RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 MYO3AQ8NEV4 1616 aa23.21■■□□□ 1.31
FDPS-221ENST00000612683 CEP170BQ9Y4F5 1589 aaPredicted RBP23.19■■□□□ 1.3
FDPS-221ENST00000612683 TNRQ92752 1358 aa23.17■■□□□ 1.3
FDPS-221ENST00000612683 ZNF142P52746 1687 aaPredicted RBP23.17■■□□□ 1.3
FDPS-221ENST00000612683 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
FDPS-221ENST00000612683 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
FDPS-221ENST00000612683 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
FDPS-221ENST00000612683 LTBP4Q8N2S1 1624 aa23.16■■□□□ 1.3
FDPS-221ENST00000612683 A2ML1A8K2U0 1454 aa23.16■■□□□ 1.3
FDPS-221ENST00000612683 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
FDPS-221ENST00000612683 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
FDPS-221ENST00000612683 PZPP20742 1482 aa23.13■■□□□ 1.29
FDPS-221ENST00000612683 TCOF1Q13428 1488 aaKnown RBP23.12■■□□□ 1.29
FDPS-221ENST00000612683 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
FDPS-221ENST00000612683 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
FDPS-221ENST00000612683 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
FDPS-221ENST00000612683 THEMISQ8N1K5 641 aaPredicted RBP23.1■■□□□ 1.29
FDPS-221ENST00000612683 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
FDPS-221ENST00000612683 IQSEC2Q5JU85 1478 aa23.06■■□□□ 1.28
FDPS-221ENST00000612683 RRP7BPQ9NSQ0 103 aa23.06■■□□□ 1.28
FDPS-221ENST00000612683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.283e-6■□□□□ 10.4
FDPS-221ENST00000612683 UBAP1LF5GYI3 381 aa23.03■■□□□ 1.28
FDPS-221ENST00000612683 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
FDPS-221ENST00000612683 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
FDPS-221ENST00000612683 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
FDPS-221ENST00000612683 ABCC5O15440 1437 aa23.01■■□□□ 1.27
FDPS-221ENST00000612683 ABCC3O15438 1527 aa23.01■■□□□ 1.27
FDPS-221ENST00000612683 KIF15Q9NS87 1388 aa23.01■■□□□ 1.27
FDPS-221ENST00000612683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.271e-9■□□□□ 9.8
FDPS-221ENST00000612683 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
FDPS-221ENST00000612683 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
FDPS-221ENST00000612683 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
FDPS-221ENST00000612683 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
FDPS-221ENST00000612683 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
FDPS-221ENST00000612683 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
FDPS-221ENST00000612683 ZC3H13Q5T200 1668 aaKnown RBP22.97■■□□□ 1.27
FDPS-221ENST00000612683 DISP3Q9P2K9 1392 aa22.96■■□□□ 1.27
FDPS-221ENST00000612683 DAPK1P53355 1430 aa22.96■■□□□ 1.27
FDPS-221ENST00000612683 POLR1AO95602 1720 aaPredicted RBP22.96■■□□□ 1.27
FDPS-221ENST00000612683 MROH1Q8NDA8 1641 aa22.94■■□□□ 1.26
FDPS-221ENST00000612683 NEURL4Q96JN8 1562 aa22.94■■□□□ 1.26
FDPS-221ENST00000612683 ERVK-7P63135 1459 aa22.94■■□□□ 1.26
FDPS-221ENST00000612683 SHANK2Q9UPX8 1470 aa22.94■■□□□ 1.26
FDPS-221ENST00000612683 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
FDPS-221ENST00000612683 CEP152O94986 1710 aa22.93■■□□□ 1.26
FDPS-221ENST00000612683 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
FDPS-221ENST00000612683 ERBINQ96RT1 1412 aa22.92■■□□□ 1.26
FDPS-221ENST00000612683 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
FDPS-221ENST00000612683 CROCC2H7BZ55 1655 aa22.9■■□□□ 1.26
FDPS-221ENST00000612683 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
FDPS-221ENST00000612683 KANK1Q14678 1352 aa22.89■■□□□ 1.26
FDPS-221ENST00000612683 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
FDPS-221ENST00000612683 MED14O60244 1454 aa22.88■■□□□ 1.25
FDPS-221ENST00000612683 TOM1O60784 492 aa22.87■■□□□ 1.25
FDPS-221ENST00000612683 CPS1P31327 1500 aa22.87■■□□□ 1.25
FDPS-221ENST00000612683 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
FDPS-221ENST00000612683 ARHGAP31Q2M1Z3 1444 aa22.86■■□□□ 1.25
FDPS-221ENST00000612683 PIP4K2BP78356 416 aa22.86■■□□□ 1.25
FDPS-221ENST00000612683 TXNDC2Q86VQ3 553 aa22.85■■□□□ 1.25
FDPS-221ENST00000612683 PRDM15P57071 1507 aaPredicted RBP22.84■■□□□ 1.25
FDPS-221ENST00000612683 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
FDPS-221ENST00000612683 ILDR2Q71H61 639 aa22.83■■□□□ 1.25
FDPS-221ENST00000612683 VWDEQ8N2E2 1590 aa22.82■■□□□ 1.24
FDPS-221ENST00000612683 LTKP29376 864 aa22.82■■□□□ 1.24
FDPS-221ENST00000612683 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
FDPS-221ENST00000612683 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
FDPS-221ENST00000612683 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
FDPS-221ENST00000612683 IDI1Q13907 227 aa22.79■■□□□ 1.24
FDPS-221ENST00000612683 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
FDPS-221ENST00000612683 HSPA1LP34931 641 aa22.76■■□□□ 1.23
FDPS-221ENST00000612683 ADGRL2O95490 1459 aa22.74■■□□□ 1.23
FDPS-221ENST00000612683 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
FDPS-221ENST00000612683 SLIT1O75093 1534 aa22.73■■□□□ 1.23
FDPS-221ENST00000612683 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
FDPS-221ENST00000612683 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
FDPS-221ENST00000612683 TMEM2Q9UHN6 1383 aa22.72■■□□□ 1.23
FDPS-221ENST00000612683 PIK3C2BO00750 1634 aa22.71■■□□□ 1.23
FDPS-221ENST00000612683 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
FDPS-221ENST00000612683 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
FDPS-221ENST00000612683 SLC52A1Q9NWF4 448 aa22.69■■□□□ 1.22
FDPS-221ENST00000612683 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
FDPS-221ENST00000612683 SOCS7O14512 581 aa22.67■■□□□ 1.22
FDPS-221ENST00000612683 EFCAB6Q5THR3 1501 aa22.67■■□□□ 1.22
FDPS-221ENST00000612683 NOS1P29475 1434 aa22.66■■□□□ 1.22
FDPS-221ENST00000612683 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
FDPS-221ENST00000612683 ITGAEP38570 1179 aa22.65■■□□□ 1.22
FDPS-221ENST00000612683 BCANQ96GW7 911 aa22.65■■□□□ 1.22
FDPS-221ENST00000612683 SYNMO15061 1565 aa22.64■■□□□ 1.22
FDPS-221ENST00000612683 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.21
FDPS-221ENST00000612683 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
FDPS-221ENST00000612683 ALKQ9UM73 1620 aa22.61■■□□□ 1.21
FDPS-221ENST00000612683 KCNA6P17658 529 aa22.6■■□□□ 1.21
FDPS-221ENST00000612683 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
FDPS-221ENST00000612683 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.21
FDPS-221ENST00000612683 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
FDPS-221ENST00000612683 PROSER2Q86WR7 435 aaPredicted RBP22.58■■□□□ 1.21
FDPS-221ENST00000612683 ROCK1Q13464 1354 aa22.58■■□□□ 1.21
FDPS-221ENST00000612683 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
FDPS-221ENST00000612683 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
FDPS-221ENST00000612683 TET3O43151 1660 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms