RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 ZNF142P52746 1687 aaPredicted RBP29.85■■■□□ 2.37
SNRPA-204ENST00000598452 WASHC2CQ9Y4E1 1318 aa29.84■■■□□ 2.37
SNRPA-204ENST00000598452 PLA2R1Q13018 1463 aa29.81■■■□□ 2.36
SNRPA-204ENST00000598452 KDM5DQ9BY66 1539 aa29.81■■■□□ 2.36
SNRPA-204ENST00000598452 PKD2Q13563 968 aa29.8■■■□□ 2.36
SNRPA-204ENST00000598452 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
SNRPA-204ENST00000598452 A2ML1A8K2U0 1454 aa29.79■■■□□ 2.36
SNRPA-204ENST00000598452 TNRQ92752 1358 aa29.78■■■□□ 2.36
SNRPA-204ENST00000598452 TCOF1Q13428 1488 aaKnown RBP29.78■■■□□ 2.36
SNRPA-204ENST00000598452 ZNF335Q9H4Z2 1342 aaPredicted RBP29.77■■■□□ 2.36
SNRPA-204ENST00000598452 PZPP20742 1482 aa29.77■■■□□ 2.36
SNRPA-204ENST00000598452 MIA2Q96PC5 1412 aa29.77■■■□□ 2.36
SNRPA-204ENST00000598452 FAM135AQ9P2D6 1515 aa29.75■■■□□ 2.35
SNRPA-204ENST00000598452 DNMT1P26358 1616 aaKnown RBP29.74■■■□□ 2.35
SNRPA-204ENST00000598452 MAST1Q9Y2H9 1570 aa29.73■■■□□ 2.35
SNRPA-204ENST00000598452 APLP2Q06481 763 aa29.7■■■□□ 2.35
SNRPA-204ENST00000598452 IQSEC2Q5JU85 1478 aa29.67■■■□□ 2.34
SNRPA-204ENST00000598452 RNF17Q9BXT8 1623 aaKnown RBP29.66■■■□□ 2.34
SNRPA-204ENST00000598452 ABCC3O15438 1527 aa29.64■■■□□ 2.34
SNRPA-204ENST00000598452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.33
SNRPA-204ENST00000598452 ABCC5O15440 1437 aa29.62■■■□□ 2.33
SNRPA-204ENST00000598452 NLRP1Q9C000 1473 aa29.6■■■□□ 2.33
SNRPA-204ENST00000598452 EIF2AK4Q9P2K8 1649 aaKnown RBP29.6■■■□□ 2.33
SNRPA-204ENST00000598452 THEMISQ8N1K5 641 aaPredicted RBP29.59■■■□□ 2.33
SNRPA-204ENST00000598452 RRP7BPQ9NSQ0 103 aa29.59■■■□□ 2.33
SNRPA-204ENST00000598452 DUOX2Q9NRD8 1548 aa29.59■■■□□ 2.33
SNRPA-204ENST00000598452 MROH1Q8NDA8 1641 aa29.59■■■□□ 2.33
SNRPA-204ENST00000598452 ANKLE2Q86XL3 938 aa29.58■■■□□ 2.33
SNRPA-204ENST00000598452 NEURL4Q96JN8 1562 aa29.58■■■□□ 2.33
SNRPA-204ENST00000598452 PTPN23Q9H3S7 1636 aa29.58■■■□□ 2.33
SNRPA-204ENST00000598452 KIF15Q9NS87 1388 aa29.57■■■□□ 2.32
SNRPA-204ENST00000598452 UGGT1Q9NYU2 1555 aa29.56■■■□□ 2.32
SNRPA-204ENST00000598452 UBAP1LF5GYI3 381 aa29.56■■■□□ 2.32
SNRPA-204ENST00000598452 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
SNRPA-204ENST00000598452 ZC3H13Q5T200 1668 aaKnown RBP29.54■■■□□ 2.32
SNRPA-204ENST00000598452 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
SNRPA-204ENST00000598452 SHANK2Q9UPX8 1470 aa29.54■■■□□ 2.32
SNRPA-204ENST00000598452 POLR1AO95602 1720 aaPredicted RBP29.54■■■□□ 2.32
SNRPA-204ENST00000598452 SPATA31D1Q6ZQQ2 1576 aa29.53■■■□□ 2.32
SNRPA-204ENST00000598452 DAPK1P53355 1430 aa29.53■■■□□ 2.32
SNRPA-204ENST00000598452 CROCC2H7BZ55 1655 aa29.5■■■□□ 2.31
SNRPA-204ENST00000598452 CHIC2Q9UKJ5 165 aa29.5■■■□□ 2.31
SNRPA-204ENST00000598452 CEP152O94986 1710 aa29.5■■■□□ 2.31
SNRPA-204ENST00000598452 DISP3Q9P2K9 1392 aa29.5■■■□□ 2.31
SNRPA-204ENST00000598452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.49■■■□□ 2.312e-9■■□□□ 11.9
SNRPA-204ENST00000598452 ERBINQ96RT1 1412 aa29.48■■■□□ 2.31
SNRPA-204ENST00000598452 NPHP4O75161 1426 aaPredicted RBP29.47■■■□□ 2.31
SNRPA-204ENST00000598452 MED14O60244 1454 aa29.44■■■□□ 2.3
SNRPA-204ENST00000598452 PRDM15P57071 1507 aaPredicted RBP29.44■■■□□ 2.3
SNRPA-204ENST00000598452 DEPDC5O75140 1603 aa29.42■■■□□ 2.3
SNRPA-204ENST00000598452 CPS1P31327 1500 aa29.41■■■□□ 2.3
SNRPA-204ENST00000598452 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
SNRPA-204ENST00000598452 ANKRD30AQ9BXX3 1397 aa29.4■■■□□ 2.3
SNRPA-204ENST00000598452 CFAP65Q6ZU64 1925 aaKnown RBP29.4■■■□□ 2.3
SNRPA-204ENST00000598452 ARHGAP31Q2M1Z3 1444 aa29.4■■■□□ 2.3
SNRPA-204ENST00000598452 ILDR2Q71H61 639 aa29.39■■■□□ 2.3
SNRPA-204ENST00000598452 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
SNRPA-204ENST00000598452 KANK1Q14678 1352 aa29.36■■■□□ 2.29
SNRPA-204ENST00000598452 IQGAP1P46940 1657 aa29.35■■■□□ 2.29
SNRPA-204ENST00000598452 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
SNRPA-204ENST00000598452 UBR1Q8IWV7 1749 aa29.34■■■□□ 2.29
SNRPA-204ENST00000598452 PIP4K2BP78356 416 aa29.34■■■□□ 2.29
SNRPA-204ENST00000598452 LTKP29376 864 aa29.32■■■□□ 2.28
SNRPA-204ENST00000598452 TOM1O60784 492 aa29.31■■■□□ 2.28
SNRPA-204ENST00000598452 TXNDC2Q86VQ3 553 aa29.31■■■□□ 2.28
SNRPA-204ENST00000598452 SCAF11Q99590 1463 aaKnown RBP29.29■■■□□ 2.28
SNRPA-204ENST00000598452 ADGRL2O95490 1459 aa29.28■■■□□ 2.28
SNRPA-204ENST00000598452 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
SNRPA-204ENST00000598452 SLIT1O75093 1534 aa29.26■■■□□ 2.27
SNRPA-204ENST00000598452 LMTK2Q8IWU2 1503 aa29.26■■■□□ 2.27
SNRPA-204ENST00000598452 HSPA1LP34931 641 aa29.26■■■□□ 2.27
SNRPA-204ENST00000598452 IDI1Q13907 227 aa29.25■■■□□ 2.27
SNRPA-204ENST00000598452 STAG3Q9UJ98 1225 aa29.25■■■□□ 2.27
SNRPA-204ENST00000598452 PIK3C2BO00750 1634 aa29.24■■■□□ 2.27
SNRPA-204ENST00000598452 STRCP1A6NGW2 1772 aa29.24■■■□□ 2.27
SNRPA-204ENST00000598452 EID1Q9Y6B2 187 aa29.23■■■□□ 2.27
SNRPA-204ENST00000598452 LRRC7Q96NW7 1537 aa29.22■■■□□ 2.27
SNRPA-204ENST00000598452 TMEM2Q9UHN6 1383 aa29.21■■■□□ 2.27
SNRPA-204ENST00000598452 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.27
SNRPA-204ENST00000598452 ALKQ9UM73 1620 aa29.19■■■□□ 2.26
SNRPA-204ENST00000598452 EFCAB6Q5THR3 1501 aa29.18■■■□□ 2.26
SNRPA-204ENST00000598452 NOS1P29475 1434 aa29.18■■■□□ 2.26
SNRPA-204ENST00000598452 SYNMO15061 1565 aa29.18■■■□□ 2.26
SNRPA-204ENST00000598452 SOCS7O14512 581 aa29.12■■■□□ 2.25
SNRPA-204ENST00000598452 PPARGC1BQ86YN6 1023 aaKnown RBP29.11■■■□□ 2.25
SNRPA-204ENST00000598452 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
SNRPA-204ENST00000598452 SLC52A1Q9NWF4 448 aa29.1■■■□□ 2.25
SNRPA-204ENST00000598452 KDM5AP29375 1690 aaKnown RBP29.07■■■□□ 2.24
SNRPA-204ENST00000598452 SLC26A8Q96RN1 970 aa29.07■■■□□ 2.24
SNRPA-204ENST00000598452 ADGRB3O60242 1522 aa29.06■■■□□ 2.24
SNRPA-204ENST00000598452 RPRD2Q5VT52 1461 aaKnown RBP29.05■■■□□ 2.24
SNRPA-204ENST00000598452 ITGAEP38570 1179 aa29.04■■■□□ 2.24
SNRPA-204ENST00000598452 ROCK1Q13464 1354 aa29.01■■■□□ 2.24
SNRPA-204ENST00000598452 TET3O43151 1660 aa29.01■■■□□ 2.23
SNRPA-204ENST00000598452 BCANQ96GW7 911 aa29■■■□□ 2.23
SNRPA-204ENST00000598452 UNC13BO14795 1591 aa29■■■□□ 2.23
SNRPA-204ENST00000598452 MED1Q15648 1581 aaPredicted RBP29■■■□□ 2.23
SNRPA-204ENST00000598452 KCNA6P17658 529 aa28.99■■■□□ 2.23
SNRPA-204ENST00000598452 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
SNRPA-204ENST00000598452 TMEM94Q12767 1356 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms