RNA–Protein interactions for RNA: ENST00000600229.5

CRB3-204, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-204ENST00000600229 PPP6R1Q9UPN7 881 aa26.48■■□□□ 1.83
CRB3-204ENST00000600229 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
CRB3-204ENST00000600229 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
CRB3-204ENST00000600229 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
CRB3-204ENST00000600229 FAM50AQ14320 339 aaKnown RBP26.45■■□□□ 1.82
CRB3-204ENST00000600229 NPATQ14207 1427 aa26.45■■□□□ 1.82
CRB3-204ENST00000600229 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
CRB3-204ENST00000600229 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
CRB3-204ENST00000600229 NCOA1Q15788 1441 aa26.42■■□□□ 1.82
CRB3-204ENST00000600229 PRDM15P57071 1507 aaPredicted RBP26.42■■□□□ 1.82
CRB3-204ENST00000600229 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
CRB3-204ENST00000600229 ANKRD30AQ9BXX3 1397 aa26.42■■□□□ 1.82
CRB3-204ENST00000600229 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
CRB3-204ENST00000600229 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
CRB3-204ENST00000600229 ABCC3O15438 1527 aa26.39■■□□□ 1.82
CRB3-204ENST00000600229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.38■■□□□ 1.81
CRB3-204ENST00000600229 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
CRB3-204ENST00000600229 MYO3AQ8NEV4 1616 aa26.38■■□□□ 1.81
CRB3-204ENST00000600229 CEP152O94986 1710 aa26.37■■□□□ 1.81
CRB3-204ENST00000600229 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
CRB3-204ENST00000600229 PZPP20742 1482 aa26.36■■□□□ 1.81
CRB3-204ENST00000600229 ZNF142P52746 1687 aaPredicted RBP26.36■■□□□ 1.81
CRB3-204ENST00000600229 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
CRB3-204ENST00000600229 HSPA2P54652 639 aa26.34■■□□□ 1.81
CRB3-204ENST00000600229 WASHC2CQ9Y4E1 1318 aa26.33■■□□□ 1.81
CRB3-204ENST00000600229 CAMSAP1Q5T5Y3 1602 aa26.32■■□□□ 1.8
CRB3-204ENST00000600229 ROCK1Q13464 1354 aa26.29■■□□□ 1.8
CRB3-204ENST00000600229 VWDEQ8N2E2 1590 aa26.29■■□□□ 1.8
CRB3-204ENST00000600229 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
CRB3-204ENST00000600229 STRCQ7RTU9 1775 aa26.26■■□□□ 1.79
CRB3-204ENST00000600229 ANKRD50Q9ULJ7 1429 aa26.26■■□□□ 1.79
CRB3-204ENST00000600229 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
CRB3-204ENST00000600229 LMTK2Q8IWU2 1503 aa26.24■■□□□ 1.79
CRB3-204ENST00000600229 TNRQ92752 1358 aa26.22■■□□□ 1.79
CRB3-204ENST00000600229 UNC13BO14795 1591 aa26.21■■□□□ 1.79
CRB3-204ENST00000600229 FBXO31Q5XUX0 539 aaPredicted RBP26.21■■□□□ 1.79
CRB3-204ENST00000600229 ERVK-7P63135 1459 aa26.21■■□□□ 1.79
CRB3-204ENST00000600229 A2ML1A8K2U0 1454 aa26.2■■□□□ 1.78
CRB3-204ENST00000600229 ARHGAP31Q2M1Z3 1444 aa26.2■■□□□ 1.78
CRB3-204ENST00000600229 KANK1Q14678 1352 aa26.18■■□□□ 1.78
CRB3-204ENST00000600229 EFCAB6Q5THR3 1501 aa26.17■■□□□ 1.78
CRB3-204ENST00000600229 NLRP1Q9C000 1473 aa26.17■■□□□ 1.78
CRB3-204ENST00000600229 ITGAEP38570 1179 aa26.15■■□□□ 1.78
CRB3-204ENST00000600229 PLA2R1Q13018 1463 aa26.15■■□□□ 1.78
CRB3-204ENST00000600229 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.78
CRB3-204ENST00000600229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.14■■□□□ 1.78
CRB3-204ENST00000600229 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
CRB3-204ENST00000600229 TET3O43151 1660 aa26.12■■□□□ 1.77
CRB3-204ENST00000600229 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
CRB3-204ENST00000600229 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
CRB3-204ENST00000600229 PTPRTO14522 1441 aa26.05■■□□□ 1.76
CRB3-204ENST00000600229 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
CRB3-204ENST00000600229 RPRD2Q5VT52 1461 aaKnown RBP26.04■■□□□ 1.76
CRB3-204ENST00000600229 SYNMO15061 1565 aa26.04■■□□□ 1.76
CRB3-204ENST00000600229 UBR1Q8IWV7 1749 aa26.04■■□□□ 1.76
CRB3-204ENST00000600229 NAIPQ13075 1403 aa26.04■■□□□ 1.76
CRB3-204ENST00000600229 NOS1P29475 1434 aa26.02■■□□□ 1.76
CRB3-204ENST00000600229 HFM1A2PYH4 1435 aa26.01■■□□□ 1.75
CRB3-204ENST00000600229 E9PCH4 1651 aa26■■□□□ 1.75
CRB3-204ENST00000600229 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
CRB3-204ENST00000600229 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
CRB3-204ENST00000600229 PIK3C2BO00750 1634 aa25.99■■□□□ 1.75
CRB3-204ENST00000600229 KDM5AP29375 1690 aaKnown RBP25.98■■□□□ 1.75
CRB3-204ENST00000600229 NCKAP5LQ9HCH0 1330 aa25.96■■□□□ 1.75
CRB3-204ENST00000600229 PKD2Q13563 968 aa25.96■■□□□ 1.75
CRB3-204ENST00000600229 NUP155O75694 1391 aa25.95■■□□□ 1.74
CRB3-204ENST00000600229 THEMISQ8N1K5 641 aaPredicted RBP25.92■■□□□ 1.74
CRB3-204ENST00000600229 ADGRB3O60242 1522 aa25.91■■□□□ 1.74
CRB3-204ENST00000600229 SLIT1O75093 1534 aa25.91■■□□□ 1.74
CRB3-204ENST00000600229 ARHGAP23Q9P227 1491 aa25.9■■□□□ 1.74
CRB3-204ENST00000600229 MED14O60244 1454 aa25.89■■□□□ 1.73
CRB3-204ENST00000600229 LTBP4Q8N2S1 1624 aa25.87■■□□□ 1.73
CRB3-204ENST00000600229 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
CRB3-204ENST00000600229 IDI1Q13907 227 aa25.85■■□□□ 1.73
CRB3-204ENST00000600229 SPHKAPQ2M3C7 1700 aa25.85■■□□□ 1.73
CRB3-204ENST00000600229 ANKLE2Q86XL3 938 aa25.84■■□□□ 1.73
CRB3-204ENST00000600229 SCAF11Q99590 1463 aaKnown RBP25.84■■□□□ 1.73
CRB3-204ENST00000600229 MYO5BQ9ULV0 1848 aa25.83■■□□□ 1.73
CRB3-204ENST00000600229 NPHP4O75161 1426 aaPredicted RBP25.82■■□□□ 1.72
CRB3-204ENST00000600229 SLC52A1Q9NWF4 448 aa25.82■■□□□ 1.72
CRB3-204ENST00000600229 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
CRB3-204ENST00000600229 TMEM2Q9UHN6 1383 aa25.81■■□□□ 1.72
CRB3-204ENST00000600229 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
CRB3-204ENST00000600229 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
CRB3-204ENST00000600229 STAG3Q9UJ98 1225 aa25.75■■□□□ 1.71
CRB3-204ENST00000600229 TRPM2O94759 1503 aa25.74■■□□□ 1.71
CRB3-204ENST00000600229 LTKP29376 864 aa25.74■■□□□ 1.71
CRB3-204ENST00000600229 ZFYVE9O95405 1425 aa25.72■■□□□ 1.71
CRB3-204ENST00000600229 ILDR1Q86SU0 546 aaPredicted RBP25.72■■□□□ 1.71
CRB3-204ENST00000600229 CLTCL1P53675 1640 aa25.71■■□□□ 1.71
CRB3-204ENST00000600229 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
CRB3-204ENST00000600229 TXNDC2Q86VQ3 553 aa25.69■■□□□ 1.7
CRB3-204ENST00000600229 FBXO41Q8TF61 875 aa25.69■■□□□ 1.7
CRB3-204ENST00000600229 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
CRB3-204ENST00000600229 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
CRB3-204ENST00000600229 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
CRB3-204ENST00000600229 SETD5Q9C0A6 1442 aa25.67■■□□□ 1.7
CRB3-204ENST00000600229 CPS1P31327 1500 aa25.67■■□□□ 1.7
CRB3-204ENST00000600229 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
CRB3-204ENST00000600229 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms