT1-201ENST00000623342 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
SND1-IT1-201ENST00000623342 MYT1Q01538 1121 aa11.18□□□□□ -0.62
SND1-IT1-201ENST00000623342 CDCA8Q53HL2 280 aa11.18□□□□□ -0.62
SND1-IT1-201ENST00000623342 LMTK2Q8IWU2 1503 aa11.18□□□□□ -0.62
SND1-IT1-201ENST00000623342 EIF3AQ14152 1382 aaKnown RBP11.17□□□□□ -0.62
SND1-IT1-201ENST00000623342 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
SND1-IT1-201ENST00000623342 MYOM2P54296 1465 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms