RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 KDM5DQ9BY66 1539 aa34.95■■■■□ 3.19
ARHGEF1-223ENST00000617585 RNF17Q9BXT8 1623 aaKnown RBP34.95■■■■□ 3.18
ARHGEF1-223ENST00000617585 ZNF142P52746 1687 aaPredicted RBP34.93■■■■□ 3.18
ARHGEF1-223ENST00000617585 ABCC5O15440 1437 aa34.92■■■■□ 3.18
ARHGEF1-223ENST00000617585 DNMT1P26358 1616 aaKnown RBP34.92■■■■□ 3.18
ARHGEF1-223ENST00000617585 MYO3AQ8NEV4 1616 aa34.92■■■■□ 3.18
ARHGEF1-223ENST00000617585 DMRT2Q9Y5R5 561 aa34.89■■■■□ 3.18
ARHGEF1-223ENST00000617585 DUOX2Q9NRD8 1548 aa34.88■■■■□ 3.17
ARHGEF1-223ENST00000617585 DAPK1P53355 1430 aa34.86■■■■□ 3.17
ARHGEF1-223ENST00000617585 PZPP20742 1482 aa34.85■■■■□ 3.17
ARHGEF1-223ENST00000617585 NCOA1Q15788 1441 aa34.85■■■■□ 3.17
ARHGEF1-223ENST00000617585 WASHC2CQ9Y4E1 1318 aa34.83■■■■□ 3.17
ARHGEF1-223ENST00000617585 CEP170BQ9Y4F5 1589 aaPredicted RBP34.83■■■■□ 3.17
ARHGEF1-223ENST00000617585 ZC3H13Q5T200 1668 aaKnown RBP34.83■■■■□ 3.17
ARHGEF1-223ENST00000617585 PTPRTO14522 1441 aa34.83■■■■□ 3.17
ARHGEF1-223ENST00000617585 MROH1Q8NDA8 1641 aa34.82■■■■□ 3.16
ARHGEF1-223ENST00000617585 CAMSAP1Q5T5Y3 1602 aa34.81■■■■□ 3.16
ARHGEF1-223ENST00000617585 KIF15Q9NS87 1388 aa34.78■■■■□ 3.16
ARHGEF1-223ENST00000617585 FBXO41Q8TF61 875 aa34.78■■■■□ 3.16
ARHGEF1-223ENST00000617585 ABCC3O15438 1527 aa34.77■■■■□ 3.16
ARHGEF1-223ENST00000617585 ERBINQ96RT1 1412 aa34.77■■■■□ 3.16
ARHGEF1-223ENST00000617585 PLA2R1Q13018 1463 aa34.77■■■■□ 3.16
ARHGEF1-223ENST00000617585 A2ML1A8K2U0 1454 aa34.75■■■■□ 3.15
ARHGEF1-223ENST00000617585 FBXO31Q5XUX0 539 aaPredicted RBP34.73■■■■□ 3.15
ARHGEF1-223ENST00000617585 TNRQ92752 1358 aa34.73■■■■□ 3.15
ARHGEF1-223ENST00000617585 PRDM15P57071 1507 aaPredicted RBP34.71■■■■□ 3.15
ARHGEF1-223ENST00000617585 DEPDC5O75140 1603 aa34.7■■■■□ 3.14
ARHGEF1-223ENST00000617585 RRP7BPQ9NSQ0 103 aa34.69■■■■□ 3.14
ARHGEF1-223ENST00000617585 CEP152O94986 1710 aa34.68■■■■□ 3.14
ARHGEF1-223ENST00000617585 ADGRL2O95490 1459 aa34.68■■■■□ 3.14
ARHGEF1-223ENST00000617585 ANKRD30AQ9BXX3 1397 aa34.68■■■■□ 3.14
ARHGEF1-223ENST00000617585 CERKQ8TCT0 537 aa34.67■■■■□ 3.14
ARHGEF1-223ENST00000617585 SPATA31D1Q6ZQQ2 1576 aa34.66■■■■□ 3.14
ARHGEF1-223ENST00000617585 PKD2Q13563 968 aa34.65■■■■□ 3.14
ARHGEF1-223ENST00000617585 NLRP1Q9C000 1473 aa34.65■■■■□ 3.14
ARHGEF1-223ENST00000617585 CHIC2Q9UKJ5 165 aa34.6■■■■□ 3.13
ARHGEF1-223ENST00000617585 ARHGAP31Q2M1Z3 1444 aa34.6■■■■□ 3.13
ARHGEF1-223ENST00000617585 NCKAP5LQ9HCH0 1330 aa34.59■■■■□ 3.13
ARHGEF1-223ENST00000617585 ERVK-7P63135 1459 aa34.58■■■■□ 3.13
ARHGEF1-223ENST00000617585 LTBP4Q8N2S1 1624 aa34.57■■■■□ 3.12
ARHGEF1-223ENST00000617585 FAM50AQ14320 339 aaKnown RBP34.57■■■■□ 3.12
ARHGEF1-223ENST00000617585 VWDEQ8N2E2 1590 aa34.56■■■■□ 3.12
ARHGEF1-223ENST00000617585 CFAP65Q6ZU64 1925 aaKnown RBP34.55■■■■□ 3.12
ARHGEF1-223ENST00000617585 POLR1AO95602 1720 aaPredicted RBP34.54■■■■□ 3.12
ARHGEF1-223ENST00000617585 LMTK2Q8IWU2 1503 aa34.53■■■■□ 3.12
ARHGEF1-223ENST00000617585 UGGT1Q9NYU2 1555 aa34.53■■■■□ 3.12
ARHGEF1-223ENST00000617585 THEMISQ8N1K5 641 aaPredicted RBP34.49■■■■□ 3.11
ARHGEF1-223ENST00000617585 KANK1Q14678 1352 aa34.49■■■■□ 3.11
ARHGEF1-223ENST00000617585 NEURL4Q96JN8 1562 aa34.48■■■■□ 3.11
ARHGEF1-223ENST00000617585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.48■■■■□ 3.11
ARHGEF1-223ENST00000617585 ANKRD50Q9ULJ7 1429 aa34.45■■■■□ 3.11
ARHGEF1-223ENST00000617585 IQSEC2Q5JU85 1478 aa34.45■■■■□ 3.1
ARHGEF1-223ENST00000617585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.43■■■■□ 3.11e-6■■□□□ 14.3
ARHGEF1-223ENST00000617585 ROCK1Q13464 1354 aa34.42■■■■□ 3.1
ARHGEF1-223ENST00000617585 UBR1Q8IWV7 1749 aa34.41■■■■□ 3.1
ARHGEF1-223ENST00000617585 MED14O60244 1454 aa34.4■■■■□ 3.1
ARHGEF1-223ENST00000617585 ANKLE2Q86XL3 938 aa34.39■■■■□ 3.1
ARHGEF1-223ENST00000617585 EFCAB6Q5THR3 1501 aa34.37■■■■□ 3.09
ARHGEF1-223ENST00000617585 ZNF335Q9H4Z2 1342 aaPredicted RBP34.36■■■■□ 3.09
ARHGEF1-223ENST00000617585 KDM5AP29375 1690 aaKnown RBP34.32■■■■□ 3.08
ARHGEF1-223ENST00000617585 UNC13BO14795 1591 aa34.32■■■■□ 3.08
ARHGEF1-223ENST00000617585 PPARGC1BQ86YN6 1023 aaKnown RBP34.31■■■■□ 3.08
ARHGEF1-223ENST00000617585 NOS1P29475 1434 aa34.3■■■■□ 3.08
ARHGEF1-223ENST00000617585 ARHGAP23Q9P227 1491 aa34.29■■■■□ 3.08
ARHGEF1-223ENST00000617585 SLIT1O75093 1534 aa34.29■■■■□ 3.08
ARHGEF1-223ENST00000617585 NPHP4O75161 1426 aaPredicted RBP34.29■■■■□ 3.08
ARHGEF1-223ENST00000617585 RPRD2Q5VT52 1461 aaKnown RBP34.28■■■■□ 3.08
ARHGEF1-223ENST00000617585 PIK3C2BO00750 1634 aa34.28■■■■□ 3.08
ARHGEF1-223ENST00000617585 TET3O43151 1660 aa34.28■■■■□ 3.08
ARHGEF1-223ENST00000617585 IQGAP1P46940 1657 aa34.28■■■■□ 3.08
ARHGEF1-223ENST00000617585 SYNMO15061 1565 aa34.28■■■■□ 3.08
ARHGEF1-223ENST00000617585 RRBP1Q9P2E9 1410 aaKnown RBP34.27■■■■□ 3.08
ARHGEF1-223ENST00000617585 GCC2Q8IWJ2 1684 aa34.24■■■■□ 3.07
ARHGEF1-223ENST00000617585 CPS1P31327 1500 aa34.2■■■■□ 3.07
ARHGEF1-223ENST00000617585 SCAF11Q99590 1463 aaKnown RBP34.2■■■■□ 3.06
ARHGEF1-223ENST00000617585 IDI1Q13907 227 aa34.19■■■■□ 3.06
ARHGEF1-223ENST00000617585 IQGAP3Q86VI3 1631 aa34.19■■■■□ 3.06
ARHGEF1-223ENST00000617585 SLC52A1Q9NWF4 448 aa34.16■■■■□ 3.06
ARHGEF1-223ENST00000617585 TMEM2Q9UHN6 1383 aa34.14■■■■□ 3.06
ARHGEF1-223ENST00000617585 LTKP29376 864 aa34.14■■■■□ 3.06
ARHGEF1-223ENST00000617585 ITGAEP38570 1179 aa34.13■■■■□ 3.05
ARHGEF1-223ENST00000617585 E9PCH4 1651 aa34.12■■■■□ 3.05
ARHGEF1-223ENST00000617585 ADGRB3O60242 1522 aa34.11■■■■□ 3.05
ARHGEF1-223ENST00000617585 TXNDC2Q86VQ3 553 aa34.1■■■■□ 3.05
ARHGEF1-223ENST00000617585 STRCP1A6NGW2 1772 aa34.08■■■■□ 3.05
ARHGEF1-223ENST00000617585 STAG3Q9UJ98 1225 aa34.07■■■■□ 3.04
ARHGEF1-223ENST00000617585 EID1Q9Y6B2 187 aa34.07■■■■□ 3.04
ARHGEF1-223ENST00000617585 NUP155O75694 1391 aa34.04■■■■□ 3.04
ARHGEF1-223ENST00000617585 MYO5BQ9ULV0 1848 aa34.02■■■■□ 3.04
ARHGEF1-223ENST00000617585 TMEM131LA2VDJ0 1609 aa34.01■■■■□ 3.03
ARHGEF1-223ENST00000617585 NAIPQ13075 1403 aa33.98■■■■□ 3.03
ARHGEF1-223ENST00000617585 UBAP1LF5GYI3 381 aa33.98■■■■□ 3.03
ARHGEF1-223ENST00000617585 LRRC7Q96NW7 1537 aa33.94■■■■□ 3.02
ARHGEF1-223ENST00000617585 ZFYVE9O95405 1425 aa33.94■■■■□ 3.02
ARHGEF1-223ENST00000617585 HFM1A2PYH4 1435 aa33.9■■■■□ 3.02
ARHGEF1-223ENST00000617585 SPHKAPQ2M3C7 1700 aa33.87■■■■□ 3.01
ARHGEF1-223ENST00000617585 TOM1O60784 492 aa33.87■■■■□ 3.01
ARHGEF1-223ENST00000617585 ALKQ9UM73 1620 aa33.86■■■■□ 3.01
ARHGEF1-223ENST00000617585 XIRP1Q702N8 1843 aaKnown RBP33.85■■■■□ 3.01
ARHGEF1-223ENST00000617585 RIMS2Q9UQ26 1411 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms