RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 MED14O60244 1454 aa16.23■□□□□ 0.19
PPARGC1A-216ENST00000612355 MBD5Q9P267 1494 aa16.23■□□□□ 0.19
PPARGC1A-216ENST00000612355 RTEL1-TNFRSF6BF6WH68 1400 aa16.23■□□□□ 0.19
PPARGC1A-216ENST00000612355 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
PPARGC1A-216ENST00000612355 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
PPARGC1A-216ENST00000612355 CFDP1Q9UEE9 299 aaPredicted RBP16.22■□□□□ 0.19
PPARGC1A-216ENST00000612355 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
PPARGC1A-216ENST00000612355 TNRQ92752 1358 aa16.22■□□□□ 0.19
PPARGC1A-216ENST00000612355 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
PPARGC1A-216ENST00000612355 PIP4K2BP78356 416 aa16.21■□□□□ 0.19
PPARGC1A-216ENST00000612355 DHX29Q7Z478 1369 aaKnown RBP16.2■□□□□ 0.18
PPARGC1A-216ENST00000612355 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
PPARGC1A-216ENST00000612355 SYNMO15061 1565 aa16.2■□□□□ 0.18
PPARGC1A-216ENST00000612355 IQGAP1P46940 1657 aa16.2■□□□□ 0.18
PPARGC1A-216ENST00000612355 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
PPARGC1A-216ENST00000612355 STRCP1A6NGW2 1772 aa16.19■□□□□ 0.18
PPARGC1A-216ENST00000612355 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
PPARGC1A-216ENST00000612355 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
PPARGC1A-216ENST00000612355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.18
PPARGC1A-216ENST00000612355 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
PPARGC1A-216ENST00000612355 MIA2Q96PC5 1412 aa16.15■□□□□ 0.18
PPARGC1A-216ENST00000612355 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
PPARGC1A-216ENST00000612355 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
PPARGC1A-216ENST00000612355 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
PPARGC1A-216ENST00000612355 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
PPARGC1A-216ENST00000612355 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
PPARGC1A-216ENST00000612355 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
PPARGC1A-216ENST00000612355 ZC3H13Q5T200 1668 aaKnown RBP16.13■□□□□ 0.17
PPARGC1A-216ENST00000612355 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
PPARGC1A-216ENST00000612355 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
PPARGC1A-216ENST00000612355 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
PPARGC1A-216ENST00000612355 KIF3BO15066 747 aa16.09■□□□□ 0.17
PPARGC1A-216ENST00000612355 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.17
PPARGC1A-216ENST00000612355 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
PPARGC1A-216ENST00000612355 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
PPARGC1A-216ENST00000612355 CAMSAP2Q08AD1 1489 aa16.07■□□□□ 0.16
PPARGC1A-216ENST00000612355 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
PPARGC1A-216ENST00000612355 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
PPARGC1A-216ENST00000612355 ABCC3O15438 1527 aa16.06■□□□□ 0.16
PPARGC1A-216ENST00000612355 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
PPARGC1A-216ENST00000612355 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
PPARGC1A-216ENST00000612355 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
PPARGC1A-216ENST00000612355 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
PPARGC1A-216ENST00000612355 MROH1Q8NDA8 1641 aa16.03■□□□□ 0.16
PPARGC1A-216ENST00000612355 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
PPARGC1A-216ENST00000612355 SLIT1O75093 1534 aa16.01■□□□□ 0.15
PPARGC1A-216ENST00000612355 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
PPARGC1A-216ENST00000612355 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
PPARGC1A-216ENST00000612355 NCOA2Q15596 1464 aa16■□□□□ 0.15
PPARGC1A-216ENST00000612355 CEP152O94986 1710 aa15.99■□□□□ 0.15
PPARGC1A-216ENST00000612355 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
PPARGC1A-216ENST00000612355 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
PPARGC1A-216ENST00000612355 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
PPARGC1A-216ENST00000612355 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
PPARGC1A-216ENST00000612355 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
PPARGC1A-216ENST00000612355 PRDM15P57071 1507 aaPredicted RBP15.93■□□□□ 0.14
PPARGC1A-216ENST00000612355 ARHGAP31Q2M1Z3 1444 aa15.93■□□□□ 0.14
PPARGC1A-216ENST00000612355 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
PPARGC1A-216ENST00000612355 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
PPARGC1A-216ENST00000612355 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
PPARGC1A-216ENST00000612355 LTKP29376 864 aa15.91■□□□□ 0.14
PPARGC1A-216ENST00000612355 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
PPARGC1A-216ENST00000612355 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
PPARGC1A-216ENST00000612355 POTEAQ6S8J7 498 aa15.9■□□□□ 0.14
PPARGC1A-216ENST00000612355 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
PPARGC1A-216ENST00000612355 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
PPARGC1A-216ENST00000612355 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
PPARGC1A-216ENST00000612355 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
PPARGC1A-216ENST00000612355 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
PPARGC1A-216ENST00000612355 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
PPARGC1A-216ENST00000612355 TET3O43151 1660 aa15.86■□□□□ 0.13
PPARGC1A-216ENST00000612355 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
PPARGC1A-216ENST00000612355 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
PPARGC1A-216ENST00000612355 EFCAB6Q5THR3 1501 aa15.84■□□□□ 0.13
PPARGC1A-216ENST00000612355 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
PPARGC1A-216ENST00000612355 EID1Q9Y6B2 187 aa15.83■□□□□ 0.12
PPARGC1A-216ENST00000612355 ERBINQ96RT1 1412 aa15.83■□□□□ 0.12
PPARGC1A-216ENST00000612355 KCNA6P17658 529 aa15.81■□□□□ 0.12
PPARGC1A-216ENST00000612355 COL16A1Q07092 1604 aaPredicted RBP15.8■□□□□ 0.12
PPARGC1A-216ENST00000612355 LMTK2Q8IWU2 1503 aa15.8■□□□□ 0.12
PPARGC1A-216ENST00000612355 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
PPARGC1A-216ENST00000612355 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
PPARGC1A-216ENST00000612355 JCADQ9P266 1359 aa15.78■□□□□ 0.12
PPARGC1A-216ENST00000612355 CHD2O14647 1828 aaKnown RBP15.78■□□□□ 0.12
PPARGC1A-216ENST00000612355 KIF15Q9NS87 1388 aa15.77■□□□□ 0.12
PPARGC1A-216ENST00000612355 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.12
PPARGC1A-216ENST00000612355 MSH6P52701 1360 aa15.75■□□□□ 0.11
PPARGC1A-216ENST00000612355 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
PPARGC1A-216ENST00000612355 NOS1P29475 1434 aa15.75■□□□□ 0.11
PPARGC1A-216ENST00000612355 FGD6Q6ZV73 1430 aa15.75■□□□□ 0.11
PPARGC1A-216ENST00000612355 LRP6O75581 1613 aa15.75■□□□□ 0.11
PPARGC1A-216ENST00000612355 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
PPARGC1A-216ENST00000612355 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
PPARGC1A-216ENST00000612355 AHDC1Q5TGY3 1603 aaPredicted RBP15.72■□□□□ 0.11
PPARGC1A-216ENST00000612355 ABCC5O15440 1437 aa15.72■□□□□ 0.11
PPARGC1A-216ENST00000612355 IDI1Q13907 227 aa15.72■□□□□ 0.11
PPARGC1A-216ENST00000612355 MYO5BQ9ULV0 1848 aa15.71■□□□□ 0.11
PPARGC1A-216ENST00000612355 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
PPARGC1A-216ENST00000612355 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
PPARGC1A-216ENST00000612355 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms