RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
PPARGC1A-216ENST00000612355 ABCC9O60706 1549 aa23.47■■□□□ 1.35
PPARGC1A-216ENST00000612355 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
PPARGC1A-216ENST00000612355 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
PPARGC1A-216ENST00000612355 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
PPARGC1A-216ENST00000612355 NACADO15069 1562 aa22■■□□□ 1.11
PPARGC1A-216ENST00000612355 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
PPARGC1A-216ENST00000612355 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
PPARGC1A-216ENST00000612355 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
PPARGC1A-216ENST00000612355 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
PPARGC1A-216ENST00000612355 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
PPARGC1A-216ENST00000612355 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
PPARGC1A-216ENST00000612355 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
PPARGC1A-216ENST00000612355 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
PPARGC1A-216ENST00000612355 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
PPARGC1A-216ENST00000612355 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
PPARGC1A-216ENST00000612355 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
PPARGC1A-216ENST00000612355 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
PPARGC1A-216ENST00000612355 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
PPARGC1A-216ENST00000612355 CUX2O14529 1486 aa20.5■□□□□ 0.87
PPARGC1A-216ENST00000612355 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
PPARGC1A-216ENST00000612355 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
PPARGC1A-216ENST00000612355 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
PPARGC1A-216ENST00000612355 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
PPARGC1A-216ENST00000612355 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
PPARGC1A-216ENST00000612355 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
PPARGC1A-216ENST00000612355 NESP48681 1621 aa20.05■□□□□ 0.8
PPARGC1A-216ENST00000612355 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
PPARGC1A-216ENST00000612355 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
PPARGC1A-216ENST00000612355 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
PPARGC1A-216ENST00000612355 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
PPARGC1A-216ENST00000612355 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
PPARGC1A-216ENST00000612355 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
PPARGC1A-216ENST00000612355 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
PPARGC1A-216ENST00000612355 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
PPARGC1A-216ENST00000612355 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
PPARGC1A-216ENST00000612355 WDR62O43379 1518 aa19.66■□□□□ 0.74
PPARGC1A-216ENST00000612355 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
PPARGC1A-216ENST00000612355 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
PPARGC1A-216ENST00000612355 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
PPARGC1A-216ENST00000612355 WIZO95785 1651 aa19.42■□□□□ 0.7
PPARGC1A-216ENST00000612355 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
PPARGC1A-216ENST00000612355 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
PPARGC1A-216ENST00000612355 CFTRP13569 1480 aa19.35■□□□□ 0.69
PPARGC1A-216ENST00000612355 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
PPARGC1A-216ENST00000612355 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
PPARGC1A-216ENST00000612355 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
PPARGC1A-216ENST00000612355 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
PPARGC1A-216ENST00000612355 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
PPARGC1A-216ENST00000612355 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
PPARGC1A-216ENST00000612355 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
PPARGC1A-216ENST00000612355 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
PPARGC1A-216ENST00000612355 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
PPARGC1A-216ENST00000612355 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
PPARGC1A-216ENST00000612355 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
PPARGC1A-216ENST00000612355 TOPBP1Q92547 1522 aa19■□□□□ 0.63
PPARGC1A-216ENST00000612355 CHD1O14646 1710 aa18.97■□□□□ 0.63
PPARGC1A-216ENST00000612355 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
PPARGC1A-216ENST00000612355 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
PPARGC1A-216ENST00000612355 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
PPARGC1A-216ENST00000612355 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
PPARGC1A-216ENST00000612355 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
PPARGC1A-216ENST00000612355 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
PPARGC1A-216ENST00000612355 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.66e-7■■■□□ 15.2
PPARGC1A-216ENST00000612355 POLA1P09884 1462 aaPredicted RBP18.78■□□□□ 0.6
PPARGC1A-216ENST00000612355 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
PPARGC1A-216ENST00000612355 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
PPARGC1A-216ENST00000612355 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
PPARGC1A-216ENST00000612355 FBLN2P98095 1184 aa18.68■□□□□ 0.58
PPARGC1A-216ENST00000612355 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
PPARGC1A-216ENST00000612355 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
PPARGC1A-216ENST00000612355 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
PPARGC1A-216ENST00000612355 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
PPARGC1A-216ENST00000612355 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
PPARGC1A-216ENST00000612355 SOGA1O94964 1423 aa18.62■□□□□ 0.57
PPARGC1A-216ENST00000612355 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
PPARGC1A-216ENST00000612355 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
PPARGC1A-216ENST00000612355 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
PPARGC1A-216ENST00000612355 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
PPARGC1A-216ENST00000612355 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
PPARGC1A-216ENST00000612355 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
PPARGC1A-216ENST00000612355 CUX1P39880 1505 aa18.52■□□□□ 0.56
PPARGC1A-216ENST00000612355 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
PPARGC1A-216ENST00000612355 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
PPARGC1A-216ENST00000612355 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
PPARGC1A-216ENST00000612355 ERCC6L2Q5T890 1561 aa18.37■□□□□ 0.53
PPARGC1A-216ENST00000612355 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
PPARGC1A-216ENST00000612355 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
PPARGC1A-216ENST00000612355 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
PPARGC1A-216ENST00000612355 NUP160Q12769 1436 aa18.32■□□□□ 0.52
PPARGC1A-216ENST00000612355 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
PPARGC1A-216ENST00000612355 KIF13AQ9H1H9 1805 aa18.31■□□□□ 0.52
PPARGC1A-216ENST00000612355 FHAD1B1AJZ9 1412 aa18.18■□□□□ 0.5
PPARGC1A-216ENST00000612355 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
PPARGC1A-216ENST00000612355 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
PPARGC1A-216ENST00000612355 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
PPARGC1A-216ENST00000612355 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
PPARGC1A-216ENST00000612355 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
PPARGC1A-216ENST00000612355 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
PPARGC1A-216ENST00000612355 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms