RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 PKD2Q13563 968 aa38.41■■■■□ 3.74
SNX5-219ENST00000606602 LTBP4Q8N2S1 1624 aa38.41■■■■□ 3.74
SNX5-219ENST00000606602 PLA2R1Q13018 1463 aa38.41■■■■□ 3.74
SNX5-219ENST00000606602 FBXO31Q5XUX0 539 aaPredicted RBP38.39■■■■□ 3.74
SNX5-219ENST00000606602 KDM5DQ9BY66 1539 aa38.38■■■■□ 3.74
SNX5-219ENST00000606602 A2ML1A8K2U0 1454 aa38.35■■■■□ 3.73
SNX5-219ENST00000606602 FAM135AQ9P2D6 1515 aa38.35■■■■□ 3.73
SNX5-219ENST00000606602 TNRQ92752 1358 aa38.34■■■■□ 3.73
SNX5-219ENST00000606602 MYOM3Q5VTT5 1437 aa38.34■■■■□ 3.73
SNX5-219ENST00000606602 TCOF1Q13428 1488 aaKnown RBP38.34■■■■□ 3.73
SNX5-219ENST00000606602 MIA2Q96PC5 1412 aa38.33■■■■□ 3.73
SNX5-219ENST00000606602 PZPP20742 1482 aa38.33■■■■□ 3.73
SNX5-219ENST00000606602 ZNF335Q9H4Z2 1342 aaPredicted RBP38.3■■■■□ 3.72
SNX5-219ENST00000606602 MAST1Q9Y2H9 1570 aa38.27■■■■□ 3.72
SNX5-219ENST00000606602 DNMT1P26358 1616 aaKnown RBP38.27■■■■□ 3.72
SNX5-219ENST00000606602 APLP2Q06481 763 aa38.26■■■■□ 3.72
SNX5-219ENST00000606602 IQSEC2Q5JU85 1478 aa38.26■■■■□ 3.72
SNX5-219ENST00000606602 RNF17Q9BXT8 1623 aaKnown RBP38.16■■■■□ 3.7
SNX5-219ENST00000606602 THEMISQ8N1K5 641 aaPredicted RBP38.14■■■■□ 3.7
SNX5-219ENST00000606602 NLRP1Q9C000 1473 aa38.14■■■■□ 3.7
SNX5-219ENST00000606602 ABCC3O15438 1527 aa38.13■■■■□ 3.69
SNX5-219ENST00000606602 EIF2AK4Q9P2K8 1649 aaKnown RBP38.12■■■■□ 3.69
SNX5-219ENST00000606602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.11■■■■□ 3.69
SNX5-219ENST00000606602 ANKLE2Q86XL3 938 aa38.1■■■■□ 3.69
SNX5-219ENST00000606602 DUOX2Q9NRD8 1548 aa38.09■■■■□ 3.69
SNX5-219ENST00000606602 UGGT1Q9NYU2 1555 aa38.07■■■■□ 3.69
SNX5-219ENST00000606602 ABCC5O15440 1437 aa38.07■■■■□ 3.69
SNX5-219ENST00000606602 UBAP1LF5GYI3 381 aa38.07■■■■□ 3.68
SNX5-219ENST00000606602 ZC3H13Q5T200 1668 aaKnown RBP38.07■■■■□ 3.68
SNX5-219ENST00000606602 KIF15Q9NS87 1388 aa38.06■■■■□ 3.68
SNX5-219ENST00000606602 RRP7BPQ9NSQ0 103 aa38.05■■■■□ 3.68
SNX5-219ENST00000606602 NEURL4Q96JN8 1562 aa38.05■■■■□ 3.68
SNX5-219ENST00000606602 PTPN23Q9H3S7 1636 aa38.05■■■■□ 3.68
SNX5-219ENST00000606602 MROH1Q8NDA8 1641 aa38.04■■■■□ 3.68
SNX5-219ENST00000606602 SHANK2Q9UPX8 1470 aa38.03■■■■□ 3.68
SNX5-219ENST00000606602 POLR1AO95602 1720 aaPredicted RBP38.03■■■■□ 3.68
SNX5-219ENST00000606602 SPATA31D1Q6ZQQ2 1576 aa38.01■■■■□ 3.67
SNX5-219ENST00000606602 DISP3Q9P2K9 1392 aa38■■■■□ 3.67
SNX5-219ENST00000606602 FGD6Q6ZV73 1430 aa38■■■■□ 3.67
SNX5-219ENST00000606602 ERVK-7P63135 1459 aa38■■■■□ 3.67
SNX5-219ENST00000606602 DAPK1P53355 1430 aa37.98■■■■□ 3.67
SNX5-219ENST00000606602 ERBINQ96RT1 1412 aa37.96■■■■□ 3.67
SNX5-219ENST00000606602 CROCC2H7BZ55 1655 aa37.95■■■■□ 3.67
SNX5-219ENST00000606602 NPHP4O75161 1426 aaPredicted RBP37.95■■■■□ 3.67
SNX5-219ENST00000606602 CEP152O94986 1710 aa37.93■■■■□ 3.66
SNX5-219ENST00000606602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.93■■■■□ 3.667e-14■□□□□ 10
SNX5-219ENST00000606602 MED14O60244 1454 aa37.91■■■■□ 3.66
SNX5-219ENST00000606602 CHIC2Q9UKJ5 165 aa37.91■■■■□ 3.66
SNX5-219ENST00000606602 CPS1P31327 1500 aa37.9■■■■□ 3.66
SNX5-219ENST00000606602 DEPDC5O75140 1603 aa37.9■■■■□ 3.66
SNX5-219ENST00000606602 PRDM15P57071 1507 aaPredicted RBP37.89■■■■□ 3.66
SNX5-219ENST00000606602 ANKRD30AQ9BXX3 1397 aa37.87■■■■□ 3.65
SNX5-219ENST00000606602 ARHGAP31Q2M1Z3 1444 aa37.86■■■■□ 3.65
SNX5-219ENST00000606602 KANK1Q14678 1352 aa37.84■■■■□ 3.65
SNX5-219ENST00000606602 VWDEQ8N2E2 1590 aa37.84■■■■□ 3.65
SNX5-219ENST00000606602 TOM1O60784 492 aa37.79■■■■□ 3.64
SNX5-219ENST00000606602 SCAF1Q9H7N4 1312 aaKnown RBP37.79■■■■□ 3.64
SNX5-219ENST00000606602 CFAP65Q6ZU64 1925 aaKnown RBP37.79■■■■□ 3.64
SNX5-219ENST00000606602 IQGAP1P46940 1657 aa37.79■■■■□ 3.64
SNX5-219ENST00000606602 PIP4K2BP78356 416 aa37.77■■■■□ 3.64
SNX5-219ENST00000606602 FAM50AQ14320 339 aaKnown RBP37.77■■■■□ 3.64
SNX5-219ENST00000606602 ILDR2Q71H61 639 aa37.77■■■■□ 3.64
SNX5-219ENST00000606602 UBR1Q8IWV7 1749 aa37.75■■■■□ 3.63
SNX5-219ENST00000606602 TXNDC2Q86VQ3 553 aa37.72■■■■□ 3.63
SNX5-219ENST00000606602 SCAF11Q99590 1463 aaKnown RBP37.71■■■■□ 3.63
SNX5-219ENST00000606602 LTKP29376 864 aa37.7■■■■□ 3.63
SNX5-219ENST00000606602 STAG3Q9UJ98 1225 aa37.68■■■■□ 3.62
SNX5-219ENST00000606602 ARHGAP23Q9P227 1491 aa37.68■■■■□ 3.62
SNX5-219ENST00000606602 LMTK2Q8IWU2 1503 aa37.67■■■■□ 3.62
SNX5-219ENST00000606602 ADGRL2O95490 1459 aa37.67■■■■□ 3.62
SNX5-219ENST00000606602 EID1Q9Y6B2 187 aa37.67■■■■□ 3.62
SNX5-219ENST00000606602 SLIT1O75093 1534 aa37.66■■■■□ 3.62
SNX5-219ENST00000606602 HSPA1LP34931 641 aa37.65■■■■□ 3.62
SNX5-219ENST00000606602 IDI1Q13907 227 aa37.62■■■■□ 3.61
SNX5-219ENST00000606602 PIK3C2BO00750 1634 aa37.61■■■■□ 3.61
SNX5-219ENST00000606602 LRRC7Q96NW7 1537 aa37.61■■■■□ 3.61
SNX5-219ENST00000606602 TMEM2Q9UHN6 1383 aa37.6■■■■□ 3.61
SNX5-219ENST00000606602 ANKRD50Q9ULJ7 1429 aa37.58■■■■□ 3.61
SNX5-219ENST00000606602 STRCP1A6NGW2 1772 aa37.57■■■■□ 3.61
SNX5-219ENST00000606602 EFCAB6Q5THR3 1501 aa37.56■■■■□ 3.6
SNX5-219ENST00000606602 NOS1P29475 1434 aa37.53■■■■□ 3.6
SNX5-219ENST00000606602 SOCS7O14512 581 aa37.53■■■■□ 3.6
SNX5-219ENST00000606602 SYNMO15061 1565 aa37.52■■■■□ 3.6
SNX5-219ENST00000606602 ALKQ9UM73 1620 aa37.5■■■■□ 3.59
SNX5-219ENST00000606602 SLC52A1Q9NWF4 448 aa37.48■■■■□ 3.59
SNX5-219ENST00000606602 KDM5AP29375 1690 aaKnown RBP37.47■■■■□ 3.59
SNX5-219ENST00000606602 RPRD2Q5VT52 1461 aaKnown RBP37.42■■■■□ 3.58
SNX5-219ENST00000606602 ADGRB3O60242 1522 aa37.41■■■■□ 3.58
SNX5-219ENST00000606602 SLC26A8Q96RN1 970 aa37.4■■■■□ 3.58
SNX5-219ENST00000606602 SENP3Q9H4L4 574 aaPredicted RBP37.4■■■■□ 3.58
SNX5-219ENST00000606602 ROCK1Q13464 1354 aa37.35■■■■□ 3.57
SNX5-219ENST00000606602 KCNA6P17658 529 aa37.34■■■■□ 3.57
SNX5-219ENST00000606602 BCANQ96GW7 911 aa37.34■■■■□ 3.57
SNX5-219ENST00000606602 TET3O43151 1660 aa37.34■■■■□ 3.57
SNX5-219ENST00000606602 MED1Q15648 1581 aaPredicted RBP37.34■■■■□ 3.57
SNX5-219ENST00000606602 PPARGC1BQ86YN6 1023 aaKnown RBP37.33■■■■□ 3.57
SNX5-219ENST00000606602 ITGAEP38570 1179 aa37.32■■■■□ 3.56
SNX5-219ENST00000606602 UNC13BO14795 1591 aa37.3■■■■□ 3.56
SNX5-219ENST00000606602 TMEM94Q12767 1356 aa37.29■■■■□ 3.56
SNX5-219ENST00000606602 PROSER2Q86WR7 435 aaPredicted RBP37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms