RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MAST1Q9Y2H9 1570 aa37.6■■■■□ 3.61
ATXN3-253ENST00000621269 KDM5DQ9BY66 1539 aa37.59■■■■□ 3.61
ATXN3-253ENST00000621269 FAM135AQ9P2D6 1515 aa37.58■■■■□ 3.61
ATXN3-253ENST00000621269 CEP170BQ9Y4F5 1589 aaPredicted RBP37.55■■■■□ 3.6
ATXN3-253ENST00000621269 ZNF142P52746 1687 aaPredicted RBP37.54■■■■□ 3.6
ATXN3-253ENST00000621269 NCKAP5LQ9HCH0 1330 aa37.51■■■■□ 3.6
ATXN3-253ENST00000621269 FBXO31Q5XUX0 539 aaPredicted RBP37.5■■■■□ 3.59
ATXN3-253ENST00000621269 PZPP20742 1482 aa37.49■■■■□ 3.59
ATXN3-253ENST00000621269 PLA2R1Q13018 1463 aa37.47■■■■□ 3.59
ATXN3-253ENST00000621269 TNRQ92752 1358 aa37.47■■■■□ 3.59
ATXN3-253ENST00000621269 PKD2Q13563 968 aa37.47■■■■□ 3.59
ATXN3-253ENST00000621269 PTPN23Q9H3S7 1636 aa37.47■■■■□ 3.59
ATXN3-253ENST00000621269 A2ML1A8K2U0 1454 aa37.46■■■■□ 3.59
ATXN3-253ENST00000621269 RNF17Q9BXT8 1623 aaKnown RBP37.43■■■■□ 3.58
ATXN3-253ENST00000621269 EIF2AK4Q9P2K8 1649 aaKnown RBP37.43■■■■□ 3.58
ATXN3-253ENST00000621269 DUOX2Q9NRD8 1548 aa37.41■■■■□ 3.58
ATXN3-253ENST00000621269 ABCC5O15440 1437 aa37.41■■■■□ 3.58
ATXN3-253ENST00000621269 FGD6Q6ZV73 1430 aa37.41■■■■□ 3.58
ATXN3-253ENST00000621269 SHANK2Q9UPX8 1470 aa37.39■■■■□ 3.58
ATXN3-253ENST00000621269 DNMT1P26358 1616 aaKnown RBP37.38■■■■□ 3.57
ATXN3-253ENST00000621269 TCOF1Q13428 1488 aaKnown RBP37.38■■■■□ 3.57
ATXN3-253ENST00000621269 RRP7BPQ9NSQ0 103 aa37.36■■■■□ 3.57
ATXN3-253ENST00000621269 KIF15Q9NS87 1388 aa37.36■■■■□ 3.57
ATXN3-253ENST00000621269 DAPK1P53355 1430 aa37.36■■■■□ 3.57
ATXN3-253ENST00000621269 ABCC3O15438 1527 aa37.35■■■■□ 3.57
ATXN3-253ENST00000621269 CROCC2H7BZ55 1655 aa37.34■■■■□ 3.57
ATXN3-253ENST00000621269 ZC3H13Q5T200 1668 aaKnown RBP37.34■■■■□ 3.57
ATXN3-253ENST00000621269 LTBP4Q8N2S1 1624 aa37.33■■■■□ 3.57
ATXN3-253ENST00000621269 NLRP1Q9C000 1473 aa37.3■■■■□ 3.56
ATXN3-253ENST00000621269 ERBINQ96RT1 1412 aa37.28■■■■□ 3.56
ATXN3-253ENST00000621269 MROH1Q8NDA8 1641 aa37.28■■■■□ 3.56
ATXN3-253ENST00000621269 THEMISQ8N1K5 641 aaPredicted RBP37.27■■■■□ 3.56
ATXN3-253ENST00000621269 ZNF335Q9H4Z2 1342 aaPredicted RBP37.26■■■■□ 3.56
ATXN3-253ENST00000621269 CHIC2Q9UKJ5 165 aa37.25■■■■□ 3.55
ATXN3-253ENST00000621269 ANKRD30AQ9BXX3 1397 aa37.24■■■■□ 3.55
ATXN3-253ENST00000621269 UGGT1Q9NYU2 1555 aa37.22■■■■□ 3.55
ATXN3-253ENST00000621269 IQSEC2Q5JU85 1478 aa37.21■■■■□ 3.55
ATXN3-253ENST00000621269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.21■■■■□ 3.55
ATXN3-253ENST00000621269 ANKLE2Q86XL3 938 aa37.21■■■■□ 3.55
ATXN3-253ENST00000621269 SPATA31D1Q6ZQQ2 1576 aa37.21■■■■□ 3.55
ATXN3-253ENST00000621269 CEP152O94986 1710 aa37.2■■■■□ 3.55
ATXN3-253ENST00000621269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.2■■■■□ 3.55
ATXN3-253ENST00000621269 FAM50AQ14320 339 aaKnown RBP37.19■■■■□ 3.54
ATXN3-253ENST00000621269 ERVK-7P63135 1459 aa37.19■■■■□ 3.54
ATXN3-253ENST00000621269 PRDM15P57071 1507 aaPredicted RBP37.18■■■■□ 3.54
ATXN3-253ENST00000621269 POLR1AO95602 1720 aaPredicted RBP37.16■■■■□ 3.54
ATXN3-253ENST00000621269 KANK1Q14678 1352 aa37.15■■■■□ 3.54
ATXN3-253ENST00000621269 NEURL4Q96JN8 1562 aa37.12■■■■□ 3.53
ATXN3-253ENST00000621269 ARHGAP31Q2M1Z3 1444 aa37.1■■■■□ 3.53
ATXN3-253ENST00000621269 DEPDC5O75140 1603 aa37.09■■■■□ 3.53
ATXN3-253ENST00000621269 ADGRL2O95490 1459 aa37.06■■■■□ 3.52
ATXN3-253ENST00000621269 NPHP4O75161 1426 aaPredicted RBP37.04■■■■□ 3.52
ATXN3-253ENST00000621269 MED14O60244 1454 aa37.02■■■■□ 3.52
ATXN3-253ENST00000621269 CFAP65Q6ZU64 1925 aaKnown RBP37.02■■■■□ 3.52
ATXN3-253ENST00000621269 UBAP1LF5GYI3 381 aa36.99■■■■□ 3.51
ATXN3-253ENST00000621269 LMTK2Q8IWU2 1503 aa36.96■■■■□ 3.51
ATXN3-253ENST00000621269 UBR1Q8IWV7 1749 aa36.95■■■■□ 3.51
ATXN3-253ENST00000621269 VWDEQ8N2E2 1590 aa36.95■■■■□ 3.51
ATXN3-253ENST00000621269 CPS1P31327 1500 aa36.95■■■■□ 3.5
ATXN3-253ENST00000621269 ANKRD50Q9ULJ7 1429 aa36.93■■■■□ 3.5
ATXN3-253ENST00000621269 IQGAP1P46940 1657 aa36.93■■■■□ 3.5
ATXN3-253ENST00000621269 STAG3Q9UJ98 1225 aa36.9■■■■□ 3.5
ATXN3-253ENST00000621269 TXNDC2Q86VQ3 553 aa36.87■■■■□ 3.49
ATXN3-253ENST00000621269 PPARGC1BQ86YN6 1023 aaKnown RBP36.86■■■■□ 3.49
ATXN3-253ENST00000621269 SCAF11Q99590 1463 aaKnown RBP36.86■■■■□ 3.49
ATXN3-253ENST00000621269 EID1Q9Y6B2 187 aa36.85■■■■□ 3.49
ATXN3-253ENST00000621269 EFCAB6Q5THR3 1501 aa36.85■■■■□ 3.49
ATXN3-253ENST00000621269 PIK3C2BO00750 1634 aa36.84■■■■□ 3.49
ATXN3-253ENST00000621269 SLIT1O75093 1534 aa36.84■■■■□ 3.49
ATXN3-253ENST00000621269 ARHGAP23Q9P227 1491 aa36.83■■■■□ 3.49
ATXN3-253ENST00000621269 LTKP29376 864 aa36.83■■■■□ 3.49
ATXN3-253ENST00000621269 IDI1Q13907 227 aa36.82■■■■□ 3.48
ATXN3-253ENST00000621269 ROCK1Q13464 1354 aa36.79■■■■□ 3.48
ATXN3-253ENST00000621269 TMEM2Q9UHN6 1383 aa36.78■■■■□ 3.48
ATXN3-253ENST00000621269 NOS1P29475 1434 aa36.78■■■■□ 3.48
ATXN3-253ENST00000621269 TOM1O60784 492 aa36.78■■■■□ 3.48
ATXN3-253ENST00000621269 ITGAEP38570 1179 aa36.77■■■■□ 3.48
ATXN3-253ENST00000621269 SYNMO15061 1565 aa36.76■■■■□ 3.48
ATXN3-253ENST00000621269 SLC52A1Q9NWF4 448 aa36.75■■■■□ 3.47
ATXN3-253ENST00000621269 RPRD2Q5VT52 1461 aaKnown RBP36.75■■■■□ 3.47
ATXN3-253ENST00000621269 SCAF1Q9H7N4 1312 aaKnown RBP36.74■■■■□ 3.47
ATXN3-253ENST00000621269 KDM5AP29375 1690 aaKnown RBP36.74■■■■□ 3.47
ATXN3-253ENST00000621269 PIP4K2BP78356 416 aa36.72■■■■□ 3.47
ATXN3-253ENST00000621269 DISP3Q9P2K9 1392 aa36.72■■■■□ 3.47
ATXN3-253ENST00000621269 TET3O43151 1660 aa36.69■■■■□ 3.46
ATXN3-253ENST00000621269 UNC13BO14795 1591 aa36.69■■■■□ 3.46
ATXN3-253ENST00000621269 STRCP1A6NGW2 1772 aa36.66■■■■□ 3.46
ATXN3-253ENST00000621269 ADGRB3O60242 1522 aa36.65■■■■□ 3.46
ATXN3-253ENST00000621269 LRRC7Q96NW7 1537 aa36.65■■■■□ 3.46
ATXN3-253ENST00000621269 GCC2Q8IWJ2 1684 aa36.61■■■■□ 3.45
ATXN3-253ENST00000621269 NUP155O75694 1391 aa36.57■■■■□ 3.45
ATXN3-253ENST00000621269 HSPA1LP34931 641 aa36.56■■■■□ 3.44
ATXN3-253ENST00000621269 BCANQ96GW7 911 aa36.55■■■■□ 3.44
ATXN3-253ENST00000621269 IQGAP3Q86VI3 1631 aa36.55■■■■□ 3.44
ATXN3-253ENST00000621269 HDGFP51858 240 aaKnown RBP36.53■■■■□ 3.44
ATXN3-253ENST00000621269 SLC26A8Q96RN1 970 aa36.53■■■■□ 3.44
ATXN3-253ENST00000621269 E9PCH4 1651 aa36.51■■■■□ 3.44
ATXN3-253ENST00000621269 CHGAP10645 457 aaKnown RBP36.5■■■■□ 3.43
ATXN3-253ENST00000621269 ALKQ9UM73 1620 aa36.48■■■■□ 3.43
ATXN3-253ENST00000621269 PPP1R15AO75807 674 aaPredicted RBP36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms