RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 CDC42BPAQ5VT25 1732 aa18.25■□□□□ 0.51
UBE2F-223ENST00000612130 PTPRGP23470 1445 aa18.25■□□□□ 0.51
UBE2F-223ENST00000612130 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
UBE2F-223ENST00000612130 NUP155O75694 1391 aa18.24■□□□□ 0.51
UBE2F-223ENST00000612130 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
UBE2F-223ENST00000612130 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
UBE2F-223ENST00000612130 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
UBE2F-223ENST00000612130 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
UBE2F-223ENST00000612130 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
UBE2F-223ENST00000612130 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
UBE2F-223ENST00000612130 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
UBE2F-223ENST00000612130 BLMP54132 1417 aaPredicted RBP18.22■□□□□ 0.51
UBE2F-223ENST00000612130 TRPM1Q7Z4N2 1603 aa18.21■□□□□ 0.51
UBE2F-223ENST00000612130 LAMC1P11047 1609 aa18.2■□□□□ 0.5
UBE2F-223ENST00000612130 NEFMP07197 916 aa18.2■□□□□ 0.5
UBE2F-223ENST00000612130 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
UBE2F-223ENST00000612130 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
UBE2F-223ENST00000612130 PLB1Q6P1J6 1458 aa18.19■□□□□ 0.5
UBE2F-223ENST00000612130 ZNF777Q9ULD5 760 aaPredicted RBP18.19■□□□□ 0.5
UBE2F-223ENST00000612130 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
UBE2F-223ENST00000612130 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
UBE2F-223ENST00000612130 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
UBE2F-223ENST00000612130 COL17A1Q9UMD9 1497 aaPredicted RBP18.17■□□□□ 0.5
UBE2F-223ENST00000612130 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
UBE2F-223ENST00000612130 ARHGEF5Q12774 1597 aa18.17■□□□□ 0.5
UBE2F-223ENST00000612130 LAS1LQ9Y4W2 734 aaKnown RBP18.16■□□□□ 0.5
UBE2F-223ENST00000612130 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
UBE2F-223ENST00000612130 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
UBE2F-223ENST00000612130 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
UBE2F-223ENST00000612130 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
UBE2F-223ENST00000612130 PRDM15P57071 1507 aaPredicted RBP18.12■□□□□ 0.49
UBE2F-223ENST00000612130 FAM135AQ9P2D6 1515 aa18.12■□□□□ 0.49
UBE2F-223ENST00000612130 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
UBE2F-223ENST00000612130 MAGI1Q96QZ7 1491 aaPredicted RBP18.11■□□□□ 0.49
UBE2F-223ENST00000612130 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
UBE2F-223ENST00000612130 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
UBE2F-223ENST00000612130 EIF2AK4Q9P2K8 1649 aaKnown RBP18.1■□□□□ 0.49
UBE2F-223ENST00000612130 ABCA8O94911 1581 aa18.1■□□□□ 0.49
UBE2F-223ENST00000612130 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
UBE2F-223ENST00000612130 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
UBE2F-223ENST00000612130 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
UBE2F-223ENST00000612130 SALL2Q9Y467 1007 aaPredicted RBP18.09■□□□□ 0.49
UBE2F-223ENST00000612130 CCDC144AA2RUR9 1427 aa18.09■□□□□ 0.49
UBE2F-223ENST00000612130 KDM2BQ8NHM5 1336 aa18.07■□□□□ 0.48
UBE2F-223ENST00000612130 UNC13BO14795 1591 aa18.06■□□□□ 0.48
UBE2F-223ENST00000612130 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
UBE2F-223ENST00000612130 A2MP01023 1474 aa18.05■□□□□ 0.48
UBE2F-223ENST00000612130 NUP160Q12769 1436 aa18.05■□□□□ 0.48
UBE2F-223ENST00000612130 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
UBE2F-223ENST00000612130 PLIN1O60240 522 aa18.05■□□□□ 0.48
UBE2F-223ENST00000612130 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
UBE2F-223ENST00000612130 ERBINQ96RT1 1412 aa18.04■□□□□ 0.48
UBE2F-223ENST00000612130 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
UBE2F-223ENST00000612130 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
UBE2F-223ENST00000612130 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
UBE2F-223ENST00000612130 TESK2Q96S53 571 aa18.02■□□□□ 0.48
UBE2F-223ENST00000612130 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
UBE2F-223ENST00000612130 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.48
UBE2F-223ENST00000612130 ATP10BO94823 1461 aa18.02■□□□□ 0.47
UBE2F-223ENST00000612130 GSE1Q14687 1217 aa18.01■□□□□ 0.47
UBE2F-223ENST00000612130 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
UBE2F-223ENST00000612130 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
UBE2F-223ENST00000612130 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
UBE2F-223ENST00000612130 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
UBE2F-223ENST00000612130 PREX2Q70Z35 1606 aa18■□□□□ 0.47
UBE2F-223ENST00000612130 SAMD9LQ8IVG5 1584 aa18■□□□□ 0.47
UBE2F-223ENST00000612130 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
UBE2F-223ENST00000612130 NFKBIBQ15653 356 aa17.99■□□□□ 0.47
UBE2F-223ENST00000612130 NBPF1Q3BBV0 1214 aa17.99■□□□□ 0.47
UBE2F-223ENST00000612130 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
UBE2F-223ENST00000612130 TMF1P82094 1093 aa17.98■□□□□ 0.47
UBE2F-223ENST00000612130 FAM161AQ3B820 660 aa17.98■□□□□ 0.47
UBE2F-223ENST00000612130 PANK3Q9H999 370 aa17.98■□□□□ 0.47
UBE2F-223ENST00000612130 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
UBE2F-223ENST00000612130 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
UBE2F-223ENST00000612130 ATP10AO60312 1499 aa17.97■□□□□ 0.47
UBE2F-223ENST00000612130 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
UBE2F-223ENST00000612130 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
UBE2F-223ENST00000612130 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
UBE2F-223ENST00000612130 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■■□□ 16.1
UBE2F-223ENST00000612130 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
UBE2F-223ENST00000612130 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
UBE2F-223ENST00000612130 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
UBE2F-223ENST00000612130 C8orf34Q49A92 452 aa17.94■□□□□ 0.46
UBE2F-223ENST00000612130 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
UBE2F-223ENST00000612130 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
UBE2F-223ENST00000612130 PLXNC1O60486 1568 aa17.94■□□□□ 0.46
UBE2F-223ENST00000612130 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
UBE2F-223ENST00000612130 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
UBE2F-223ENST00000612130 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
UBE2F-223ENST00000612130 ADAMTS8Q9UP79 889 aa17.92■□□□□ 0.46
UBE2F-223ENST00000612130 WDR7Q9Y4E6 1490 aa17.92■□□□□ 0.46
UBE2F-223ENST00000612130 SYNMO15061 1565 aa17.92■□□□□ 0.46
UBE2F-223ENST00000612130 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
UBE2F-223ENST00000612130 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
UBE2F-223ENST00000612130 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
UBE2F-223ENST00000612130 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
UBE2F-223ENST00000612130 WDR43Q15061 677 aaKnown RBP eCLIP17.9■□□□□ 0.46
UBE2F-223ENST00000612130 IQGAP1P46940 1657 aa17.89■□□□□ 0.46
UBE2F-223ENST00000612130 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms