RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
PRDM16-210ENST00000607632 KDM5DQ9BY66 1539 aa22.21■■□□□ 1.15
PRDM16-210ENST00000607632 MROH1Q8NDA8 1641 aa22.21■■□□□ 1.15
PRDM16-210ENST00000607632 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
PRDM16-210ENST00000607632 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
PRDM16-210ENST00000607632 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
PRDM16-210ENST00000607632 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
PRDM16-210ENST00000607632 UHRF1BP1Q6BDS2 1440 aa22.18■■□□□ 1.14
PRDM16-210ENST00000607632 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
PRDM16-210ENST00000607632 NCOA1Q15788 1441 aa22.17■■□□□ 1.14
PRDM16-210ENST00000607632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.16■■□□□ 1.14
PRDM16-210ENST00000607632 DEPDC5O75140 1603 aa22.15■■□□□ 1.14
PRDM16-210ENST00000607632 PRDM15P57071 1507 aaPredicted RBP22.15■■□□□ 1.14
PRDM16-210ENST00000607632 ANKRD30AQ9BXX3 1397 aa22.14■■□□□ 1.14
PRDM16-210ENST00000607632 ABCC3O15438 1527 aa22.13■■□□□ 1.13
PRDM16-210ENST00000607632 PZPP20742 1482 aa22.13■■□□□ 1.13
PRDM16-210ENST00000607632 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
PRDM16-210ENST00000607632 MYO3AQ8NEV4 1616 aa22.11■■□□□ 1.13
PRDM16-210ENST00000607632 HSPA2P54652 639 aa22.11■■□□□ 1.13
PRDM16-210ENST00000607632 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
PRDM16-210ENST00000607632 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
PRDM16-210ENST00000607632 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
PRDM16-210ENST00000607632 RRBP1Q9P2E9 1410 aaKnown RBP22.08■■□□□ 1.13
PRDM16-210ENST00000607632 STRCQ7RTU9 1775 aa22.07■■□□□ 1.12
PRDM16-210ENST00000607632 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
PRDM16-210ENST00000607632 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
PRDM16-210ENST00000607632 CEP152O94986 1710 aa22.06■■□□□ 1.12
PRDM16-210ENST00000607632 ROCK1Q13464 1354 aa22.06■■□□□ 1.12
PRDM16-210ENST00000607632 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
PRDM16-210ENST00000607632 CEP170BQ9Y4F5 1589 aaPredicted RBP22.05■■□□□ 1.12
PRDM16-210ENST00000607632 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
PRDM16-210ENST00000607632 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
PRDM16-210ENST00000607632 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
PRDM16-210ENST00000607632 ARHGAP31Q2M1Z3 1444 aa22.03■■□□□ 1.12
PRDM16-210ENST00000607632 ANKRD50Q9ULJ7 1429 aa22.01■■□□□ 1.11
PRDM16-210ENST00000607632 A2ML1A8K2U0 1454 aa22.01■■□□□ 1.11
PRDM16-210ENST00000607632 TNRQ92752 1358 aa22■■□□□ 1.11
PRDM16-210ENST00000607632 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
PRDM16-210ENST00000607632 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
PRDM16-210ENST00000607632 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
PRDM16-210ENST00000607632 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
PRDM16-210ENST00000607632 UNC13BO14795 1591 aa21.96■■□□□ 1.11
PRDM16-210ENST00000607632 FBXO41Q8TF61 875 aa21.95■■□□□ 1.1
PRDM16-210ENST00000607632 KANK1Q14678 1352 aa21.95■■□□□ 1.1
PRDM16-210ENST00000607632 PTPRTO14522 1441 aa21.94■■□□□ 1.1
PRDM16-210ENST00000607632 EFCAB6Q5THR3 1501 aa21.93■■□□□ 1.1
PRDM16-210ENST00000607632 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
PRDM16-210ENST00000607632 TET3O43151 1660 aa21.88■■□□□ 1.09
PRDM16-210ENST00000607632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
PRDM16-210ENST00000607632 UGGT1Q9NYU2 1555 aa21.87■■□□□ 1.09
PRDM16-210ENST00000607632 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
PRDM16-210ENST00000607632 IQGAP3Q86VI3 1631 aa21.87■■□□□ 1.09
PRDM16-210ENST00000607632 GCC2Q8IWJ2 1684 aa21.86■■□□□ 1.09
PRDM16-210ENST00000607632 RPRD2Q5VT52 1461 aaKnown RBP21.86■■□□□ 1.09
PRDM16-210ENST00000607632 NOS1P29475 1434 aa21.86■■□□□ 1.09
PRDM16-210ENST00000607632 PKD2Q13563 968 aa21.85■■□□□ 1.09
PRDM16-210ENST00000607632 POLR1AO95602 1720 aaPredicted RBP21.85■■□□□ 1.09
PRDM16-210ENST00000607632 UBR1Q8IWV7 1749 aa21.84■■□□□ 1.09
PRDM16-210ENST00000607632 SYNMO15061 1565 aa21.83■■□□□ 1.09
PRDM16-210ENST00000607632 KDM5AP29375 1690 aaKnown RBP21.83■■□□□ 1.09
PRDM16-210ENST00000607632 ITGAEP38570 1179 aa21.83■■□□□ 1.09
PRDM16-210ENST00000607632 NEURL4Q96JN8 1562 aa21.82■■□□□ 1.08
PRDM16-210ENST00000607632 NAIPQ13075 1403 aa21.82■■□□□ 1.08
PRDM16-210ENST00000607632 THEMISQ8N1K5 641 aaPredicted RBP21.8■■□□□ 1.08
PRDM16-210ENST00000607632 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
PRDM16-210ENST00000607632 PIK3C2BO00750 1634 aa21.79■■□□□ 1.08
PRDM16-210ENST00000607632 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
PRDM16-210ENST00000607632 E9PCH4 1651 aa21.79■■□□□ 1.08
PRDM16-210ENST00000607632 MED14O60244 1454 aa21.78■■□□□ 1.08
PRDM16-210ENST00000607632 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.08
PRDM16-210ENST00000607632 SLIT1O75093 1534 aa21.77■■□□□ 1.08
PRDM16-210ENST00000607632 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.07
PRDM16-210ENST00000607632 NUP155O75694 1391 aa21.74■■□□□ 1.07
PRDM16-210ENST00000607632 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
PRDM16-210ENST00000607632 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
PRDM16-210ENST00000607632 IDI1Q13907 227 aa21.71■■□□□ 1.07
PRDM16-210ENST00000607632 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
PRDM16-210ENST00000607632 CERKQ8TCT0 537 aa21.69■■□□□ 1.06
PRDM16-210ENST00000607632 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
PRDM16-210ENST00000607632 NPHP4O75161 1426 aaPredicted RBP21.68■■□□□ 1.06
PRDM16-210ENST00000607632 IQSEC2Q5JU85 1478 aa21.67■■□□□ 1.06
PRDM16-210ENST00000607632 SCAF11Q99590 1463 aaKnown RBP21.67■■□□□ 1.06
PRDM16-210ENST00000607632 TMEM2Q9UHN6 1383 aa21.67■■□□□ 1.06
PRDM16-210ENST00000607632 TMEM131LA2VDJ0 1609 aa21.66■■□□□ 1.06
PRDM16-210ENST00000607632 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
PRDM16-210ENST00000607632 ZNF335Q9H4Z2 1342 aaPredicted RBP21.63■■□□□ 1.05
PRDM16-210ENST00000607632 LTKP29376 864 aa21.62■■□□□ 1.05
PRDM16-210ENST00000607632 MYO5BQ9ULV0 1848 aa21.62■■□□□ 1.05
PRDM16-210ENST00000607632 ZFYVE9O95405 1425 aa21.59■■□□□ 1.05
PRDM16-210ENST00000607632 TXNDC2Q86VQ3 553 aa21.58■■□□□ 1.05
PRDM16-210ENST00000607632 CPS1P31327 1500 aa21.58■■□□□ 1.04
PRDM16-210ENST00000607632 TRPM2O94759 1503 aa21.57■■□□□ 1.04
PRDM16-210ENST00000607632 STAG3Q9UJ98 1225 aa21.57■■□□□ 1.04
PRDM16-210ENST00000607632 EID1Q9Y6B2 187 aa21.56■■□□□ 1.04
PRDM16-210ENST00000607632 STRCP1A6NGW2 1772 aa21.54■■□□□ 1.04
PRDM16-210ENST00000607632 CLTCL1P53675 1640 aa21.52■■□□□ 1.04
PRDM16-210ENST00000607632 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
PRDM16-210ENST00000607632 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
PRDM16-210ENST00000607632 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
PRDM16-210ENST00000607632 TRIM52Q96A61 297 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms