RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
HCG18-248ENST00000602861 NUP153P49790 1475 aaKnown RBP11.81□□□□□ -0.52
HCG18-248ENST00000602861 NEO1Q92859 1461 aa11.8□□□□□ -0.52
HCG18-248ENST00000602861 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
HCG18-248ENST00000602861 FRMPD1Q5SYB0 1578 aa11.77□□□□□ -0.53
HCG18-248ENST00000602861 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
HCG18-248ENST00000602861 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
HCG18-248ENST00000602861 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
HCG18-248ENST00000602861 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
HCG18-248ENST00000602861 PTPRMP28827 1452 aa11.75□□□□□ -0.53
HCG18-248ENST00000602861 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
HCG18-248ENST00000602861 ARID4BQ4LE39 1312 aaPredicted RBP11.74□□□□□ -0.53
HCG18-248ENST00000602861 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
HCG18-248ENST00000602861 ADAMTSL3P82987 1691 aa11.73□□□□□ -0.53
HCG18-248ENST00000602861 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
HCG18-248ENST00000602861 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
HCG18-248ENST00000602861 FANCAO15360 1455 aa11.72□□□□□ -0.53
HCG18-248ENST00000602861 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
HCG18-248ENST00000602861 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
HCG18-248ENST00000602861 MADDQ8WXG6 1647 aa11.71□□□□□ -0.53
HCG18-248ENST00000602861 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.53
HCG18-248ENST00000602861 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.53
HCG18-248ENST00000602861 BCORL1Q5H9F3 1711 aa11.71□□□□□ -0.54
HCG18-248ENST00000602861 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
HCG18-248ENST00000602861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
HCG18-248ENST00000602861 AKNAQ7Z591 1439 aa11.7□□□□□ -0.54
HCG18-248ENST00000602861 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
HCG18-248ENST00000602861 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
HCG18-248ENST00000602861 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
HCG18-248ENST00000602861 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
HCG18-248ENST00000602861 PSEN1P49768 467 aa11.68□□□□□ -0.54
HCG18-248ENST00000602861 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
HCG18-248ENST00000602861 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
HCG18-248ENST00000602861 RICTORQ6R327 1708 aa11.68□□□□□ -0.54
HCG18-248ENST00000602861 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
HCG18-248ENST00000602861 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
HCG18-248ENST00000602861 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
HCG18-248ENST00000602861 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
HCG18-248ENST00000602861 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.54
HCG18-248ENST00000602861 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
HCG18-248ENST00000602861 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
HCG18-248ENST00000602861 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
HCG18-248ENST00000602861 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
HCG18-248ENST00000602861 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
HCG18-248ENST00000602861 ATP1B4Q9UN42 357 aaPredicted RBP11.64□□□□□ -0.55
HCG18-248ENST00000602861 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
HCG18-248ENST00000602861 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
HCG18-248ENST00000602861 PLCH2O75038 1416 aa11.62□□□□□ -0.55
HCG18-248ENST00000602861 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
HCG18-248ENST00000602861 KANK4Q5T7N3 995 aaPredicted RBP11.62□□□□□ -0.55
HCG18-248ENST00000602861 MLECQ14165 292 aa11.61□□□□□ -0.55
HCG18-248ENST00000602861 FBXO41Q8TF61 875 aa11.61□□□□□ -0.55
HCG18-248ENST00000602861 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
HCG18-248ENST00000602861 SIGLEC1Q9BZZ2 1709 aa11.6□□□□□ -0.55
HCG18-248ENST00000602861 KIF14Q15058 1648 aa11.6□□□□□ -0.55
HCG18-248ENST00000602861 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
HCG18-248ENST00000602861 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
HCG18-248ENST00000602861 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
HCG18-248ENST00000602861 CDK11AQ9UQ88 783 aaPredicted RBP11.59□□□□□ -0.55
HCG18-248ENST00000602861 MYO5CQ9NQX4 1742 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 MAP3K13O43283 966 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 HSPA2P54652 639 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
HCG18-248ENST00000602861 ARHGAP5Q13017 1502 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
HCG18-248ENST00000602861 C9orf84Q5VXU9 1444 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 TIAM1Q13009 1591 aa11.58□□□□□ -0.56
HCG18-248ENST00000602861 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
HCG18-248ENST00000602861 ATP10AO60312 1499 aa11.57□□□□□ -0.56
HCG18-248ENST00000602861 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
HCG18-248ENST00000602861 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
HCG18-248ENST00000602861 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
HCG18-248ENST00000602861 ARHGEF12Q9NZN5 1544 aa11.55□□□□□ -0.56
HCG18-248ENST00000602861 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
HCG18-248ENST00000602861 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
HCG18-248ENST00000602861 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
HCG18-248ENST00000602861 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
HCG18-248ENST00000602861 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
HCG18-248ENST00000602861 KDM5CP41229 1560 aa11.53□□□□□ -0.56
HCG18-248ENST00000602861 NLRP6P59044 892 aa11.52□□□□□ -0.57
HCG18-248ENST00000602861 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
HCG18-248ENST00000602861 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
HCG18-248ENST00000602861 SOX12O15370 315 aa11.51□□□□□ -0.57
HCG18-248ENST00000602861 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
HCG18-248ENST00000602861 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
HCG18-248ENST00000602861 LRRIQ1Q96JM4 1722 aa11.5□□□□□ -0.57
HCG18-248ENST00000602861 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
HCG18-248ENST00000602861 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
HCG18-248ENST00000602861 ABCC1P33527 1531 aa11.5□□□□□ -0.57
HCG18-248ENST00000602861 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
HCG18-248ENST00000602861 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
HCG18-248ENST00000602861 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
HCG18-248ENST00000602861 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
HCG18-248ENST00000602861 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
HCG18-248ENST00000602861 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
HCG18-248ENST00000602861 PPP1R37O75864 691 aa11.48□□□□□ -0.57
HCG18-248ENST00000602861 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
HCG18-248ENST00000602861 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms